Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Phaseolus_20vulgaris_20[refseq_20GCF_5F000499845.1_202013-11-29]
708 sequences; 521,076,696 total letters
Query= NC_026440.1
Length=2243109
Score E
Sequences producing significant alignments: (Bits) Value
seq1 342 7e-88
>seq1
Length=52205531
Score = 342 bits (378), Expect = 7e-88
Identities = 405/544 (74%), Gaps = 10/544 (2%)
Strand=Plus/Plus
Query 1455734 AACCCGAACCGCTTTGTCCTGTTCCCCATCCGCTACCAGCGGATATGGGAAATGTACCAA 1455793
||||| ||||||| | ||||||| |||| |||| | ||||||||||||||| |
Sbjct 45626408 AACCCAGACCGCTTCTGCATGTTCCCAATCCAATACCCCCAAATATGGGAAATGTACAAG 45626467
Query 1455794 AAAGGCCGAGGCCTCCTTTTGGACCGCCGAGGAGGTCGACCTCGGCGCCGACACGGTCCA 1455853
|||| |||| ||||| || ||||||||||| ||||| ||||| | ||| |||
Sbjct 45626468 AAAG-CCGAAGCCTCTTTCTGGACCGCCGAAGAGGTTGACCTTTCCCAAGACCTCCGCCA 45626526
Query 1455854 CTGGGTGTCGCTGAGCGACGACGAGCGCCATTTCATCAAGCACGTCCTCGCCTTTTTTCG 1455913
||||| || || | ||||| ||||||||| ||||||| |||||||||||||| ||| |
Sbjct 45626527 CTGGGACTCCCTCACCGACGGCGAGCGCCACTTCATCACCCACGTCCTCGCCTTCTTT-G 45626585
Query 1455914 CCGCCAGCGATGGCATCGTGGCCGAGAACCTGGCCGGCCGCTTTATGAAAGAGGTCCAAT 1455973
||||| ||| || ||||| ||| ||||| |||| |||||| ||||| || |||||
Sbjct 45626586 CCGCCTCCGACGGTATCGTTCTCGAAAACCTCGCCGCCCGCTTCATGAAGGAAATCCAAG 45626645
Query 1455974 TGCCAGAGGCACGTTTGTTTTACGGGTTCCAGATCGCCATCGAAAACATCCACTCTGAAA 1456033
| | ||||| ||| || ||||| ||||||||||||||||| ||||||||||| || |
Sbjct 45626646 TCTCCGAGGCCCGTGCTTTCTACGGCTTCCAGATCGCCATCGAGAACATCCACTCCGAGA 45626705
Query 1456034 CCTACTCGCTCCTGATCGACACCTACGTCAAGGACCCGGTCGAGAAGGACCACCTCTTTC 1456093
||| ||||| | || |||||| |||| ||| | ||| ||| ||||||| || |
Sbjct 45626706 TGTACAGCCTCCTCTTGGAAACCTACATCAAAGACTCCACCGAAAAGAACCACCTGTTCC 45626765
Query 1456094 GCGCCATCGACACGGTGCCGTCGGTGAGGAAAAAGGCCGACTGGGCGATGAAGTGGATCA 1456153
| ||| | ||||| | || | || || ||||| | ||||| || ||||||
Sbjct 45626766 GTGCCGTAGACACCATCCCCTGCGTCGCCAAGAAGGCACAGTGGGCCTTGCGCTGGATC- 45626824
Query 1456154 ACAAGGAGGGCCTCGACACTTT-GCCGAGCGGCTCGTCGGCTTTGCC-GCGTCGAGGGCA 1456211
|| | | |||| |||| |||||||| |||||| ||| ||| |||||||||| |
Sbjct 45626825 -----GACGCCACCGACTCTTTCGCCGAGCGCATCGTCGCCTTCGCCTGCGTCGAGGGAA 45626879
Query 1456212 TCTTTTTCTCGGGCAGTTTCTGCGCCATCTTTTGGCTCAAGAAGCGCGGCCTCATGCCCG 1456271
|||| ||||| ||||| |||||| | || || ||||||||||||||||| | |||||||
Sbjct 45626880 TCTTCTTCTCTGGCAGCTTCTGCTCGATATTCTGGCTCAAGAAGCGCGGTTTGATGCCCG 45626939
Query 1456272 GTCT 1456275
||||
Sbjct 45626940 GTCT 45626943
Score = 309 bits (342), Expect = 4e-78
Identities = 412/561 (73%), Gaps = 15/561 (3%)
Strand=Plus/Minus
Query 1455753 TGTTCCCCATCCGCTACCAGCGGATATGGGAAATGTACCAAAAAGGCCGAGGCCTCCTTT 1455812
||||||| |||| |||| | || |||||||||||| | |||| | || ||||| ||
Sbjct 19483161 TGTTCCCAATCCAATACCCCCAAATCTGGGAAATGTACAAGAAAG-CTGAAGCCTCTTTC 19483103
Query 1455813 TGGACCGCCGAGGAGGTCGACCTCGGCGCCG-ACA--CGGTCCACTGGGTGTCGCTGAGC 1455869
||||| || ||||||||||||||| ||| | ||| ||| || |||| | | || | |
Sbjct 19483102 TGGACGGCGGAGGAGGTCGACCTCT-CGCAGGACATCCGG--CATTGGGAGACTCTAACC 19483046
Query 1455870 GACGACGAGCGCCATTTCATCAAGCACGTCCTCGCCTTTTTTCGCCGCCAGCGATGGCAT 1455929
|| | ||||||||||||||||| |||||||||||||| || ||||||| |||||||||
Sbjct 19483045 GATGGCGAGCGCCATTTCATCACCCACGTCCTCGCCTTCTT-CGCCGCCTCCGATGGCAT 19482987
Query 1455930 CGTGGCCGAGAACCTGGCCGGCCGCTTTATGAAAGAGGTCCAATTGCCAGAGGCACGTTT 1455989
||| || ||||| |||||||| || ||||| |||||||| | | ||||| ||
Sbjct 19482986 CGTCCTTGAAAACCTTGCCGGCCGTTTCATGAAGGAGGTCCAGGTCTCCGAGGCCCGCGC 19482927
Query 1455990 GTTTTACGGGTTCCAGATCGCCATCGAAAACATCCACTCTGAAACCTACTCGCTCCTGAT 1456049
|| ||||| || |||||||||||||| ||||| ||||| || | ||| ||||| |
Sbjct 19482926 CTTCTACGGCTTTCAGATCGCCATCGAGAACATTCACTCCGAGATGTACAGCCTCCTCCT 19482867
Query 1456050 CGACACCTACGTCAAGGACCCGGTCGAGAAGGACCACCTCTTTCGCGCCATCGACACGGT 1456109
|| |||||| | || ||| | |||||| || ||||| | |||||| ||||| |
Sbjct 19482866 TGAAACCTACATAAAAGACTCCAAAGAGAAGACCCGTCTCTTCCACGCCATTGACACTAT 19482807
Query 1456110 GCCGTCGGTGAGGAAAAAGGCCGACTGGGCGATGAAGTGGATCAACAAGGAGGGCCTCGA 1456169
|| | || | || ||||| ||||||| | |||||| || ||| |
Sbjct 19482806 TCCCTGCGTCACCAAGAAGGCTAACTGGGCCCTACGCTGGATCGAC----TCCGCCGAGT 19482751
Query 1456170 CACTTTGCCGAGCGGCTCGTCGGCTTTGCC-GCGTCGAGGGCATCTTTTTCTCGGGCAGT 1456228
| ||| |||||||| |||| | ||| ||| |||||||||| ||||| ||||| || ||
Sbjct 19482750 C-CTTCGCCGAGCGCATCGTTGCCTTCGCCTGCGTCGAGGGAATCTTCTTCTCCGGAAGC 19482692
Query 1456229 TTCTGCGCCATCTTTTGGCTCAAGAAGCGCGGCCTCATGCCCGGTCTTCTGCTTTAGCAA 1456288
|| ||| | ||||| |||||||||||||| ||||||||||| || ||| ||| |||
Sbjct 19482691 TTTTGCTCTATCTTCTGGCTCAAGAAGCGAGGCCTCATGCCGGGACTT-ACCTTCTCCAA 19482633
Query 1456289 CGAATTTATCAGTCGCGACGA 1456309
|||| | ||| ||||||||
Sbjct 19482632 CGAACTCATCTCCCGCGACGA 19482612
Score = 109 bits (120), Expect = 8e-18
Identities = 224/325 (69%), Gaps = 10/325 (3%)
Strand=Plus/Minus
Query 1456454 CACTGTGACTTTGCCTGTCTGCTCTACACGATGCTCGTCAACAAGCCGTCGACCGACGTG 1456513
||||| ||||| || || ||||||||| | || | ||||||| || |||| | |
Sbjct 19482604 CACTGCGACTTCGCGTGCCTGCTCTACTCTATCATGCGGAACAAGC--TCC-CCGAGGAG 19482548
Query 1456514 CCC---AAGCAGATCATCGTCGAGGCCGTCGAGATCGAGAAAGAGTTTGTCAGCGAGTCG 1456570
| | | | ||||| | ||| || || || ||||||| ||||||||| |||| ||
Sbjct 19482547 CGCGTGAGGGAGATCGTGCGCGATGCAGTTGACATCGAGAGGGAGTTTGTCTGCGACGCG 19482488
Query 1456571 CTGCCGGTGGCGCTCATCGGCATGAACGCCACCGCTCATGTGCCAGTACATTGAATTTTG 1456630
|| || ||| | | || ||||||| || | ||| | ||||||||| ||| |
Sbjct 19482487 CTTCCTTGCGCGTTGGTGGGGATGAACGGGGCCT-TGATGAGTGTGTACATTGAGTTT-G 19482430
Query 1456631 TCGCCGACCGCCTGCTCGCGGCGCTCGGCTGCGGAGAAGCACTACCGGACGGCCAACCCG 1456690
| || || | |||||| ||||| || ||||| ||||| ||| | ||||||
Sbjct 19482429 TTGCTGATAGGTTGCTCGGTGCGCTTGGGTGCGG-GAAGCTGTACAATGTGCAGAACCCG 19482371
Query 1456691 TTCCCATGGATGGAGTTGATCTCGCTCGAGGGCAAGACCAACTTTTTCGAGCGCCGCGT- 1456749
||| ||||||||| | || ||||| |||| ||||||||||| |||||| |||||
Sbjct 19482370 TTCGATTGGATGGAGCTTATTTCGCTGCAGGGGAAGACCAACTTCTTCGAGAAGCGCGTG 19482311
Query 1456750 GGCGAGTACGCCAAGGCCGGCGTCA 1456774
|| |||||| ||||| |||||
Sbjct 19482310 GGGGAGTACCAGAAGGCTTCCGTCA 19482286
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 7177742912098696
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