Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phaseolus_20vulgaris_20[refseq_20GCF_5F000499845.1_202013-11-29] 708 sequences; 521,076,696 total letters Query= NC_028663.1 Length=188632 Score E Sequences producing significant alignments: (Bits) Value seq7 163 3e-35 seq9 143 3e-29 seq8 91.5 2e-13 >seq7 Length=51758522 Score = 163 bits (180), Expect = 3e-35 Identities = 165/215 (77%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 176440 TACATGGGACGCCAATGGGAACTTAGTTACAGACTAGGCATGCGTCCTTGGATCTGTGTT 176499 |||||||| || |||| |||||||||| | || || |||||||||||||| |||| Sbjct 47750129 TACATGGGTCGTGAATGAGAACTTAGTTTTCGTCTGGGTATGCGTCCTTGGATTGCTGTT 47750188 Query 176500 GCATACTCTGCACCAGTATCTGCAGCGATGGCAGTTTTCCTCGTCTATCCATTCGGTCAA 176559 ||||| || || || || | || || | || |||||| | ||||||| | |||||| Sbjct 47750189 GCATATTCAGCTCCTGTTGCAGCCGCTACTGCTGTTTTCTTGATCTATCCTATTGGTCAA 47750248 Query 176560 GGATCTTTCTCTGATGGTATGCCTCTTGGCATTTCAGGTACATTCAACTTTATGTTTGTA 176619 ||| || || |||||||||||| | || ||||| ||||| ||||| |||||| ||||| Sbjct 47750249 GGAAGCTTTTCGGATGGTATGCCTTTAGGAATTTCTGGTACTTTCAATTTTATGATTGTA 47750308 Query 176620 TTCCAAGCAGAGCACAACATTCTAATGCACCCATT 176654 || || || ||||| || ||||| ||||| ||||| Sbjct 47750309 TTTCAGGCTGAGCATAATATTCTTATGCATCCATT 47750343 >seq9 Length=37469608 Score = 143 bits (158), Expect = 3e-29 Identities = 324/483 (67%), Gaps = 8/483 (2%) Strand=Plus/Plus Query 176206 TTTATCGTTGCATTTATTGCAGCACCACCTGTCGATATCGACGGTATTCGCGAACCAGTA 176265 ||||| | || ||||| | || || || || |||| || ||||||| ||| || || Sbjct 1917807 TTTATTATCGCTTTTATCGTTGCCCCTCCAGTGGATAATGATGGTATTCACGAGCCTGTT 1917866 Query 176266 GCAGGATCTCTACTCTATGGAAACAACATCATCTCAGGAGCAGTCGTCCCAAGCTCAAAC 176325 ||||| ||||| ||||||||||| ||||| || || || | | || || | Sbjct 1917867 TTTGGATCCCTACTTTATGGAAACAATATCATTTCTGGTGC-GACTATTCATACTTTTGC 1917925 Query 176326 G-CAATCGGACTACACTTCTACCCAATCTGGGAAGCAGCAACAGTTGACGAATGGCTCTA 176384 | | || | | || || || || || ||||||| | ||||| ||||| || || Sbjct 1917926 GGCTATAGATTTGCATTTTTATCCTATATGGGAAGTGACTTTTGTTGATGAATGCCTATA 1917985 Query 176385 CAATGGAGGACCATACCAACTCGTTGTATTCCACTTCCTTATCGGTATCTCAGCTT---A 176441 ||| | || || || |||| |||| | || ||| | | || | ||||| | Sbjct 1917986 CAACGACGGTCCTTATGAACTAATTGTTCTACATTTCTTACTTAGTGT---AGCTTGCTA 1918042 Query 176442 CATGGGACGCCAATGGGAACTTAGTTACAGACTAGGCATGCGTCCTTGGATCTGTGTTGC 176501 |||||| || |||||||||||| | | | || |||| || |||||| |||||| Sbjct 1918043 CATGGGTCGTGAATGGGAACTTAACTTTCGTTTGGGTATGCATCATTGGATTGCTGTTGC 1918102 Query 176502 ATACTCTGCACCAGTATCTGCAGCGATGGCAGTTTTCCTCGTCTATCCATTCGGTCAAGG 176561 ||| || | || | | || | || | |||||| | ||||||| | |||||||| Sbjct 1918103 ATATTCAACTCCTGATGCAGCTGTTATTGTTGTTTTCTTGATCTATCCTATTGGTCAAGG 1918162 Query 176562 ATCTTTCTCTGATGGTATGCCTCTTGGCATTTCAGGTACATTCAACTTTATGTTTGTATT 176621 | || || ||||| |||||| | || |||| ||||| ||||| |||||| ||||||| Sbjct 1918163 AAGCTTTTCGGATGGAATGCCTTTAGGAATTTATGGTACTTTCAATTTTATGATTGTATT 1918222 Query 176622 CCAAGCAGAGCACAACATTCTAATGCACCCATTCCATATGCTTGGAGTAGCAGGTGTGTT 176681 || ||||| || ||||| ||||| | ||| || || | | || | ||||| || Sbjct 1918223 TCAGATTGAGCATAATATTCTTATGCATCAATTTCACGTGTTAAGTGTGACTGGTGTATT 1918282 Query 176682 TGG 176684 ||| Sbjct 1918283 TGG 1918285 >seq8 Length=59662532 Score = 91.5 bits (100), Expect = 2e-13 Identities = 74/90 (82%), Gaps = 0/90 (0%) Strand=Plus/Plus Query 177009 TACATGGGGAGATATCCTTAACCGTGCAAACCTTGGTATGGAAGTTATGCACGAGCGTAA 177068 ||| |||| ||||| ||||||| || ||||||||||||||||| ||||| || ||||| Sbjct 31293269 TACCTGGGCTGATATTATTAACCGAGCTAACCTTGGTATGGAAGTCATGCATGAACGTAA 31293328 Query 177069 TGCTCACAACTTCCCACTTGACCTTGCTGC 177098 |||||| || ||||| || || || ||||| Sbjct 31293329 TGCTCATAATTTCCCTCTAGATCTAGCTGC 31293358 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 603489059074560