Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phaseolus_20vulgaris_20[refseq_20GCF_5F000499845.1_202013-11-29] 708 sequences; 521,076,696 total letters Query= NC_027132.1 Length=190768 Score E Sequences producing significant alignments: (Bits) Value seq6 217 2e-51 seq2 149 8e-31 seq7 147 3e-30 seq9 143 3e-29 seq1 134 2e-26 seq8 84.2 3e-11 >seq6 Length=31977256 Score = 217 bits (240), Expect = 2e-51 Identities = 481/717 (67%), Gaps = 17/717 (2%) Strand=Plus/Plus Query 180309 TGGAATTTCGTGGCTCTCCACGGTGCCTTCGCCCTAATTGGATTTATGCTACGCCAGTTT 180368 |||| ||| || | |||||| ||||| || | |||| | | ||| ||| || | | Sbjct 21888305 TGGACTTTTGTTGTTCTCCATGGTGCTTTTGGATTAATACGTTCCATGTTACATCAATCT 21888364 Query 180369 GAACTGGCACGTCTTATTGGTATCCGTCCTTACAATGCT---ATTGCATTCTCTGGTCCT 180425 ||||| || | || || | | ||||| ||| | ||||||||||| ||||| Sbjct 21888365 GAACTTGCTCAATTTTTTCAATTACAACCTTATAATAATGTAATTGCATTCTCAGGTCCA 21888424 Query 180426 ATCGCTGTATTTGTCAGCGTATTTCTCATCTACCCACTGGGTCAGTCCAGTTGGTTCTTT 180485 || | | | ||||| ||||| || || || ||||||||||||| |||| |||||| Sbjct 21888425 ATTGTTATTTTTGTTTATGTATTCCTTATTTATCCACTGGGTCAGTTTGGTTGATTCTTT 21888484 Query 180486 GCTCCCTCTTTTGGGGTAGCAGCAATCTTTAGATTCCTACTCTTTCTTCAGGGTTTCCAC 180545 ||||| |||| | |||||| | ||| | || | | ||| | || | || || Sbjct 21888485 GCTCCTAGTTTTAATGGAGCAGCTAATTTTCAAATCATCATATTTTTCCAAAGATTTCAT 21888544 Query 180546 AACTGGACCCTCAACCCCTTCCATATGATGGGAGTTGCTGGTATACTAGGTGGAGCATTG 180605 | ||||| | ||||| || |||||| ||||||||| | || | |||| ||| | Sbjct 21888545 ACTTGGACATTAAACCCATTTCATATGCTGGGAGTTGTCATTGTATTGGGTGTTGCACTA 21888604 Query 180606 CTATCAGCAATCCATGGCGTAACTGTGGAGAACACACTGTATGAAGATGGAGAACAAGCA 180665 |||| || || ||||| | ||| || || | || | | ||||||||| || | | Sbjct 21888605 CTATGCGCTATTCATGGTGCAACGGTAGAAAGTACTTTATTTGAAGATGGTGATGGTGAA 21888664 Query 180666 AACACCTTTAAGGCATTTGATTCAACGCAA-GAGGAGGAAACTTACTCTATGGTCACTGC 180724 || || ||| || ||| | |||| ||| | | |||| || || ||| | |||| Sbjct 21888665 AATACATTTTGTGCTTTTAACCCAACCCAACCCGAAAAAAACCTATTCAATGATTACTGT 21888724 Query 180725 AAACCGCTTCTGGTCGCAGATCTTCGGTATTGCATTT-TCTAACAAGCGGTGGCTTCATT 180783 || ||||| ||||| || ||||| || ||| ||| ||||| |||| ||| | |||| Sbjct 21888725 TAATCGCTTTTGGTCCCAAATCTTTGGGGTTGTTTTTCTCTAATAAGCATTGGTTACATT 21888784 Query 180784 TTTTCATGTTGTTTGTGCCTGTTATGGGTCTATGGACATCCTCTATTGGCATTATTGG-T 180842 | || ||||||||||| || || | || |||| | | |||| || |||| | Sbjct 21888785 TATTTATGTTGTTTGTACCAGTAACTCGTTTATGAATGAGTGTTCTTGGGATAGTTGGTT 21888844 Query 180843 CTTGCTCTCAACCTTCGTGCTTACGATTTCGTGAGTCAAGAGATCAGAGCAGCAGAAGAT 180902 | | || | ||||| |||||||| |||||||| |||||| ||| | ||| ||| Sbjct 21888845 CGTCCT-TGAACCTACGTGCTTATGATTTCGTTTCTCAAGAAATCTGTGCAATAGA---- 21888899 Query 180903 CCTGAGTTCGAGACGTTCTACACCAAGAACATCCTATTGAATGAAGGACTACGTGCATGG 180962 || |||| || ||||| || || || | || || ||||| | ||||||||| Sbjct 21888900 ------TTTAAGACTTTATACACTAAAAATATTTTCTTAAACGAAGGTATTCGTGCATGG 21888953 Query 180963 TTGGCACCTGCCGATCAACCACACGAAAACTTCATCTTCCCTGAAGAAGTTCTACCA 181019 || || || |||| | || |||||||| || |||| |||||| |||||| || Sbjct 21888954 ATGACAACTCAAAATCAGTCTCATGAAAACTTTATATTCCTTGAAGAGGTTCTATCA 21889010 >seq2 Length=49040938 Score = 149 bits (164), Expect = 8e-31 Identities = 242/345 (70%), Gaps = 15/345 (4%) Strand=Plus/Plus Query 180688 CAACGCAAGAGGAGGAAACTTACTCTATGGTCACTGCAAACCGCTTCTGGTCGCAGATCT 180747 |||| |||| | |||||||| || ||||| ||| || ||||| ||||| || |||| Sbjct 27893012 CAACCCAAGCTTAAGAAACTTATTCAATGGTA--TGCTAATCGCTTTTGGTCCCAAATCT 27893069 Query 180748 TCGGTATTGCATTTTCTAACAAGCGGTGGCTTCATTTTTTCATGTTGTTTGTGCCTGTTA 180807 | || |||| ||||| || | ||||| || ||||| ||||| || || | Sbjct 27893070 TTGGGGTTGCTTTTTCCAATTA----------CATTTCTTTATGTTATTTGTACCAGTAA 27893119 Query 180808 TGGGTCTATGGACATCCTCTATTGGCATTATTGGTCTTGCTCTCAACCTT-CGTGCTTAC 180866 | ||| |||||| || || | || | ||| || || ||||| |||||||| Sbjct 27893120 TTGGTTTATGGATGAGTGCTCTTAGGATAGTCGGTTAGGC-CTTGACCTTACGTGCTTAT 27893178 Query 180867 GATTTCGTGAGTCAAGAGATCA-GAGCAGCAGAAGATCCTGAGTTCGAGACGTTCTACAC 180925 |||||||| |||||| || | ||||| ||||||||||| || || | || ||||| Sbjct 27893179 GATTTCGTTTCTCAAGAAATTTTGCGCAGCGGAAGATCCTGAATTTGATATTTTATACAC 27893238 Query 180926 CAAGAACATCCTATTGAATGAAGGACTACGTGCATGGTTGGCACCTGCCGATCAACCACA 180985 ||| || || || || || ||||| | |||| ||| | ||| || ||||| | || Sbjct 27893239 CAAAAATATTCTCTTAAACGAAGGTATTCGTGTGTGGATTGCAGCTCAAGATCAGCTTCA 27893298 Query 180986 CGAAAACTTCATCTTCCCTGAAGAAGTTCTACCAAGAGGTAACGC 181030 |||||| | || |||||||| || ||||||||| | |||||||| Sbjct 27893299 TGAAAACCTTATATTCCCTGAGGAGGTTCTACCACGTGGTAACGC 27893343 >seq7 Length=51758522 Score = 147 bits (162), Expect = 3e-30 Identities = 162/216 (75%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 179187 CTATATGGGACGTGAGTGGGAACTTTCTTACCGTCTAGGTATGCGTCCATGGATCTGTGT 179246 ||| ||||| ||||| || |||||| || ||||| ||||||||||| ||||| ||| Sbjct 47750128 CTACATGGGTCGTGAATGAGAACTTAGTTTTCGTCTGGGTATGCGTCCTTGGATTGCTGT 47750187 Query 179247 TGCATACTCTGCACCAGTCGCTGCTGCGAGTGCAGTATTCCTCGTCTATCCTTTCGGTCA 179306 |||||| || || || || || || || | ||| || ||| | |||||||| | ||||| Sbjct 47750188 TGCATATTCAGCTCCTGTTGCAGCCGCTACTGCTGTTTTCTTGATCTATCCTATTGGTCA 47750247 Query 179307 AGGTTCTTTCTCTGATGCTATGCCTCTTGGTATCTCTGGTACTTTTAACTACATGCTTGT 179366 ||| || || |||| ||||||| | || || ||||||||||| || | ||| |||| Sbjct 47750248 AGGAAGCTTTTCGGATGGTATGCCTTTAGGAATTTCTGGTACTTTCAATTTTATGATTGT 47750307 Query 179367 ATTCCAAGCAGAACACAACATCCTTATGCACCCGTT 179402 ||| || || || || || || |||||||| || || Sbjct 47750308 ATTTCAGGCTGAGCATAATATTCTTATGCATCCATT 47750343 >seq9 Length=37469608 Score = 143 bits (158), Expect = 3e-29 Identities = 366/550 (67%), Gaps = 8/550 (1%) Strand=Plus/Plus Query 178908 GTTCGGTGTGCTGATGATTCCTACGTTGCTTGCTGCAACTATCTGT-TTCATCGTTGCTT 178966 ||| ||||| |||||||||||| || | | ||||| | ||| || || | |||| Sbjct 1917761 GTTTGGTGTTTTGATGATTCCTATTGTGTTAACCACAACT-TTTGTATTTATTATCGCTT 1917819 Query 178967 TCGTAGCAGCACCTCCCGTCGATATTGACGGCATCCGTGAACCCGTCGCTGGTTCACTCA 179026 | | | || ||||| || |||| ||| || || | || || || ||| || || Sbjct 1917820 TTATCGTTGCCCCTCCAGTGGATAATGATGGTATTCACGAGCCTGTTTTTGGATCCCTAC 1917879 Query 179027 TGTATGGAAACAACATCATCTCTGGTGCTGTTGTCCCAAGTTCAAACGCAATTGGTCTAC 179086 | ||||||||||| ||||| |||||||| | | | | || || || | | | | Sbjct 1917880 TTTATGGAAACAATATCATTTCTGGTGCGACTATTCATACTTTTGCGGCTATAGATTTGC 1917939 Query 179087 ACTTCTACCCCATCTGGGAAGCAGCATCACTCGATGAGTGGCTGTATAACGGTGGTCCTT 179146 | || || || || ||||||| | | | ||||| || || || |||| ||||||| Sbjct 1917940 ATTTTTATCCTATATGGGAAGTGACTTTTGTTGATGAATGCCTATACAACGACGGTCCTT 1917999 Query 179147 TCCAACTGGTAGTCTTCCA---CTTCCTTATCGGCATCTATGCCTATATGGGACGTGAGT 179203 |||| | || | || ||| |||| | | || || ||| ||||| ||||| | Sbjct 1918000 ATGAACTAATTGTTCTACATTTCTTACTTA-GTGTAGCT-TG-CTACATGGGTCGTGAAT 1918056 Query 179204 GGGAACTTTCTTACCGTCTAGGTATGCGTCCATGGATCTGTGTTGCATACTCTGCACCAG 179263 |||||||| | ||| | ||||||| || ||||| ||||||||| || | || | Sbjct 1918057 GGGAACTTAACTTTCGTTTGGGTATGCATCATTGGATTGCTGTTGCATATTCAACTCCTG 1918116 Query 179264 TCGCTGCTGCGAGTGCAGTATTCCTCGTCTATCCTTTCGGTCAAGGTTCTTTCTCTGATG 179323 || |||| | || || ||| | |||||||| | |||||||| || || |||| Sbjct 1918117 ATGCAGCTGTTATTGTTGTTTTCTTGATCTATCCTATTGGTCAAGGAAGCTTTTCGGATG 1918176 Query 179324 CTATGCCTCTTGGTATCTCTGGTACTTTTAACTACATGCTTGTATTCCAAGCAGAACACA 179383 |||||| | || || | ||||||||| || | ||| ||||||| || || || | Sbjct 1918177 GAATGCCTTTAGGAATTTATGGTACTTTCAATTTTATGATTGTATTTCAGATTGAGCATA 1918236 Query 179384 ACATCCTTATGCACCCGTTCCATATGCTCGGTGTTGCTGGGGTATTCGGTGGATCTCTTT 179443 | || |||||||| | || || || | |||| |||| ||||| || || || | Sbjct 1918237 ATATTCTTATGCATCAATTTCACGTGTTAAGTGTGACTGGTGTATTTGGCAACTCCCTAT 1918296 Query 179444 TCTCTGCTAT 179453 || |||||| Sbjct 1918297 TCAGTGCTAT 1918306 >seq1 Length=52205531 Score = 134 bits (148), Expect = 2e-26 Identities = 157/212 (74%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 180729 CGCTTCTGGTCGCAGATCTTCGGTATTGCATTTTCTAACAAGCGGTGGCTTCATTTTTTC 180788 ||||| ||||| || ||||| || |||| ||||| || || || ||| | ||||| || Sbjct 38350081 CGCTTTTGGTCCCAAATCTTTGGGGTTGCTTTTTCCAATAAACGTTGGTTACATTTCTTT 38350140 Query 180789 ATGTTGTTTGTGCCTGTTATGGGTCTATGGACATCCTCTATTGGCATTATTGGTCTTGCT 180848 ||||| ||||| || || | ||| |||||| || |||| | | ||| | || Sbjct 38350141 ATGTTATTTGTACCAGTAACTGGTTTATGGATGAGTGCTCTTGGGGTAGTCGGTTTGGCC 38350200 Query 180849 CTCAACCTTCGTGCTTACGATTTCGTGAGTCAAGAGATCAGAGCAGCAGAAGATCCTGAG 180908 || ||| | |||||||| |||||||| |||||| ||| | ||||| ||||||||||| Sbjct 38350201 CTGAACTTACGTGCTTATGATTTCGTTTCTCAAGAAATCCGCGCAGCGGAAGATCCTGAA 38350260 Query 180909 TTCGAGACGTTCTACACCAAGAACATCCTATT 180940 || ||||| ||||||||||| || || || || Sbjct 38350261 TTTGAGACTTTCTACACCAAAAATATTCTCTT 38350292 >seq8 Length=59662532 Score = 84.2 bits (92), Expect = 3e-11 Identities = 102/139 (73%), Gaps = 0/139 (0%) Strand=Plus/Plus Query 179708 GTTTCAACTTCAACCAGTCCATCCTTGACGGTCAAGGACGTGTCCTTAACACATGGGCGG 179767 |||| || |||||||| ||| | |||| ||||||| ||||| | || || ||||| | Sbjct 31293220 GTTTTAATTTCAACCAATCCGTAGTTGATAGTCAAGGTCGTGTAATAAATACCTGGGCTG 31293279 Query 179768 ACGTATTGAACCGTGCAGGTTTGGGTATGGAAGTTATGCATGAGCGTAACGCACACAACT 179827 | | | ||||| || | ||||||||||| |||||||| ||||| || || || | Sbjct 31293280 ATATTATTAACCGAGCTAACCTTGGTATGGAAGTCATGCATGAACGTAATGCTCATAATT 31293339 Query 179828 TCCCACTCGACCTTGCTGC 179846 |||| || || || ||||| Sbjct 31293340 TCCCTCTAGATCTAGCTGC 31293358 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 610324198583040