Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phaseolus_20vulgaris_20[refseq_20GCF_5F000499845.1_202013-11-29] 708 sequences; 521,076,696 total letters Query= NC_030656.1 Length=133492 Score E Sequences producing significant alignments: (Bits) Value seq1 87.8 2e-12 >seq1 Length=52205531 Score = 87.8 bits (96), Expect = 2e-12 Identities = 225/342 (66%), Gaps = 3/342 (1%) Strand=Plus/Plus Query 4548 CACGCAAAATCACAATGCAAACCTTCGTCTCTGCTAATCAGTTCGTTAGAAAACGTTAAT 4607 ||||| || || || || | || ||||| | | || |||||||| || || || | | Sbjct 19482588 CACGCGAAGTCGCAGTGGAGCCCCTCGTCGCGGGAGATGAGTTCGTTGGAGAAGGTAAGT 19482647 Query 4608 CCGGGCATTAAACCTCTCTTTTTAAGCCAAAATATAGCGGCAAATGACCCAGAAAAGAAT 4667 || ||||| | |||| ||| || ||||| || |||| | ||| || || ||||| Sbjct 19482648 CCCGGCATGAGGCCTCGCTTCTTGAGCCAGAAGATAGAGCAAAAGCTTCCGGAGAAGAAG 19482707 Query 4668 ATGCCTTCTACGGCGGCAAACGCTACTAATCGGGACCCGAACGAGCTGGCTTTGTCTTTA 4727 || || || ||| ||| || || || | || |||| || ||| ||| Sbjct 19482708 ATTCCCTCGACGCAGGCGAAGGCAACGATGCGCTCGGCGAAGGACTCGGCGGAGTCG--- 19482764 Query 4728 ATCCATTTTAATGCCCAGTTAGCTTTTTTCTTAACGCACGGAATTGTGTATATAGCGTTA 4787 ||||| || ||||||||||| || || | ||||| ||||| |||| || |||| Sbjct 19482765 ATCCAGCGTAGGGCCCAGTTAGCCTTCTTGGTGACGCAGGGAATAGTGTCAATGGCGTGG 19482824 Query 4788 AATAATTTACTTTTTTCAAATGGGTCTTGAATATAAGTGTCTATTAGTAGGCTATACATT 4847 || | | || || | ||||| || || || || | || ||||| ||||| Sbjct 19482825 AAGAGACGGGTCTTCTCTTTGGAGTCTTTTATGTAGGTTTCAAGGAGGAGGCTGTACATC 19482884 Query 4848 TCAGAATGTATATTTTCTATAGCAATCTGAAATCCGTAAAAG 4889 || || || || || || || || |||||||| ||||| ||| Sbjct 19482885 TCGGAGTGAATGTTCTCGATGGCGATCTGAAAGCCGTAGAAG 19482926 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 427045915095764