Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phaseolus_20vulgaris_20[refseq_20GCF_5F000499845.1_202013-11-29] 708 sequences; 521,076,696 total letters Query= NC_026440.1 Length=2243109 Score E Sequences producing significant alignments: (Bits) Value seq1 342 7e-88 >seq1 Length=52205531 Score = 342 bits (378), Expect = 7e-88 Identities = 405/544 (74%), Gaps = 10/544 (2%) Strand=Plus/Plus Query 1455734 AACCCGAACCGCTTTGTCCTGTTCCCCATCCGCTACCAGCGGATATGGGAAATGTACCAA 1455793 ||||| ||||||| | ||||||| |||| |||| | ||||||||||||||| | Sbjct 45626408 AACCCAGACCGCTTCTGCATGTTCCCAATCCAATACCCCCAAATATGGGAAATGTACAAG 45626467 Query 1455794 AAAGGCCGAGGCCTCCTTTTGGACCGCCGAGGAGGTCGACCTCGGCGCCGACACGGTCCA 1455853 |||| |||| ||||| || ||||||||||| ||||| ||||| | ||| ||| Sbjct 45626468 AAAG-CCGAAGCCTCTTTCTGGACCGCCGAAGAGGTTGACCTTTCCCAAGACCTCCGCCA 45626526 Query 1455854 CTGGGTGTCGCTGAGCGACGACGAGCGCCATTTCATCAAGCACGTCCTCGCCTTTTTTCG 1455913 ||||| || || | ||||| ||||||||| ||||||| |||||||||||||| ||| | Sbjct 45626527 CTGGGACTCCCTCACCGACGGCGAGCGCCACTTCATCACCCACGTCCTCGCCTTCTTT-G 45626585 Query 1455914 CCGCCAGCGATGGCATCGTGGCCGAGAACCTGGCCGGCCGCTTTATGAAAGAGGTCCAAT 1455973 ||||| ||| || ||||| ||| ||||| |||| |||||| ||||| || ||||| Sbjct 45626586 CCGCCTCCGACGGTATCGTTCTCGAAAACCTCGCCGCCCGCTTCATGAAGGAAATCCAAG 45626645 Query 1455974 TGCCAGAGGCACGTTTGTTTTACGGGTTCCAGATCGCCATCGAAAACATCCACTCTGAAA 1456033 | | ||||| ||| || ||||| ||||||||||||||||| ||||||||||| || | Sbjct 45626646 TCTCCGAGGCCCGTGCTTTCTACGGCTTCCAGATCGCCATCGAGAACATCCACTCCGAGA 45626705 Query 1456034 CCTACTCGCTCCTGATCGACACCTACGTCAAGGACCCGGTCGAGAAGGACCACCTCTTTC 1456093 ||| ||||| | || |||||| |||| ||| | ||| ||| ||||||| || | Sbjct 45626706 TGTACAGCCTCCTCTTGGAAACCTACATCAAAGACTCCACCGAAAAGAACCACCTGTTCC 45626765 Query 1456094 GCGCCATCGACACGGTGCCGTCGGTGAGGAAAAAGGCCGACTGGGCGATGAAGTGGATCA 1456153 | ||| | ||||| | || | || || ||||| | ||||| || |||||| Sbjct 45626766 GTGCCGTAGACACCATCCCCTGCGTCGCCAAGAAGGCACAGTGGGCCTTGCGCTGGATC- 45626824 Query 1456154 ACAAGGAGGGCCTCGACACTTT-GCCGAGCGGCTCGTCGGCTTTGCC-GCGTCGAGGGCA 1456211 || | | |||| |||| |||||||| |||||| ||| ||| |||||||||| | Sbjct 45626825 -----GACGCCACCGACTCTTTCGCCGAGCGCATCGTCGCCTTCGCCTGCGTCGAGGGAA 45626879 Query 1456212 TCTTTTTCTCGGGCAGTTTCTGCGCCATCTTTTGGCTCAAGAAGCGCGGCCTCATGCCCG 1456271 |||| ||||| ||||| |||||| | || || ||||||||||||||||| | ||||||| Sbjct 45626880 TCTTCTTCTCTGGCAGCTTCTGCTCGATATTCTGGCTCAAGAAGCGCGGTTTGATGCCCG 45626939 Query 1456272 GTCT 1456275 |||| Sbjct 45626940 GTCT 45626943 Score = 309 bits (342), Expect = 4e-78 Identities = 412/561 (73%), Gaps = 15/561 (3%) Strand=Plus/Minus Query 1455753 TGTTCCCCATCCGCTACCAGCGGATATGGGAAATGTACCAAAAAGGCCGAGGCCTCCTTT 1455812 ||||||| |||| |||| | || |||||||||||| | |||| | || ||||| || Sbjct 19483161 TGTTCCCAATCCAATACCCCCAAATCTGGGAAATGTACAAGAAAG-CTGAAGCCTCTTTC 19483103 Query 1455813 TGGACCGCCGAGGAGGTCGACCTCGGCGCCG-ACA--CGGTCCACTGGGTGTCGCTGAGC 1455869 ||||| || ||||||||||||||| ||| | ||| ||| || |||| | | || | | Sbjct 19483102 TGGACGGCGGAGGAGGTCGACCTCT-CGCAGGACATCCGG--CATTGGGAGACTCTAACC 19483046 Query 1455870 GACGACGAGCGCCATTTCATCAAGCACGTCCTCGCCTTTTTTCGCCGCCAGCGATGGCAT 1455929 || | ||||||||||||||||| |||||||||||||| || ||||||| ||||||||| Sbjct 19483045 GATGGCGAGCGCCATTTCATCACCCACGTCCTCGCCTTCTT-CGCCGCCTCCGATGGCAT 19482987 Query 1455930 CGTGGCCGAGAACCTGGCCGGCCGCTTTATGAAAGAGGTCCAATTGCCAGAGGCACGTTT 1455989 ||| || ||||| |||||||| || ||||| |||||||| | | ||||| || Sbjct 19482986 CGTCCTTGAAAACCTTGCCGGCCGTTTCATGAAGGAGGTCCAGGTCTCCGAGGCCCGCGC 19482927 Query 1455990 GTTTTACGGGTTCCAGATCGCCATCGAAAACATCCACTCTGAAACCTACTCGCTCCTGAT 1456049 || ||||| || |||||||||||||| ||||| ||||| || | ||| ||||| | Sbjct 19482926 CTTCTACGGCTTTCAGATCGCCATCGAGAACATTCACTCCGAGATGTACAGCCTCCTCCT 19482867 Query 1456050 CGACACCTACGTCAAGGACCCGGTCGAGAAGGACCACCTCTTTCGCGCCATCGACACGGT 1456109 || |||||| | || ||| | |||||| || ||||| | |||||| ||||| | Sbjct 19482866 TGAAACCTACATAAAAGACTCCAAAGAGAAGACCCGTCTCTTCCACGCCATTGACACTAT 19482807 Query 1456110 GCCGTCGGTGAGGAAAAAGGCCGACTGGGCGATGAAGTGGATCAACAAGGAGGGCCTCGA 1456169 || | || | || ||||| ||||||| | |||||| || ||| | Sbjct 19482806 TCCCTGCGTCACCAAGAAGGCTAACTGGGCCCTACGCTGGATCGAC----TCCGCCGAGT 19482751 Query 1456170 CACTTTGCCGAGCGGCTCGTCGGCTTTGCC-GCGTCGAGGGCATCTTTTTCTCGGGCAGT 1456228 | ||| |||||||| |||| | ||| ||| |||||||||| ||||| ||||| || || Sbjct 19482750 C-CTTCGCCGAGCGCATCGTTGCCTTCGCCTGCGTCGAGGGAATCTTCTTCTCCGGAAGC 19482692 Query 1456229 TTCTGCGCCATCTTTTGGCTCAAGAAGCGCGGCCTCATGCCCGGTCTTCTGCTTTAGCAA 1456288 || ||| | ||||| |||||||||||||| ||||||||||| || ||| ||| ||| Sbjct 19482691 TTTTGCTCTATCTTCTGGCTCAAGAAGCGAGGCCTCATGCCGGGACTT-ACCTTCTCCAA 19482633 Query 1456289 CGAATTTATCAGTCGCGACGA 1456309 |||| | ||| |||||||| Sbjct 19482632 CGAACTCATCTCCCGCGACGA 19482612 Score = 109 bits (120), Expect = 8e-18 Identities = 224/325 (69%), Gaps = 10/325 (3%) Strand=Plus/Minus Query 1456454 CACTGTGACTTTGCCTGTCTGCTCTACACGATGCTCGTCAACAAGCCGTCGACCGACGTG 1456513 ||||| ||||| || || ||||||||| | || | ||||||| || |||| | | Sbjct 19482604 CACTGCGACTTCGCGTGCCTGCTCTACTCTATCATGCGGAACAAGC--TCC-CCGAGGAG 19482548 Query 1456514 CCC---AAGCAGATCATCGTCGAGGCCGTCGAGATCGAGAAAGAGTTTGTCAGCGAGTCG 1456570 | | | | ||||| | ||| || || || ||||||| ||||||||| |||| || Sbjct 19482547 CGCGTGAGGGAGATCGTGCGCGATGCAGTTGACATCGAGAGGGAGTTTGTCTGCGACGCG 19482488 Query 1456571 CTGCCGGTGGCGCTCATCGGCATGAACGCCACCGCTCATGTGCCAGTACATTGAATTTTG 1456630 || || ||| | | || ||||||| || | ||| | ||||||||| ||| | Sbjct 19482487 CTTCCTTGCGCGTTGGTGGGGATGAACGGGGCCT-TGATGAGTGTGTACATTGAGTTT-G 19482430 Query 1456631 TCGCCGACCGCCTGCTCGCGGCGCTCGGCTGCGGAGAAGCACTACCGGACGGCCAACCCG 1456690 | || || | |||||| ||||| || ||||| ||||| ||| | |||||| Sbjct 19482429 TTGCTGATAGGTTGCTCGGTGCGCTTGGGTGCGG-GAAGCTGTACAATGTGCAGAACCCG 19482371 Query 1456691 TTCCCATGGATGGAGTTGATCTCGCTCGAGGGCAAGACCAACTTTTTCGAGCGCCGCGT- 1456749 ||| ||||||||| | || ||||| |||| ||||||||||| |||||| ||||| Sbjct 19482370 TTCGATTGGATGGAGCTTATTTCGCTGCAGGGGAAGACCAACTTCTTCGAGAAGCGCGTG 19482311 Query 1456750 GGCGAGTACGCCAAGGCCGGCGTCA 1456774 || |||||| ||||| ||||| Sbjct 19482310 GGGGAGTACCAGAAGGCTTCCGTCA 19482286 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7177742912098696