Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phaseolus_20vulgaris_20[refseq_20GCF_5F000499845.1_202013-11-29] 708 sequences; 521,076,696 total letters Query= NC_028093.1 Length=182309 Score E Sequences producing significant alignments: (Bits) Value seq9 145 9e-30 seq2 131 2e-25 seq1 127 2e-24 >seq9 Length=37469608 Score = 145 bits (160), Expect = 9e-30 Identities = 286/417 (69%), Gaps = 12/417 (3%) Strand=Plus/Plus Query 9556 ATCAAGGATATCAACGCGATTCGTCGCGGCGATGACAACAATACCTGTTTCATTATCAAA 9615 |||||| || ||| | | || || || || ||||||| ||||| || | | ||||| Sbjct 35454555 ATCAAGAATGTCAGCCCTGTTAGTAGCTGCAATGACAATGATACCCGTATTACCCTCAAA 35454614 Query 9616 ACCATCCATCTCTGTCAAAAGTTGGTTAATAGTTTGTTCCCGTTCATCATTCGCTGGCAT 9675 |||||||| ||||||||||||||||| | || ||||| | |||||||||| || Sbjct 35454615 TCCATCCATTTCTGTCAAAAGTTGGTTGAGGGTCTGTTCTCTTTCATCATTCCCT---CC 35454671 Query 9676 ACCA---CCAGCACTGCGTTGCTTTCCCACGGCATCAATCTCATCAATGAAGACGATGCA 9732 |||| |||| || | |||| |||| || |||||||| ||||||| || || ||||| Sbjct 35454672 ACCAATTCCAGTACCCCTTTGCCTTCCAACAGCATCAATTTCATCAACAAAAACAATGCA 35454731 Query 9733 TGGTTGATTTTCGCGAGCGACTTC--AAAGAGATCCCGTACACGCTTGGCGCCCACACCA 9790 ||| ||| || || |||| || | ||| || || || || || |||||| Sbjct 35454732 TGGAGCATTCTCTTTGGC--CTTCTTGAATAAATCGCGAACTCGAGAAGCACCAACACCA 35454789 Query 9791 ACAAACATCTCCACAAAGTTTGCGGCGGAACATTG-GATGAAGGGGACATTAGATTCACC 9849 ||||||||||| ||||| | | | | | |||| | || |||||| | |||||| Sbjct 35454790 ACAAACATCTCTACAAACTCAGAACCTG-AGATTGAAAAAAATGGGACACCTGCTTCACC 35454848 Query 9850 CGCAATGGCTCGGGCGAGAAGAGTCTTACCCGTACCTGGCTTACCCGCGAGGAGGGCACC 9909 ||||| || || | ||| ||||| || || || || ||| | || || |||| Sbjct 35454849 TGCAATAGCCTTTGCTAAAAGTGTCTTCCCAGTTCCAGGAGGACCAACAAGAAGAACACC 35454908 Query 9910 TCGTGGAATCTTGGCGCCACTTCCAAAGTATCTCTCAGGTTGCTTAAGAAAATCCAC 9966 | ||| || || ||| || | |||||||||| | |||||||| ||||| Sbjct 35454909 TTTTGGTATGCGAGCCCCAACAGCAGTGAATCTCTCAGGCTTTTTAAGAAATTCCAC 35454965 Score = 93.3 bits (102), Expect = 5e-14 Identities = 247/372 (66%), Gaps = 14/372 (4%) Strand=Plus/Minus Query 9613 AAAACCATCCATCTCTGTCAAAAGTTGGTTAATAGTTTGTTCCCGTTCATCATTCGCTGG 9672 ||| ||||||||||| || | ||| |||||||| || ||||||| ||||| ||| | Sbjct 4469779 AAACCCATCCATCTCCGTGAGAAGCTGGTTAATGGTCTGTTCCCTCTCATCGTTCCC--A 4469722 Query 9673 CATACCA--CCAGCACTGCGTTGCTTTCCCACGGCATCAATCTCATCAATGAAGACGATG 9730 | | | | || || | | ||| | || ||||| ||||||||||||||||| || ||| Sbjct 4469721 CCTCCAAGCCCCGCCCCTCTCTGCCTCCCGACGGCGTCAATCTCATCAATGAAAACAATG 4469662 Query 9731 CATGG----TTGATTTTCGCGAGCGACTTCAAAGAGATCCCGTACACGCTTGGCGCCCAC 9786 || || || | ||||| | ||||| | ||||| || | | || || || Sbjct 4469661 CACGGCGCCTTATTCTTCGCCTTC----TCAAACAAATCCCTCACCCTCGACGCACCAAC 4469606 Query 9787 ACCAACAAACATCTCCACAAAGTTTGCGGCGGAACATTGGATGAAGGGGACATTAGATTC 9846 || ||||||| |||||| || | || || | || || || || || | ||| Sbjct 4469605 CCCCACAAACAGCTCCACGAACTCTGAAGCCGCGCACGAGAAAAACGGCACTCCCGCTTC 4469546 Query 9847 ACCCGCAATGGCTCGGGCGAGAAGAGTCTTACCCGTACCTGGCTTACCCGCGAGGAGGGC 9906 ||||| | || | || ||||| ||||| || || || || | |||| || | | Sbjct 4469545 CCCCGCCACAGCCCTAGCTAGAAGCGTCTTCCCGGTTCCCGG-TGGCCCGACCAGAAGAC 4469487 Query 9907 ACCTCGT-GGAATCTTGGCGCCACTTCCAAAGTATCTCTCAGGTTGCTTAAGAAAATCCA 9965 ||| | | |||||||| || || || ||| | ||||| | ||| | |||||| | Sbjct 4469486 ACCCCTTCGGAATCTTCGCACCCAGCGCAGTGTACTTATCAGGGTTCTTCAAAAAATCAA 4469427 Query 9966 CAATTTCTTCCA 9977 ||| |||| || Sbjct 4469426 CAACCTCTTGCA 4469415 Score = 89.7 bits (98), Expect = 6e-13 Identities = 162/231 (70%), Gaps = 6/231 (3%) Strand=Plus/Plus Query 104138 AGAGACTACGACTTTGGTTATTTTGGTCTCAAAACCCTTGAGAAGAGCTA--TCTTCAAC 104195 || |||| |||| || ||||||||| |||||||||| |||| | || |||| || Sbjct 17262352 AGGGACTTTGACTATGATTATTTTGGGTTCAAAACCCTCGAGAGGTCTTACCTCTTGAA- 17262410 Query 104196 GGCTCGATGGTGTCTTGATGGAAACCCCACAGTACATGTTCATGCGCGTGGCCATCGGTA 104255 || || | || ||| || || ||| || ||||||| ||| | || || | || | Sbjct 17262411 GGTTCAAGGGCAGGTTGTTGAAAGGCCC-CAACACATGTTGATGAGAGTCGCGGTTGGGA 17262469 Query 104256 TTCATGGGGAAGACATTGATTCTGTCTTGGAGA-CATACGACAAGATGTCCCAAGGTATG 104314 |||| ||| ||||| || |||| || ||| | ||| ||| |||||| ||| | | Sbjct 17262470 TTCACAAGGATGACATAGAATCTG-CTGTCAGAACTTACCACATGATGTCTCAACGATGG 17262528 Query 104315 TTCATTCACGCAACACCAACCCTCTTCAATGCTGGTACACCAAGACCCCAA 104365 |||| || ||| | ||||| || ||||||||||| || || || || ||| Sbjct 17262529 TTCACCCATGCATCTCCAACACTTTTCAATGCTGGAACTCCTAGGCCTCAA 17262579 >seq2 Length=49040938 Score = 131 bits (144), Expect = 2e-25 Identities = 282/416 (68%), Gaps = 12/416 (3%) Strand=Plus/Minus Query 9557 TCAAGGATATCAACGCGATTCGTCGCGGCGATGACAACAATACCTGTTTCATTATCAAAA 9616 ||||| ||||| | | || || || || ||||||| ||||| || | | |||||| Sbjct 34691625 TCAAGAATATCTGCCCTGTTAGTTGCTGCAATGACAATGATACCAGTATTACCCTCAAAA 34691566 Query 9617 CCATCCATCTCTGTCAAAAGTTGGTTAATAGTTTGTTCCCGTTCATCATTCGCTGGCATA 9676 |||||||| ||||||||||||||||| | || || || | |||||||||| || | Sbjct 34691565 CCATCCATTTCTGTCAAAAGTTGGTTCAGGGTCTGCTCTCTTTCATCATTCCCT---CCA 34691509 Query 9677 CCA---CCAGCACTGCGTTGCTTTCCCACGGCATCAATCTCATCAATGAAGACGATGCAT 9733 ||| |||| | | ||| |||| || |||||||| ||||||| ||||| ||||| Sbjct 34691508 CCAATTCCAGTTCCTCTTTGTCTTCCAACAGCATCAATTTCATCAACAAAGACAATGCAA 34691449 Query 9734 GGTTGATTTTCGCGAGCGACTTC--AAAGAGATCCCGTACACGCTTGGCGCCCACACCAA 9791 || ||| || || |||| || | ||| || || || || || ||||||| Sbjct 34691448 GGGGCATTCTCTTTGGC--CTTCTTGAACAAATCACGAACTCGAGAAGCACCAACACCAA 34691391 Query 9792 CAAACATCTCCACAAAGTTTGCGGCGGAACATTG-GATGAAGGGGACATTAGATTCACCC 9850 |||||||||| ||||| | | | | | |||| | ||||| ||| || |||||| Sbjct 34691390 CAAACATCTCAACAAACTCAGAACCAG-ATATTGAAAAAAAGGGAACACCAGCTTCACCA 34691332 Query 9851 GCAATGGCTCGGGCGAGAAGAGTCTTACCCGTACCTGGCTTACCCGCGAGGAGGGCACCT 9910 ||||| || ||| | || ||||| || || ||||| ||| | || || | ||| Sbjct 34691331 GCAATAGCCTTGGCTAACAGGGTCTTTCCAGTTCCTGGAGGACCAACAAGAAGAACTCCT 34691272 Query 9911 CGTGGAATCTTGGCGCCACTTCCAAAGTATCTCTCAGGTTGCTTAAGAAAATCCAC 9966 || || || ||| || | | |||||||| | ||| ||||| ||||| Sbjct 34691271 TTAGGTATGCGAGCCCCAACAGCAGTGAACCTCTCAGGCTTCTTTAGAAACTCCAC 34691216 >seq1 Length=52205531 Score = 127 bits (140), Expect = 2e-24 Identities = 118/150 (79%), Gaps = 0/150 (0%) Strand=Plus/Minus Query 94795 TCCTTTGCTGAGCGACTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTCTGGTTCC 94854 ||||| || ||||| || | || || || || || ||||| ||||||||||| || | Sbjct 19482751 TCCTTCGCCGAGCGCATCGTTGCCTTCGCCTGCGTCGAGGGAATCTTCTTCTCCGGAAGC 19482692 Query 94855 TTCTGCGCTATTTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTTCTCCAAC 94914 || ||| |||| | ||||||||||||||||| |||||||| || || |||||||||| Sbjct 19482691 TTTTGCTCTATCTTCTGGCTCAAGAAGCGAGGCCTCATGCCGGGACTTACCTTCTCCAAC 19482632 Query 94915 GAGCTTATCTCTCGTGACGAGGGACTCCAC 94944 || || ||||| || |||||||| |||||| Sbjct 19482631 GAACTCATCTCCCGCGACGAGGGGCTCCAC 19482602 Score = 113 bits (124), Expect = 5e-20 Identities = 115/150 (77%), Gaps = 0/150 (0%) Strand=Plus/Plus Query 94795 TCCTTTGCTGAGCGACTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTCTGGTTCC 94854 || || || ||||| || |||| || || || || ||||| |||||||||||||| | Sbjct 45626837 TCTTTCGCCGAGCGCATCGTCGCCTTCGCCTGCGTCGAGGGAATCTTCTTCTCTGGCAGC 45626896 Query 94855 TTCTGCGCTATTTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTTCTCCAAC 94914 |||||| | || | |||||||||||||| ||| | ||||| |||||| |||||||||| Sbjct 45626897 TTCTGCTCGATATTCTGGCTCAAGAAGCGCGGTTTGATGCCCGGTCTCACCTTCTCCAAC 45626956 Query 94915 GAGCTTATCTCTCGTGACGAGGGACTCCAC 94944 || || || || || || || || || ||| Sbjct 45626957 GAACTCATATCGCGAGATGAAGGGCTTCAC 45626986 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583255638141920