Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phaseolus_20vulgaris_20[refseq_20GCF_5F000499845.1_202013-11-29] 708 sequences; 521,076,696 total letters Query= NC_027130.1 Length=172688 Score E Sequences producing significant alignments: (Bits) Value seq6 187 3e-42 seq9 138 1e-27 seq7 136 4e-27 seq1 120 3e-22 seq8 102 9e-17 >seq6 Length=31977256 Score = 187 bits (206), Expect = 3e-42 Identities = 492/741 (66%), Gaps = 25/741 (3%) Strand=Plus/Plus Query 160187 TGGAATTTTGTGGCACTCCATGGTGCCTTCGCCCTAATTGGATTCATGCTCCGTCAGTTT 160246 |||| |||||| | ||||||||||| || | |||| | | |||| | | ||| | | Sbjct 21888305 TGGACTTTTGTTGTTCTCCATGGTGCTTTTGGATTAATACGTTCCATGTTACATCAATCT 21888364 Query 160247 GAACTGGCACG-TCTCATCGGTATCCGTCCTTACAATGCT---ATTGCGTTCTCTGGTCC 160302 ||||| || | | | || | | | ||||| ||| | ||||| ||||| ||||| Sbjct 21888365 GAACTTGCTCAATTTTTTCAAT-TACAACCTTATAATAATGTAATTGCATTCTCAGGTCC 21888423 Query 160303 TATTGCTGTCTTTGTCAGCGTATTCCTCATCTACCCATTGGGTCAGTCCAGTTGGTTTTT 160362 |||| | | ||||| |||||||| || || ||| ||||||||| |||| || || Sbjct 21888424 AATTGTTATTTTTGTTTATGTATTCCTTATTTATCCACTGGGTCAGTTTGGTTGATTCTT 21888483 Query 160363 CGCTCCGTCCTTTGGGGTGGCAGC-AATCTTTAGAT--TCCTGTTGTTCCTTCAAGGATT 160419 ||||| ||| | ||||| ||| || | || || | || |||| || |||| Sbjct 21888484 TGCTCCTAGTTTTAATGGAGCAGCTAATTTTCAAATCATCATATTTTTCC---AAAGATT 21888540 Query 160420 TCACAACTGGACGCTTAACCCCTTCCATATGATGGGAGTTGCTGGTATACTAGGAGGAGC 160479 ||| | ||||| | ||||| || |||||| ||||||||| | || | || | || Sbjct 21888541 TCATACTTGGACATTAAACCCATTTCATATGCTGGGAGTTGTCATTGTATTGGGTGTTGC 21888600 Query 160480 ACTGCTCAGTGCCATCCATGGCGTTACTGTAGAGAACACACTGTATGAAGATGGAGAACA 160539 ||| || | || || ||||| | || ||||| | || | | ||||||||| || Sbjct 21888601 ACTACTATGCGCTATTCATGGTGCAACGGTAGAAAGTACTTTATTTGAAGATGGTGATGG 21888660 Query 160540 AGCAAATACCTTTAAGGCGTTTGATTCGACACAGGAAGAAGAGA-CTTATTCTATGGTCA 160598 | |||||| ||| || ||| | | || || ||| | | | ||||| ||| | | Sbjct 21888661 TGAAAATACATTTTGTGCTTTTAACCCAACCCAACCCGAAAAAAACCTATTCAATGATTA 21888720 Query 160599 CTGCAAACCGCTTCTGGTCGCAGATCTTCGGTATTGCGTTT-TCTAACAAGCGGTGGCTT 160657 ||| || ||||| ||||| || ||||| || ||| ||| ||||| |||| ||| | Sbjct 21888721 CTGTTAATCGCTTTTGGTCCCAAATCTTTGGGGTTGTTTTTCTCTAATAAGCATTGGTTA 21888780 Query 160658 CATTTTTTCATGTTGTTTGTGCCTGTTATGGGTCTTTGGACATCCAGTATTGGCATTATT 160717 ||||| || ||||||||||| || || | || | || | | |||| || || Sbjct 21888781 CATTTATTTATGTTGTTTGTACCAGTAACTCGTTTATGAATGAGTGTTCTTGGGATAGTT 21888840 Query 160718 GG-TCTTGCTCTCAATCTTCGTGCTTACGATTTCGTGAGTCAAGAGATTAGAGCAGCAGA 160776 || || | || | || || |||||||| |||||||| |||||| || | ||| || Sbjct 21888841 GGTTCGTCCT-TGAACCTACGTGCTTATGATTTCGTTTCTCAAGAAATCTGTGCAATAG- 21888898 Query 160777 AGATCCAGAATTTGAGACCTTCTACACCAAGAACATCCTACTGAATGAAGGACTACGTGC 160836 |||| |||| || ||||| || || || | | || ||||| | ||||| Sbjct 21888899 ---------ATTTAAGACTTTATACACTAAAAATATTTTCTTAAACGAAGGTATTCGTGC 21888949 Query 160837 ATGGTTAGCACCTGCCGACCAACCCCATGAGAACTTTATCTTCCCAGAAGAAGTTCTTCC 160896 |||| | || || | || | ||||| |||||||| |||| ||||| ||||| | Sbjct 21888950 ATGGATGACAACTCAAAATCAGTCTCATGAAAACTTTATATTCCTTGAAGAGGTTCTATC 21889009 Query 160897 TAGAGGCAACGCCCTTTAATA 160917 | | ||| | |||||||| Sbjct 21889010 ACGTGAAAACACTCTTTAATA 21889030 >seq9 Length=37469608 Score = 138 bits (152), Expect = 1e-27 Identities = 366/550 (67%), Gaps = 8/550 (1%) Strand=Plus/Plus Query 158426 GTTCGGCGTACTGATGATTCCAACTCTGTTGGCAGCAACCATCTGT-TTCATCGTCGCCT 158484 ||| || || |||||||||| | | |||| | |||| | ||| || || |||| | Sbjct 1917761 GTTTGGTGTTTTGATGATTCCTATTGTGTTAACCACAACTTT-TGTATTTATTATCGCTT 1917819 Query 158485 TCGTCGCTGCTCCCCCTGTGGACATCGACGGCATCCGTGAACCCGTCGCTGGTTCACTCA 158544 | ||| ||| || || ||||| | || || || | || || || ||| || || Sbjct 1917820 TTATCGTTGCCCCTCCAGTGGATAATGATGGTATTCACGAGCCTGTTTTTGGATCCCTAC 1917879 Query 158545 TGTATGGTAACAACATCATCTCTGGTGCAGTTGTACCATCTTCCAACGCAATTGGTCTTC 158604 | ||||| ||||| ||||| |||||||| | | | ||| || || | | | | Sbjct 1917880 TTTATGGAAACAATATCATTTCTGGTGCGACTATTCATACTTTTGCGGCTATAGATTTGC 1917939 Query 158605 ACTTCTATCCCATCTGGGAAGCCGCATCACTTGATGAGTGGCTGTATAACGGTGGTCCTT 158664 | || ||||| || ||||||| | | ||||||| || || || |||| ||||||| Sbjct 1917940 ATTTTTATCCTATATGGGAAGTGACTTTTGTTGATGAATGCCTATACAACGACGGTCCTT 1917999 Query 158665 TCCAACTCGTAGTCTTTCACTTCCTTA--TCG-GCATCTATGCATATATGGGACGTGAAT 158721 |||| | || | || ||| ||| | | | | || ||| || ||||| ||||||| Sbjct 1918000 ATGAACTAATTGTTCTACATTTC-TTACTTAGTGTAGCT-TGC-TACATGGGTCGTGAAT 1918056 Query 158722 GGGAACTTTCATACCGCTTAGGTATGCGCCCCTGGATCTGTGTAGCATATTCTGCACCAG 158781 |||||||| | || || ||||||| | ||||| ||| |||||||| | || | Sbjct 1918057 GGGAACTTAACTTTCGTTTGGGTATGCATCATTGGATTGCTGTTGCATATTCAACTCCTG 1918116 Query 158782 TCGCTGCAGCATCTGCTGTATTCCTCGTCTATCCTTTCGGTCAAGGTTCTTTCTCCGATG 158841 || || | || ||| ||| | |||||||| | |||||||| || || |||| Sbjct 1918117 ATGCAGCTGTTATTGTTGTTTTCTTGATCTATCCTATTGGTCAAGGAAGCTTTTCGGATG 1918176 Query 158842 CTATGCCTCTTGGTATCTCTGGTACTTTTAACTACATGCTTGTATTCCAAGCAGAACACA 158901 |||||| | || || | ||||||||| || | ||| ||||||| || || || | Sbjct 1918177 GAATGCCTTTAGGAATTTATGGTACTTTCAATTTTATGATTGTATTTCAGATTGAGCATA 1918236 Query 158902 ACATCCTTATGCACCCGTTCCATATGCTCGGTGTTGCTGGGGTATTCGGTGGATCTCTTT 158961 | || |||||||| | || || || | |||| |||| ||||| || || || | Sbjct 1918237 ATATTCTTATGCATCAATTTCACGTGTTAAGTGTGACTGGTGTATTTGGCAACTCCCTAT 1918296 Query 158962 TCTCTGCTAT 158971 || |||||| Sbjct 1918297 TCAGTGCTAT 1918306 >seq7 Length=51758522 Score = 136 bits (150), Expect = 4e-27 Identities = 159/215 (74%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 158706 TATATGGGACGTGAATGGGAACTTTCATACCGCTTAGGTATGCGCCCCTGGATCTGTGTA 158765 || ||||| |||||||| |||||| | || | |||||||| || ||||| ||| Sbjct 47750129 TACATGGGTCGTGAATGAGAACTTAGTTTTCGTCTGGGTATGCGTCCTTGGATTGCTGTT 47750188 Query 158766 GCATATTCTGCACCAGTCGCTGCAGCATCTGCTGTATTCCTCGTCTATCCTTTCGGTCAA 158825 |||||||| || || || || || || ||||||| ||| | |||||||| | |||||| Sbjct 47750189 GCATATTCAGCTCCTGTTGCAGCCGCTACTGCTGTTTTCTTGATCTATCCTATTGGTCAA 47750248 Query 158826 GGTTCTTTCTCCGATGCTATGCCTCTTGGTATCTCTGGTACTTTTAACTACATGCTTGTA 158885 || || || |||| ||||||| | || || ||||||||||| || | ||| ||||| Sbjct 47750249 GGAAGCTTTTCGGATGGTATGCCTTTAGGAATTTCTGGTACTTTCAATTTTATGATTGTA 47750308 Query 158886 TTCCAAGCAGAACACAACATCCTTATGCACCCGTT 158920 || || || || || || || |||||||| || || Sbjct 47750309 TTTCAGGCTGAGCATAATATTCTTATGCATCCATT 47750343 >seq1 Length=52205531 Score = 120 bits (132), Expect = 3e-22 Identities = 152/209 (73%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 160607 CGCTTCTGGTCGCAGATCTTCGGTATTGCGTTTTCTAACAAGCGGTGGCTTCATTTTTTC 160666 ||||| ||||| || ||||| || |||| ||||| || || || ||| | ||||| || Sbjct 38350081 CGCTTTTGGTCCCAAATCTTTGGGGTTGCTTTTTCCAATAAACGTTGGTTACATTTCTTT 38350140 Query 160667 ATGTTGTTTGTGCCTGTTATGGGTCTTTGGACATCCAGTATTGGCATTATTGGTCTTGCT 160726 ||||| ||||| || || | ||| | |||| | |||| | | ||| | || Sbjct 38350141 ATGTTATTTGTACCAGTAACTGGTTTATGGATGAGTGCTCTTGGGGTAGTCGGTTTGGCC 38350200 Query 160727 CTCAATCTTCGTGCTTACGATTTCGTGAGTCAAGAGATTAGAGCAGCAGAAGATCCAGAA 160786 || || | |||||||| |||||||| |||||| || | ||||| |||||||| ||| Sbjct 38350201 CTGAACTTACGTGCTTATGATTTCGTTTCTCAAGAAATCCGCGCAGCGGAAGATCCTGAA 38350260 Query 160787 TTTGAGACCTTCTACACCAAGAACATCCT 160815 |||||||| ||||||||||| || || || Sbjct 38350261 TTTGAGACTTTCTACACCAAAAATATTCT 38350289 >seq8 Length=59662532 Score = 102 bits (112), Expect = 9e-17 Identities = 106/139 (76%), Gaps = 0/139 (0%) Strand=Plus/Plus Query 159226 GTTTCAACTTCAACCAGTCCATCCTTGATGGTCAGGGTCGTGTGTTGAACACCTGGGCAG 159285 |||| || |||||||| ||| | ||||| |||| |||||||| | || |||||||| | Sbjct 31293220 GTTTTAATTTCAACCAATCCGTAGTTGATAGTCAAGGTCGTGTAATAAATACCTGGGCTG 31293279 Query 159286 ATGTACTGAACCGTGCAGGTCTGGGTATGGAAGTTATGCATGAGCGTAACGCACACAACT 159345 || | | ||||| || || ||||||||||| |||||||| ||||| || || || | Sbjct 31293280 ATATTATTAACCGAGCTAACCTTGGTATGGAAGTCATGCATGAACGTAATGCTCATAATT 31293339 Query 159346 TCCCACTCGACCTTGCTGC 159364 |||| || || || ||||| Sbjct 31293340 TCCCTCTAGATCTAGCTGC 31293358 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 552468710608640