Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phaseolus_20vulgaris_20[refseq_20GCF_5F000499845.1_202013-11-29] 708 sequences; 521,076,696 total letters Query= NC_026928.1 Length=189418 Score E Sequences producing significant alignments: (Bits) Value seq6 156 5e-33 seq1 134 2e-26 >seq6 Length=31977256 Score = 156 bits (172), Expect = 5e-33 Identities = 467/714 (65%), Gaps = 19/714 (3%) Strand=Plus/Plus Query 179511 TGGAATTTCGTGGCTCTCCACGGTGCCTTCGCTCTCATTGGTTTCATGCTTAGGCAATTT 179570 |||| ||| || | |||||| ||||| || | | || ||| |||| | |||| | Sbjct 21888305 TGGACTTTTGTTGTTCTCCATGGTGCTTTTGGATTAATACGTTCCATGTTACATCAATCT 21888364 Query 179571 GAACTTGCTCGCCTGATTGGTATCAGACCTTACAAT---GCGATTGCTTTTTCTGGTCCT 179627 |||||||||| | || | |||||| ||| | ||||| || || ||||| Sbjct 21888365 GAACTTGCTCAATTTTTTCAATTACAACCTTATAATAATGTAATTGCATTCTCAGGTCCA 21888424 Query 179628 ATTGCTGTATTCGTCAGTGTTTTCCTCATCTATCCTTTGGGACAGTCCTCTTGGTTTTTC 179687 |||| | | || || ||| ||||| || ||||| |||| |||| ||| || || Sbjct 21888425 ATTGTTATTTTTGTTTATGTATTCCTTATTTATCCACTGGGTCAGTTTGGTTGATTCTTT 21888484 Query 179688 GCGCCGTCCTTTGGTGTCGCGGCGA-TCTTCAGGTTCTTGCTGTTCCTTCAGGGTTTCCA 179746 || || ||| || || || | | |||| | | | | || | || | || || Sbjct 21888485 GCTCCTAGTTTTAATGGAGCAGCTAATTTTCAAAT-CATCATATTTTTCCAAAGATTTCA 21888543 Query 179747 CAACTGGACGCTCAACCCCTTCCATATGATGGGAGTTGCTGGTATACTAGGAGGAGCACT 179806 | ||||| | ||||| || |||||| ||||||||| | || | || | ||||| Sbjct 21888544 TACTTGGACATTAAACCCATTTCATATGCTGGGAGTTGTCATTGTATTGGGTGTTGCACT 21888603 Query 179807 GCTCAGTGCTATCCATGGAGTTACTGTAGAGAATACATTGTATGAAGATGGAGAACAAGC 179866 || | ||||| ||||| | || ||||| | ||| || | ||||||||| || | Sbjct 21888604 ACTATGCGCTATTCATGGTGCAACGGTAGAAAGTACTTTATTTGAAGATGGTGATGGTGA 21888663 Query 179867 AAATACCTTTAAGGCGTTTGATTCGACACAGGAAGAAGAGA-CTTATTCTATGGTCACTG 179925 |||||| ||| || ||| | | || || ||| | | | ||||| ||| | |||| Sbjct 21888664 AAATACATTTTGTGCTTTTAACCCAACCCAACCCGAAAAAAACCTATTCAATGATTACTG 21888723 Query 179926 CAAACCGCTTCTGGTCGCAGATCTTCGGTATTGCATTT-TCTAACAAGCGGTGGCTTCAT 179984 || ||||| ||||| || ||||| || ||| ||| ||||| |||| ||| | ||| Sbjct 21888724 TTAATCGCTTTTGGTCCCAAATCTTTGGGGTTGTTTTTCTCTAATAAGCATTGGTTACAT 21888783 Query 179985 TTTTTCATGTTGTTTGTGCCTGTTATGGGTCTATGGACATCCTCTATTGGCATTATTGG- 180043 || || ||||||||||| || || | || |||| | | |||| || |||| Sbjct 21888784 TTATTTATGTTGTTTGTACCAGTAACTCGTTTATGAATGAGTGTTCTTGGGATAGTTGGT 21888843 Query 180044 TCTTGCTCTCAACCTTCGTGCTTACGATTTCGTAAGTCAGGAGATCAGAGCAGCAGAAGA 180103 || | || | ||||| |||||||| |||||||| ||| || ||| | ||| ||| Sbjct 21888844 TCGTCCT-TGAACCTACGTGCTTATGATTTCGTTTCTCAAGAAATCTGTGCAATAGA--- 21888899 Query 180104 TCCCGAGTTTGAGACCTTCTACACCAAGAACATTCTTCTCAATGAAGGACTACGTGCATG 180163 ||| |||| || ||||| || || ||| | | || ||||| | |||||||| Sbjct 21888900 -------TTTAAGACTTTATACACTAAAAATATTTTCTTAAACGAAGGTATTCGTGCATG 21888952 Query 180164 GTTGGCACCAGTTGATCAACCACATGAGTCATTCGTATTCCCAGAAGAAGTTCT 180217 | || || | |||| | ||||| || |||||| ||||| ||||| Sbjct 21888953 GATGACAACTCAAAATCAGTCTCATGAAAACTTTATATTCCTTGAAGAGGTTCT 21889006 Score = 86.0 bits (94), Expect = 8e-12 Identities = 136/195 (70%), Gaps = 0/195 (0%) Strand=Plus/Plus Query 176337 GATGATCAGTATATCCTTGACGCTGCTGAAGAAGCAGGTGTAGATATCAATTACTCTTGT 176396 |||||| || || ||||| ||||| || |||| ||| | || | |||||| || Sbjct 31665047 GATGATGCATACATTCTTGATGCTGCAGAGGAAGAAGGCATTGACCTTCCTTACTCATGC 31665106 Query 176397 CGTGCTGGTGCTTGTTCATCTTGTGCTGGCAAACTAGAGAGTGGTTCTGTTGATCAGAGT 176456 | |||||| |||| || || |||||||||||| | | | |||| || || ||| | Sbjct 31665107 AGGGCTGGTTCTTGCTCTTCATGTGCTGGCAAAGTTGTGGGTGGCCAAGTGGACCAGTCT 31665166 Query 176457 GATCAGTCTTTCCTGGATGATGATCAAATTGAATCTGGTTTTATTCTGACTTGCGTATCT 176516 ||| ||||| ||||| || |||||||| || ||| |||| || ||||| || Sbjct 31665167 GATGGTAACTTCCTTGATGACGACCAAATTGAGCAAGGCTTTGTTCTCACCTGCGTTGCT 31665226 Query 176517 TATCCTACTAGTGAT 176531 ||||| ||| |||| Sbjct 31665227 TATCCCACTTCTGAT 31665241 Score = 86.0 bits (94), Expect = 8e-12 Identities = 136/195 (70%), Gaps = 0/195 (0%) Strand=Plus/Plus Query 176337 GATGATCAGTATATCCTTGACGCTGCTGAAGAAGCAGGTGTAGATATCAATTACTCTTGT 176396 |||||| || || ||||| ||||| || |||| ||| | || | |||||| || Sbjct 31674083 GATGATGCATACATTCTTGATGCTGCAGAGGAAGAAGGCATTGACCTTCCTTACTCATGC 31674142 Query 176397 CGTGCTGGTGCTTGTTCATCTTGTGCTGGCAAACTAGAGAGTGGTTCTGTTGATCAGAGT 176456 | |||||| |||| || || |||||||||||| | | | |||| || || ||| | Sbjct 31674143 AGGGCTGGTTCTTGCTCTTCATGTGCTGGCAAAGTTGTGGGTGGCCAAGTGGACCAGTCT 31674202 Query 176457 GATCAGTCTTTCCTGGATGATGATCAAATTGAATCTGGTTTTATTCTGACTTGCGTATCT 176516 ||| ||||| ||||| || ||||||||| || ||| |||| || || || || Sbjct 31674203 GATGGTAACTTCCTTGATGACGACCAAATTGAACAAGGCTTTGTTCTCACCTGTGTTGCT 31674262 Query 176517 TATCCTACTAGTGAT 176531 ||||| ||| |||| Sbjct 31674263 TATCCCACTTCTGAT 31674277 >seq1 Length=52205531 Score = 134 bits (148), Expect = 2e-26 Identities = 155/209 (74%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 179931 CGCTTCTGGTCGCAGATCTTCGGTATTGCATTTTCTAACAAGCGGTGGCTTCATTTTTTC 179990 ||||| ||||| || ||||| || |||| ||||| || || || ||| | ||||| || Sbjct 38350081 CGCTTTTGGTCCCAAATCTTTGGGGTTGCTTTTTCCAATAAACGTTGGTTACATTTCTTT 38350140 Query 179991 ATGTTGTTTGTGCCTGTTATGGGTCTATGGACATCCTCTATTGGCATTATTGGTCTTGCT 180050 ||||| ||||| || || | ||| |||||| || |||| | | ||| | || Sbjct 38350141 ATGTTATTTGTACCAGTAACTGGTTTATGGATGAGTGCTCTTGGGGTAGTCGGTTTGGCC 38350200 Query 180051 CTCAACCTTCGTGCTTACGATTTCGTAAGTCAGGAGATCAGAGCAGCAGAAGATCCCGAG 180110 || ||| | |||||||| |||||||| ||| || ||| | ||||| |||||||| || Sbjct 38350201 CTGAACTTACGTGCTTATGATTTCGTTTCTCAAGAAATCCGCGCAGCGGAAGATCCTGAA 38350260 Query 180111 TTTGAGACCTTCTACACCAAGAACATTCT 180139 |||||||| ||||||||||| || ||||| Sbjct 38350261 TTTGAGACTTTCTACACCAAAAATATTCT 38350289 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 606004236815040