Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phaseolus_20vulgaris_20[refseq_20GCF_5F000499845.1_202013-11-29] 708 sequences; 521,076,696 total letters Query= NC_027213.1 Length=214699 Score E Sequences producing significant alignments: (Bits) Value seq2 132 7e-26 seq9 109 8e-19 >seq2 Length=49040938 Score = 132 bits (146), Expect = 7e-26 Identities = 163/223 (73%), Gaps = 0/223 (0%) Strand=Plus/Plus Query 69750 TCCTCCCTGATCTATGTATCTGGCAGTGTTATTATAGACTCTCAGCATCGGAATAATACC 69809 ||| || ||||| | || | ||||| | ||| | || | |||||| |||| |||||| Sbjct 43314766 TCCCCCTTGATCAACATAACGAGCAGTATCATTGAACACACGCAGCATTGGAACAATACC 43314825 Query 69810 ATTAGATTTACCATTTGTTCCAGAAATATAACTTCCTCTTGCGCGAATATTACTAATAGA 69869 ||| ||| | |||||||| ||| || ||||| ||| | || |||||||| || ||| Sbjct 43314826 ATTTGATGTCCCATTTGTGCCACGGATGTAACTGCCTGTGGCACGAATATTGTGAACAGA 43314885 Query 69870 TAGACCTATTCCTCCTGCCATTTTAGAGATTAGAGCACAACGTTTCAATGTGTCATATAT 69929 | ||| |||||||| || ||| || | |||||| |||||| ||||||||||| Sbjct 43314886 AACACCAATTCCTCCAGCTGATTTGCTAATGATAGCACACTCTTTCAAAGTGTCATATAT 43314945 Query 69930 ACCCTCTATGCTATCATCTATCATGTTAAGAAGAAAACAGCTA 69972 |||||||| ||||||||| ||||| | ||| || || ||| Sbjct 43314946 TCCCTCTATACTATCATCTTTCATGCACACAAGGAAGCAACTA 43314988 Score = 84.2 bits (92), Expect = 3e-11 Identities = 157/229 (69%), Gaps = 4/229 (2%) Strand=Plus/Plus Query 69991 GTTCCCGCATTAAATAATGTAGGAGATGCGTGAGTGAACCATTTTTCAGAAAGCAGATTG 70050 ||||| ||||| || | || |||||||| |||||||||||| || ||| | || || | Sbjct 43315123 GTTCCTGCATTGAAAAGAGTTGGAGATGCATGAGTGAACCATCGTTGAGACATCAAATGG 43315182 Query 70051 TATGTTTCAATAGCTGATTCTATATCCCACTGATGAATTCCTATCGCGACACGCATCAAC 70110 || || | | ||| || || || || | |||||| || | || || | ||||||| Sbjct 43315183 TAAGTCTGGACAGCAGAGTCAATGTCATCTTTATGAATCCCAACAGCAACCCTCATCAAC 43315242 Query 70111 ATATGCTGAGGTCGTTCTAC--CGTTTTATTATTTATTTTCAACAGGTATGATTTTTCCA 70168 || || || |||| || || | ||| | | | || || ||||| || | |||| Sbjct 43315243 ATGTGTTGTGGTCTCTCCACAACCTTTCCT--TGAACCTTTAAGAGGTAAGACCTCTCCA 43315300 Query 70169 GAGTTTTAAACCCAAAATAGTTGTATGAAAAGTCTCTTTCGTAAATAAT 70217 | ||||| || ||||| || | ||| |||||| || || || || || Sbjct 43315301 GGGTTTTGAAACCAAAGTAATCATATTCAAAGTCCCTGTCATAGATTAT 43315349 >seq9 Length=37469608 Score = 109 bits (120), Expect = 8e-19 Identities = 158/223 (71%), Gaps = 0/223 (0%) Strand=Plus/Minus Query 69750 TCCTCCCTGATCTATGTATCTGGCAGTGTTATTATAGACTCTCAGCATCGGAATAATACC 69809 ||| |||||||| | || | |||||| | ||| | || | | ||| |||| |||||| Sbjct 17262934 TCCCCCCTGATCAACATAGCGGGCAGTATCATTGAACACACGTAACATTGGAACAATACC 17262875 Query 69810 ATTAGATTTACCATTTGTTCCAGAAATATAACTTCCTCTTGCGCGAATATTACTAATAGA 69869 || || | |||||||| ||| ||||||||| || | || ||||| || | ||| Sbjct 17262874 GTTGGACGTCCCATTTGTCCCACGAATATAACTACCCGTAGCACGAATGTTGTGGACAGA 17262815 Query 69870 TAGACCTATTCCTCCTGCCATTTTAGAGATTAGAGCACAACGTTTCAATGTGTCATATAT 69929 | |||||||||||| || ||| || | ||||| ||||| || |||||||| Sbjct 17262814 GACACCTATTCCTCCAGCTGATTTGCTAATGATGGCACACTCCTTCAAAGTTTCATATAT 17262755 Query 69930 ACCCTCTATGCTATCATCTATCATGTTAAGAAGAAAACAGCTA 69972 ||||||||||||||||| ||||| | || || |||||| Sbjct 17262754 CCCCTCTATGCTATCATCATTCATGCACACGAGGAAGCAGCTA 17262712 Score = 100 bits (110), Expect = 4e-16 Identities = 159/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 69990 AGTTCCCGCATTAAATAATGTAGGAGATGCGTGAGTGAACCATTTTTCAGAAAGCAGATT 70049 |||||| ||||| || | ||| |||||||| || ||||||||| || ||| | || | Sbjct 17262567 AGTTCCAGCATTGAAAAGTGTTGGAGATGCATGGGTGAACCATCGTTGAGACATCATGTG 17262508 Query 70050 GTATGTTTCAATAGCTGATTCTATATCCCACTGATGAATTCCTATCGCGACACGCATCAA 70109 ||| ||| | ||| |||||||| || || ||||| || | |||||| | |||||| Sbjct 17262507 GTAAGTTCTGACAGCAGATTCTATGTCATCCTTGTGAATCCCAACCGCGACTCTCATCAA 17262448 Query 70110 CATATGCTGAGGTCGTTCTACCGTTTTATTATTTATTTTCAACAGGTATGATTTTTCCAG 70169 ||| || || || | ||| || | | | ||||| ||||| || | || || Sbjct 17262447 CATGTGTTGGGGCCTTTCAACAACCTGCCCTTGAACCTTCAAGAGGTAAGACCTCTCGAG 17262388 Query 70170 AGTTTTAAACCCAAAATAGTTGTATGAAAAGTCTCTTTCGTAAATAAT 70217 ||||| ||||||||||| | || |||||| || || ||||| || Sbjct 17262387 GGTTTTGAACCCAAAATAATCATAGTCAAAGTCCCTGTCATAAATTAT 17262340 Score = 84.2 bits (92), Expect = 3e-11 Identities = 90/119 (76%), Gaps = 0/119 (0%) Strand=Plus/Minus Query 68733 TAACACTCTACGAGTGTAAATATTACTGGTATATGGTTCCACAGATTCATTATTTCCCAG 68792 ||| ||||||||| |||| ||||| ||||||||||| | | ||||||||||| || Sbjct 17264885 TAAAACTCTACGACTGTAGATATTTGAAGTATATGGTTCAAAGCACTCATTATTTCCAAG 17264826 Query 68793 AATTTGAGCAGTTGATGCAGTTGGCATAGGTGCCACCAATAAACTATTTCTAAGACCAT 68851 ||| || ||| |||||||| |||||||| ||||| | | |||||| | ||||| Sbjct 17264825 AATCTGGCTAGTGGATGCAGTAGGCATAGGAGCCACGAGAAGTGAATTTCTCACACCAT 17264767 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 686902720857120