Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phaseolus_20vulgaris_20[refseq_20GCF_5F000499845.1_202013-11-29] 708 sequences; 521,076,696 total letters Query= NC_028108.1 Length=171454 Score E Sequences producing significant alignments: (Bits) Value seq1 181 1e-40 >seq1 Length=52205531 Score = 181 bits (200), Expect = 1e-40 Identities = 555/838 (66%), Gaps = 24/838 (3%) Strand=Plus/Minus Query 59593 TGTATAAGAAAGCGATCGGTTCATTCTGGTCCGTCGAGGAGATTGACCTC--GCCGGAGA 59650 |||| |||||||| | || |||||| | | |||||| | |||||| || ||| | Sbjct 19483128 TGTACAAGAAAGCTGAAGCCTCTTTCTGGACGGCGGAGGAGGTCGACCTCTCGCAGGACA 19483069 Query 59651 CCTGAAGGATTGGGACAAGCTCAATTACGACGAGCAGCATTTCATCAAGATGGTCCTGGC 59710 | | | ||||||| | || | | | ||||| |||||||||| ||||| || Sbjct 19483068 TCCG--GCATTGGGAGACTCTAACCGATGGCGAGCGCCATTTCATCACCCACGTCCTCGC 19483011 Query 59711 CTTCTTCGCGGCGAGTGATGGAATTGTGATGGAAAATATAGACATGAACTTTTCC--AAG 59768 ||||||||| || ||||| || || | ||||| | | | | | |||| ||| Sbjct 19483010 CTTCTTCGCCGCCTCCGATGGCATCGTCCTTGAAAACCTTGCC--GGCCGTTTCATGAAG 19482953 Query 59769 GATGTCCAGATTGCCGAGGCCCGGTCGTTCTACGCGTATCAG-TCGTTCAACGAGTCTAT 59827 || |||||| | |||||||||| | ||||||| | |||| ||| || |||| || Sbjct 19482952 GAGGTCCAGGTCTCCGAGGCCCGCGCCTTCTACGGCTTTCAGATCGC-CATCGAGAACAT 19482894 Query 59828 CCACTCCGAGACGTACTCGCTCATGATCGATAAGTTGGTCAAGGATCCGGAAGAGAAGGC 59887 |||||||||| |||| ||| | | || | | | || || | |||||||| | Sbjct 19482893 TCACTCCGAGATGTACAGCCTCCTCCTTGAAACCTACATAAAAGACTCCAAAGAGAAGAC 19482834 Query 59888 TGGTCTGTTCCGTGCCATAGAGACG-TCCCCCGCAGTTAAACAAAAAGCAGAATGGGCCA 59946 |||| |||| ||||| || || | ||| || || | | || || | |||||| Sbjct 19482833 CCGTCTCTTCCACGCCATTGACACTATTCCCTGC-GTCACCAAGAAGGCTAACTGGGCCC 19482775 Query 59947 TGCAGTGGAT-GAGTCCTGGAGCATCATTTGCACAACGTCTCATAGCTTTTGCATGCGTG 60005 | | ||||| || ||| | | || || || | || || | || || || ||||| Sbjct 19482774 TACGCTGGATCGACTCC-GCCGAGTCCTTCGCCGAGCGCATCGTTGCCTTCGCCTGCGTC 19482716 Query 60006 GAAGGAATCTTCTTCTCTGGCTCGTTCTGTGCTATTTTCTGGCTCAAAAAGCGTGGCCTC 60065 || |||||||||||||| || || || |||| ||||||||||| ||||| |||||| Sbjct 19482715 GAGGGAATCTTCTTCTCCGGAAGCTTTTGCTCTATCTTCTGGCTCAAGAAGCGAGGCCTC 19482656 Query 60066 ATGCCGGGCCTGAGTTTCTCCAACGAGCTGATTTCCCGGGACGAGGGCCTCCATCAGGAG 60125 |||||||| || | ||||||||||| || || ||||| |||||||| ||||| || Sbjct 19482655 ATGCCGGGACTTACCTTCTCCAACGAACTCATCTCCCGCGACGAGGGGCTCCACTGCGAC 19482596 Query 60126 TTTGCAGTGAC-GCTCTATTCACACCTATTGGAAAAATGCCCTTCCAAGGA---TATTCA 60181 || || ||| | |||||| || | || | || | || | || |||| | Sbjct 19482595 TTCGC-GTGCCTGCTCTACTCTATC--ATGCGGAACAAGCTC-CCCGAGGAGCGCGTGAG 19482540 Query 60182 CAAGATTGTTCAGTGGGCTTGTGAAGTGGAGAGCGAGTTCATCACAGAAGCGCTTCCATG 60241 |||| || | || ||| | ||||| ||||| || || |||||||| || Sbjct 19482539 GGAGATCGTGCGCGATGCAGTTGACATCGAGAGGGAGTTTGTCTGCGACGCGCTTCCTTG 19482480 Query 60242 CAAACTCATAGGTATGGACGCTGGAGAAATGACGCAGTACATTCAGTTTGTCGCGGACCG 60301 | | | || ||| ||| | |||| ||||||| ||||||| || || | Sbjct 19482479 CGCGTTGGTGGGGATGAACGGGGCCTTGATGAGTGTGTACATTGAGTTTGTTGCTGATAG 19482420 Query 60302 CCT-CATGGCCCAGTTTGGAGAAGGACCAATTTACGGCGTGAATAACCCTTTCGACTGGA 60360 | | || | || || | ||| | ||| ||| | ||||| ||||| |||| Sbjct 19482419 GTTGCTCGGTGCGCTTGGGTGCGGGA-AGCTGTACAATGTGCAGAACCCGTTCGATTGGA 19482361 Query 60361 TGGAGACCATCTCGTTGGAAGGGAAGACCAACTTCTTTGAGAAGCGGGTCGGGGATTA 60418 ||||| || ||| || | ||||||||||||||||| |||||||| || ||||| || Sbjct 19482360 TGGAGCTTATTTCGCTGCAGGGGAAGACCAACTTCTTCGAGAAGCGCGTGGGGGAGTA 19482303 Score = 132 bits (146), Expect = 5e-26 Identities = 355/532 (67%), Gaps = 12/532 (2%) Strand=Plus/Plus Query 59593 TGTATAAGAAAGCGATCGGTTCATTCTGGTCCGTCGAGGAGATTGACCTCGCCGGAGACC 59652 |||| |||||||| | || |||||| ||| ||| ||| ||||||| || ||||| Sbjct 45626460 TGTACAAGAAAGCCGAAGCCTCTTTCTGGACCGCCGAAGAGGTTGACCTTTCCCAAGACC 45626519 Query 59653 TGAAGGATTGGGACAAGCTCAATTACGACGAGCAGCATTTCATCAAGATGGTCCTGGCCT 59712 | | |||||| |||| ||| ||||| || ||||||| ||||| |||| Sbjct 45626520 TCCGCCACTGGGACTCCCTCACCGACGGCGAGCGCCACTTCATCACCCACGTCCTCGCCT 45626579 Query 59713 TCTTCGCGGCGAGTGATGGAATTGTGATGGAAAATATAGACATGAACTTTTCCAAGGATG 59772 |||| || || || || || || | ||||| | | | ||| ||||| Sbjct 45626580 TCTTTGCCGCCTCCGACGGTATCGTTCTCGAAAACCTCGCCGCCCGCTTCATGAAGGAAA 45626639 Query 59773 TCCAGATTGCCGAGGCCCGGTCGTTCTACGCGTATCAG-TCGTTCAACGAGTCTATCCAC 59831 |||| | |||||||||| | ||||||| | ||| ||| || |||| |||||| Sbjct 45626640 TCCAAGTCTCCGAGGCCCGTGCTTTCTACGGCTTCCAGATCGC-CATCGAGAACATCCAC 45626698 Query 59832 TCCGAGACGTACTCGCTCATGATCGATAAGTTGGTCAAGGA-TCCG--GAAGAGAAGGCT 59888 ||||||| |||| ||| | | || | | |||| || ||| ||| |||| Sbjct 45626699 TCCGAGATGTACAGCCTCCTCTTGGAAACCTACATCAAAGACTCCACCGAAAAGAACCAC 45626758 Query 59889 GGTCTGTTCCGTGCCATAGAGACG-TCCCCCGCAGTTAAACAAAAAGCAGAATGGGCCAT 59947 |||||||||||| |||| || ||||| || || | || ||| | |||||| | Sbjct 45626759 ---CTGTTCCGTGCCGTAGACACCATCCCCTGC-GTCGCCAAGAAGGCACAGTGGGCCTT 45626814 Query 59948 GCAGTGGAT-GAGTCCTGGAGCATCATTTGCACAACGTCTCATAGCTTTTGCATGCGTGG 60006 || ||||| || || | || || || | || || | || || || ||||| | Sbjct 45626815 GCGCTGGATCGACGCCACCGAC-TCTTTCGCCGAGCGCATCGTCGCCTTCGCCTGCGTCG 45626873 Query 60007 AAGGAATCTTCTTCTCTGGCTCGTTCTGTGCTATTTTCTGGCTCAAAAAGCGTGGCCTCA 60066 | |||||||||||||||||| ||||| | || ||||||||||| ||||| || | | Sbjct 45626874 AGGGAATCTTCTTCTCTGGCAGCTTCTGCTCGATATTCTGGCTCAAGAAGCGCGGTTTGA 45626933 Query 60067 TGCCGGGCCTGAGTTTCTCCAACGAGCTGATTTCCCGGGACGAGGGCCTCCA 60118 |||| || || | ||||||||||| || || || || || || || || || Sbjct 45626934 TGCCCGGTCTCACCTTCTCCAACGAACTCATATCGCGAGATGAAGGGCTTCA 45626985 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 548519945555520