Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phaseolus_20vulgaris_20[refseq_20GCF_5F000499845.1_202013-11-29] 708 sequences; 521,076,696 total letters Query= NC_026926.1 Length=192108 Score E Sequences producing significant alignments: (Bits) Value seq6 210 3e-49 seq9 170 2e-37 seq2 161 1e-34 seq1 150 2e-31 seq8 120 4e-22 seq4 102 1e-16 seq11 100 3e-16 >seq6 Length=31977256 Score = 210 bits (232), Expect = 3e-49 Identities = 482/717 (67%), Gaps = 23/717 (3%) Strand=Plus/Plus Query 182649 TGGAATTTCGTGGCTCTCCACGGTGCCTTCGCTCTCATTGGTTTCATGCTTAGGCAATTT 182708 |||| ||| || | |||||| ||||| || | | || ||| |||| | |||| | Sbjct 21888305 TGGACTTTTGTTGTTCTCCATGGTGCTTTTGGATTAATACGTTCCATGTTACATCAATCT 21888364 Query 182709 GAACTTGCTCGCCTGATTGGAATCAGACCTTACAAT---GCGATTGCTTTTTCTGGTCCT 182765 |||||||||| | || | | |||||| ||| | ||||| || || ||||| Sbjct 21888365 GAACTTGCTCAATTTTTTCAATTACAACCTTATAATAATGTAATTGCATTCTCAGGTCCA 21888424 Query 182766 ATTGCTGTATTCGTCAGTGTGTTCCTCATCTATCCTTTGGGACAGTCCTCTTGGTTTTTC 182825 |||| | | || || ||| ||||| || ||||| |||| |||| ||| || || Sbjct 21888425 ATTGTTATTTTTGTTTATGTATTCCTTATTTATCCACTGGGTCAGTTTGGTTGATTCTTT 21888484 Query 182826 GCGCCGTCCTTTGGTGTCGCGGCGA-TCTTCAGGT--TCCTGTTGTTCCTTCAGGGTTTC 182882 || || ||| || || || | | |||| | || | || |||| | | |||| Sbjct 21888485 GCTCCTAGTTTTAATGGAGCAGCTAATTTTCAAATCATCATATTTTTCCA--AAGATTTC 21888542 Query 182883 CACAACTGGACACTCAACCCCTTCCATATGATGGGAGTTGCTGGTATACTGGGTGGAGCA 182942 | | |||||| | ||||| || |||||| ||||||||| | || |||||| ||| Sbjct 21888543 -ATACTTGGACATTAAACCCATTTCATATGCTGGGAGTTGTCATTGTATTGGGTGTTGCA 21888601 Query 182943 CTGCTCAGTGCTATCCATGGTGTCACAGTAGAGAATACCTTGTATGAAGATGGAGAACAG 183002 || || | ||||| ||||||| || ||||| | ||| || | ||||||||| || Sbjct 21888602 CTACTATGCGCTATTCATGGTGCAACGGTAGAAAGTACTTTATTTGAAGATGGTGATGGT 21888661 Query 183003 GCAAACACATTTAAAGCGTTCGATTCCACTCAGGAGGAGGAGA-CCTATTCGATGGTTAC 183061 | ||| |||||| || || | | || || || | | ||||||| ||| |||| Sbjct 21888662 GAAAATACATTTTGTGCTTTTAACCCAACCCAACCCGAAAAAAACCTATTCAATGATTAC 21888721 Query 183062 AGCGAATCGTTTTTGGTCACAAATCTTCGGGGTTGCGTTTAGC-AATAAGCGTTGGTTGC 183120 | ||||| |||||||| |||||||| ||||||| ||| | ||||||| |||||| | Sbjct 21888722 TGTTAATCGCTTTTGGTCCCAAATCTTTGGGGTTGTTTTTCTCTAATAAGCATTGGTTAC 21888781 Query 183121 ACTTCTTTATGTTGTTTGTTCCTGTCATGGGTCTTTGGGTCTCTTCTATTGGGATCATTG 183180 | || |||||||||||||| || || | || | || | | | ||||||| ||| Sbjct 21888782 ATTTATTTATGTTGTTTGTACCAGTAACTCGTTTATGAATGAGTGTTCTTGGGATAGTTG 21888841 Query 183181 GGCTTGCTCTT-AATCTTCGTGCTTATGATTTTGTGAGTCAAGAGATTAGAGCAGCAGAA 183239 | | | ||| || || |||||||||||||| || |||||| || | ||| ||| Sbjct 21888842 GT-TCGTCCTTGAACCTACGTGCTTATGATTTCGTTTCTCAAGAAATCTGTGCAATAGA- 21888899 Query 183240 GATCCTGAGTTCGAGACGTTCTACACAAAGAACATCCTTCTCAATGAAGGACTACGTGCT 183299 || |||| || ||||| || || || | | || ||||| | ||||| Sbjct 21888900 ---------TTTAAGACTTTATACACTAAAAATATTTTCTTAAACGAAGGTATTCGTGCA 21888950 Query 183300 TGGTTGGCACCTGCCGATCAACCACATGAAAACTTCATCTTCCCTGAAGAAGTTCTA 183356 ||| || || || |||| | ||||||||||| || |||| |||||| |||||| Sbjct 21888951 TGGATGACAACTCAAAATCAGTCTCATGAAAACTTTATATTCCTTGAAGAGGTTCTA 21889007 >seq9 Length=37469608 Score = 170 bits (188), Expect = 2e-37 Identities = 382/568 (67%), Gaps = 8/568 (1%) Strand=Plus/Plus Query 181028 GTTCGGCGTACTGATGATTCCAACTCTGTTGGCAGCAACTATCTGT-TTCATCGTCGCCT 181086 ||| || || |||||||||| | | |||| | ||||| | ||| || || |||| | Sbjct 1917761 GTTTGGTGTTTTGATGATTCCTATTGTGTTAACCACAACTTT-TGTATTTATTATCGCTT 1917819 Query 181087 TCGTCGCTGCTCCCCCTGTGGACATCGACGGCATCCGTGAACCCGTCGCTGGTTCACTCA 181146 | ||| ||| || || ||||| | || || || | || || || ||| || || Sbjct 1917820 TTATCGTTGCCCCTCCAGTGGATAATGATGGTATTCACGAGCCTGTTTTTGGATCCCTAC 1917879 Query 181147 TGTATGGTAACAACATCATCTCTGGTGCAGTTGTTCCATCTTCCAACGCAATTGGTCTTC 181206 | ||||| ||||| ||||| |||||||| | ||| ||| || || | | | | Sbjct 1917880 TTTATGGAAACAATATCATTTCTGGTGCGACTATTCATACTTTTGCGGCTATAGATTTGC 1917939 Query 181207 ACTTCTATCCCATCTGGGAAGCCGCATCACTTGATGAGTGGCTGTATAACGGTGGTCCTT 181266 | || ||||| || ||||||| | | ||||||| || || || |||| ||||||| Sbjct 1917940 ATTTTTATCCTATATGGGAAGTGACTTTTGTTGATGAATGCCTATACAACGACGGTCCTT 1917999 Query 181267 TCCAACTCGTAGTCTTTCACTTCCTTATCGGCATTTA---TGCATACATGGGACGTGAAT 181323 |||| | || | || ||| | | | | || ||| |||||||| ||||||| Sbjct 1918000 ATGAACTAATTGTTCTACATTTCTTACTTAG--TGTAGCTTGC-TACATGGGTCGTGAAT 1918056 Query 181324 GGGAACTCTCTTACCGCTTAGGTATGCGCCCCTGGATCTGTGTTGCATACTCTGCTCCAG 181383 ||||||| | || || ||||||| | ||||| ||||||||| || |||| | Sbjct 1918057 GGGAACTTAACTTTCGTTTGGGTATGCATCATTGGATTGCTGTTGCATATTCAACTCCTG 1918116 Query 181384 TCGCAGCAGCATCTGCTGTATTCCTAGTCTATCCTTTCGGTCAAGGTTCTTTCTCTGACG 181443 ||||| | || ||| ||| | |||||||| | |||||||| || || || | Sbjct 1918117 ATGCAGCTGTTATTGTTGTTTTCTTGATCTATCCTATTGGTCAAGGAAGCTTTTCGGATG 1918176 Query 181444 CAATGCCACTTGGCATCTCTGGTACATTCAACTACATGCTTGTTTTCCAAGCAGAGCACA 181503 |||||| | || || | |||||| ||||| | ||| |||| || || ||||| | Sbjct 1918177 GAATGCCTTTAGGAATTTATGGTACTTTCAATTTTATGATTGTATTTCAGATTGAGCATA 1918236 Query 181504 ACATTCTGATGCATCCCTTCCACATGTTGGGTGTCGCAGGTGTATTTGGTGGTTCACTGT 181563 | ||||| ||||||| || ||| |||| |||| | ||||||||||| || || | Sbjct 1918237 ATATTCTTATGCATCAATTTCACGTGTTAAGTGTGACTGGTGTATTTGGCAACTCCCTAT 1918296 Query 181564 TCAGTGCAATGCACGGTTCTTTGGTTAC 181591 ||||||| || | | ||| || || || Sbjct 1918297 TCAGTGCTATAAATGATTCCTTAGTAAC 1918324 >seq2 Length=49040938 Score = 161 bits (178), Expect = 1e-34 Identities = 238/334 (71%), Gaps = 15/334 (4%) Strand=Plus/Plus Query 183042 GAGACCTATTCGATGGTTACAGCGAATCGTTTTTGGTCACAAATCTTCGGGGTTGCGTTT 183101 || || ||||| ||||| || ||||| |||||||| |||||||| |||||||| ||| Sbjct 27893026 GAAACTTATTCAATGGTAT--GCTAATCGCTTTTGGTCCCAAATCTTTGGGGTTGCTTTT 27893083 Query 183102 AGCAATAAGCGTTGGTTGCACTTCTTTATGTTGTTTGTTCCTGTCATGGGTCTTTGGGTC 183161 |||| | || ||||||||||| ||||| || || || ||| | ||| | Sbjct 27893084 TCCAATTA----------CATTTCTTTATGTTATTTGTACCAGTAATTGGTTTATGGATG 27893133 Query 183162 TCTTCTATTGGGATCATTGGGCTTGCTCTTAATCTT-CGTGCTTATGATTTTGTGAGTCA 183220 | || || |||| | | || | | ||| | ||| |||||||||||||| || ||| Sbjct 27893134 AGTGCTCTTAGGAT-AGTCGGTTAGGCCTTGACCTTACGTGCTTATGATTTCGTTTCTCA 27893192 Query 183221 AGAGATTA-GAGCAGCAGAAGATCCTGAGTTCGAGACGTTCTACACAAAGAACATCCTTC 183279 ||| ||| | ||||| ||||||||||| || || | || ||||| || || || || Sbjct 27893193 AGAAATTTTGCGCAGCGGAAGATCCTGAATTTGATATTTTATACACCAAAAATATTCTCT 27893252 Query 183280 TCAATGAAGGACTACGTGCTTGGTTGGCACCTGCCGATCAACCACATGAAAACTTCATCT 183339 | || ||||| | |||| ||| | ||| || ||||| | ||||||||| | || | Sbjct 27893253 TAAACGAAGGTATTCGTGTGTGGATTGCAGCTCAAGATCAGCTTCATGAAAACCTTATAT 27893312 Query 183340 TCCCTGAAGAAGTTCTACCTAGAGGTAACGCACT 183373 ||||||| || |||||||| | |||||||| || Sbjct 27893313 TCCCTGAGGAGGTTCTACCACGTGGTAACGCTCT 27893346 >seq1 Length=52205531 Score = 150 bits (166), Expect = 2e-31 Identities = 160/211 (76%), Gaps = 0/211 (0%) Strand=Plus/Plus Query 183067 ATCGTTTTTGGTCACAAATCTTCGGGGTTGCGTTTAGCAATAAGCGTTGGTTGCACTTCT 183126 |||| |||||||| |||||||| |||||||| ||| |||||| |||||||| || |||| Sbjct 38350079 ATCGCTTTTGGTCCCAAATCTTTGGGGTTGCTTTTTCCAATAAACGTTGGTTACATTTCT 38350138 Query 183127 TTATGTTGTTTGTTCCTGTCATGGGTCTTTGGGTCTCTTCTATTGGGATCATTGGGCTTG 183186 ||||||| ||||| || || | ||| | ||| | | || ||||| | | || | | Sbjct 38350139 TTATGTTATTTGTACCAGTAACTGGTTTATGGATGAGTGCTCTTGGGGTAGTCGGTTTGG 38350198 Query 183187 CTCTTAATCTTCGTGCTTATGATTTTGTGAGTCAAGAGATTAGAGCAGCAGAAGATCCTG 183246 | || || | |||||||||||||| || |||||| || | ||||| |||||||||| Sbjct 38350199 CCCTGAACTTACGTGCTTATGATTTCGTTTCTCAAGAAATCCGCGCAGCGGAAGATCCTG 38350258 Query 183247 AGTTCGAGACGTTCTACACAAAGAACATCCT 183277 | || ||||| |||||||| || || || || Sbjct 38350259 AATTTGAGACTTTCTACACCAAAAATATTCT 38350289 >seq8 Length=59662532 Score = 120 bits (132), Expect = 4e-22 Identities = 182/258 (71%), Gaps = 11/258 (4%) Strand=Plus/Minus Query 183051 TCGATGGTTACAGCGAATCGTTTTTGGTCACAAATCTTCGGGGTTGCGTTTAGCAATAAG 183110 || |||||||| || ||||| |||||||| |||||||| |||||||| ||| Sbjct 1232871 TCAATGGTTACTGCTAATCGCTTTTGGTCCCAAATCTTTGGGGTTGCTTTT--------- 1232821 Query 183111 CGTTGGTTGCACTTCTTTATGTTGTTTGTTCCTGTCATGGGTCTTTGGGTCTCTTCTATT 183170 | |||||| || ||||||||||| ||||| || || | ||| | || | | || || Sbjct 1232820 CATTGGTTACATTTCTTTATGTTATTTGTACCAGTAACTGGTTTATGAATGAGTGCTCTT 1232761 Query 183171 GGGATCATTGGGCTTGCTCTTAATCTTCGTGCTTATGATTTTGTGAGTCAAGAGATTAGA 183230 ||| | | || | || | || | ||||||||||||| || |||||| || | Sbjct 1232760 GGGGTGGTCGGTTTGGCCGTGAACTTATGTGCTTATGATTTCGTTTCTCAAGAAATCCGC 1232701 Query 183231 GCAGCAGAAGATCCTGAGTTCGAGACGTTCTACACAAAGAACATCCTTCTCAATGAAGGA 183290 ||||| ||| ||||||| || ||||| ||| ||| || || || | ||| || |||| Sbjct 1232700 GCAGCGGAATATCCTGAATTTGAGACTTTCAACAACAAAAATATTC-TCTTAA-AAAGGT 1232643 Query 183291 CTACGTGCTTGGTTGGCA 183308 | ||||| ||| ||||| Sbjct 1232642 ATTCGTGCGTGGATGGCA 1232625 >seq4 Length=45960019 Score = 102 bits (112), Expect = 1e-16 Identities = 139/190 (73%), Gaps = 3/190 (2%) Strand=Plus/Plus Query 183186 GCTCTTAATCTT-CGTGCTTATGATTTTGTGAGTCAAGAGATTAGAGCAGCAGAAGATCC 183244 |||| | | ||| |||||||||||||| || |||||| || | ||| | ||||| | Sbjct 43482219 GCTCCTGAACTTACGTGCTTATGATTTCGTTTCTCAAGAAATCCGTGCATGA-AAGATTC 43482277 Query 183245 TGAGTTCGAGACGTTCTACAC-AAAGAACATCCTTCTCAATGAAGGACTACGTGCTTGGT 183303 ||| || || || || ||||| ||| || || || | || ||||| | ||||| ||| Sbjct 43482278 TGAATTTGATACTTTGTACACAAAAAAATATTCTCTTAAACGAAGGTATTCGTGCGTGGA 43482337 Query 183304 TGGCACCTGCCGATCAACCACATGAAAACTTCATCTTCCCTGAAGAAGTTCTACCTAGAG 183363 ||||| | ||||| || ||||||||| | || |||||||| || |||||||| | | Sbjct 43482338 TGGCAATTCAAGATCAGCCTCATGAAAACCTTATATTCCCTGAGGAGGTTCTACCACGTG 43482397 Query 183364 GTAACGCACT 183373 | ||||| || Sbjct 43482398 GAAACGCTCT 43482407 >seq11 Length=50367376 Score = 100 bits (110), Expect = 3e-16 Identities = 79/95 (83%), Gaps = 0/95 (0%) Strand=Plus/Plus Query 183048 TATTCGATGGTTACAGCGAATCGTTTTTGGTCACAAATCTTCGGGGTTGCGTTTAGCAAT 183107 ||||| |||||||| | ||||| |||||||| |||||||| |||||||| ||| |||| Sbjct 3718489 TATTCAATGGTTACTCCTAATCGCTTTTGGTCCCAAATCTTTGGGGTTGCTTTTTCCAAT 3718548 Query 183108 AAGCGTTGGTTGCACTTCTTTATGTTGTTTGTTCC 183142 || | |||||| || ||||||||||| ||||| || Sbjct 3718549 AAACATTGGTTACATTTCTTTATGTTATTTGTACC 3718583 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 614612160634240