Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phaseolus_20vulgaris_20[refseq_20GCF_5F000499845.1_202013-11-29] 708 sequences; 521,076,696 total letters Query= NC_027923.1 Length=132831 Score E Sequences producing significant alignments: (Bits) Value seq2 111 1e-19 seq3 107 2e-18 seq7 87.8 2e-12 >seq2 Length=49040938 Score = 111 bits (122), Expect = 1e-19 Identities = 147/204 (72%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 27051 GTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTCTTCGAGCTGTTTACCG 27110 || || || || || || ||||||||| | | |||| |||| |||||||| || ||| Sbjct 7435695 GTGGACTCCTTCTGGATGTTGTAGTCGGCGAGGGTGCGGCCGTCCTCGAGCTGCTTTCCG 7435636 Query 27111 GCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCGATCTTGTTTTTC 27170 ||| | ||||||||||| ||||||||||| | ||||| || || ||||||| || Sbjct 7435635 GCGAATATGAGACGCTGCTGATCCGGCGGGATGCCCTCCTTGTCCTGGATCTTGGCCTTG 7435576 Query 27171 AGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTTGCCCGTCAGAGTT 27230 | | || | ||||| | | || || || || || || | ||| ||||| || ||| Sbjct 7435575 ACATTGTCGATGGTGTCCGAAGACTCCACCTCAAGGGTGATGGTTTTCCCCGTAAGGGTT 7435516 Query 27231 TTCACAAAGATTTGCATAGCTGCT 27254 ||||| || || ||||| |||||| Sbjct 7435515 TTCACGAATATCTGCATCGCTGCT 7435492 Score = 109 bits (120), Expect = 5e-19 Identities = 146/203 (72%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 27051 GTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTCTTCGAGCTGTTTACCG 27110 || || || || || || ||||||||| | | |||| |||| |||||||| || ||| Sbjct 7451105 GTGGACTCCTTCTGGATGTTGTAGTCGGCGAGGGTGCGACCGTCCTCGAGCTGCTTTCCG 7451046 Query 27111 GCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCGATCTTGTTTTTC 27170 ||| | ||||||||||| |||||||| || | ||||| || || ||||||| || Sbjct 7451045 GCGAAGATGAGACGCTGCTGATCCGGTGGGATTCCCTCCTTGTCCTGGATCTTGGCCTTG 7450986 Query 27171 AGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTTGCCCGTCAGAGTT 27230 | | || | ||||||| | || || || || || |||| || ||||| || ||| Sbjct 7450985 ACATTGTCGATGGTGTCTGAAGACTCCACCTCAAGGGTGATAGTCTTCCCCGTGAGGGTT 7450926 Query 27231 TTCACAAAGATTTGCATAGCTGC 27253 ||||| || || ||||| ||||| Sbjct 7450925 TTCACGAATATCTGCATTGCTGC 7450903 >seq3 Length=52284309 Score = 107 bits (118), Expect = 2e-18 Identities = 142/197 (72%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 27051 GTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTCTTCGAGCTGTTTACCG 27110 || || || ||||| |||||||| ||| | |||| | || ||||| || ||||| Sbjct 30378148 GTGGATTCCTTTTGGATATTGTAATCGGCAAGAGTGCGACCATCCTCGAGTTGCTTACCA 30378089 Query 27111 GCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCGATCTTGTTTTTC 27170 ||| |||| || | ||| |||||||| || | ||| ||||| || |||||| || Sbjct 30378088 GCGAAAATCAGCCTCTGCTGATCCGGAGGGATACCTTCTTTGTCCTGGATCTTAGCCTTG 30378029 Query 27171 AGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTTGCCCGTCAGAGTT 27230 | | || | ||||| | || ||| || || || || |||| |||||| |||| |||| Sbjct 30378028 ACATTATCAATGGTGTCAGAGGATTCCACCTCGAGGGTGATAGTTTTGCCTGTCAAAGTT 30377969 Query 27231 TTCACAAAGATTTGCAT 27247 ||||||||||| ||||| Sbjct 30377968 TTCACAAAGATCTGCAT 30377952 Score = 86.0 bits (94), Expect = 5e-12 Identities = 155/227 (68%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 27021 CCTCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTC 27080 || || || | || ||| ||||| || | ||||| ||||| || ||||| || || Sbjct 30284454 CCACCACGAAGCCTCAAAACCAAGTGCAGAGTAGATTCTTTCTGGATATTATAATCCGCA 30284395 Query 27081 ATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGC 27140 | | | | | ||||| |||||||| ||||| | || || | ||| || || || || Sbjct 30284394 AGGGTTCTTCCATCTTCAAGCTGTTTCCCGGCAAAGATAAGCCTCTGCTGGTCTGGGGGA 30284335 Query 27141 ACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACT 27200 | |||||| ||||| |||||| ||||| | || | ||||||| || || Sbjct 30284334 ATACCCTCCTTATCCTGAATCTTGGCTTTCACATTATCAATGGTGTCTGAACTCTCCACC 30284275 Query 27201 TCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCAT 27247 || | || || | ||| || |||| ||| || |||||||||||||| Sbjct 30284274 TCCAAGGTAATGGTTTTCCCGGTCAAAGTCTTGACAAAGATTTGCAT 30284228 >seq7 Length=51758522 Score = 87.8 bits (96), Expect = 2e-12 Identities = 138/198 (70%), Gaps = 0/198 (0%) Strand=Plus/Minus Query 27051 GTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTCTTCGAGCTGTTTACCG 27110 ||||| || || ||||| || ||||| | | | | | |||| || ||||| || || Sbjct 4237406 GTAGACTCCTTCTGAATGTTATAGTCAGCAAGGGTCCTCCCGTCCTCAAGCTGCTTCCCA 4237347 Query 27111 GCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCGATCTTGTTTTTC 27170 ||| | || | | ||| |||||||| || | |||||| ||||| ||||||| ||| Sbjct 4237346 GCGAAGATCAACCTCTGCTGATCCGGGGGAATACCCTCCTTATCCTGGATCTTGGCCTTC 4237287 Query 27171 AGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTTGCCCGTCAGAGTT 27230 | | || | |||||| | || || || ||||| |||| || || || || || Sbjct 4237286 ACATTGTCAATAGTGTCCGAACTCTCCACCTCAAGAGTAATAGTCTTACCAGTGAGGGTC 4237227 Query 27231 TTCACAAAGATTTGCATA 27248 ||||||||||| |||||| Sbjct 4237226 TTCACAAAGATCTGCATA 4237209 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 424930733347296