Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phaseolus_20vulgaris_20[refseq_20GCF_5F000499845.1_202013-11-29] 708 sequences; 521,076,696 total letters Query= NC_031761.1 Length=131855 Score E Sequences producing significant alignments: (Bits) Value seq3 114 1e-20 >seq3 Length=52284309 Score = 114 bits (126), Expect = 1e-20 Identities = 162/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 111099 AATGCAAATTTTTGTCAAAACGTTGACCGGCAAAACCATTACCGTGGAAACGGAACCCAG 111158 ||||||||| ||||| || || |||| || || ||||||||| |||| |||| | Sbjct 30378863 AATGCAAATATTTGTGAAGACTCTGACAGGAAAGACCATTACCTTGGAGGTGGAAAGCTC 30378922 Query 111159 CGATTCTGTTGGCCAGGTAAAACAAAAAATTGCCGACAAAGAAGGCGTTCCCGTCGATCA 111218 ||| | ||| | | || ||| ||| ||| ||||| |||||| | || ||||| Sbjct 30378923 TGATACAATTGACAATGTGAAAGCAAAGATTCAGGACAAGGAAGGCATACCACCAGATCA 30378982 Query 111219 ACAAAGGCTTATTTATGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAA 111278 ||| |||||||| | ||| || || || |||||||| || | || |||||||| Sbjct 30378983 ACAGAGGCTTATCTTTGCCGGAAAGCAGCTGGAAGATGGGCGTACCCTTGCTGATTATAA 30379042 Query 111279 TATACAAAAAGAATCTACACTACATTTAGTGTTGCGTCTGCGCGGTGG 111326 ||| || || ||||| || || || || |||||||| || || ||||| Sbjct 30379043 TATCCAGAAGGAATCCACTCTTCACTTGGTGTTGCGACTTCGTGGTGG 30379090 Score = 109 bits (120), Expect = 5e-19 Identities = 161/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 111099 AATGCAAATTTTTGTCAAAACGTTGACCGGCAAAACCATTACCGTGGAAACGGAACCCAG 111158 |||||| || ||||| || || |||| || |||||||||||| |||| ||| | Sbjct 30284683 AATGCAGATATTTGTGAAGACTCTGACAGGGAAAACCATTACCTTGGAGGTGGAGAGCTC 30284742 Query 111159 CGATTCTGTTGGCCAGGTAAAACAAAAAATTGCCGACAAAGAAGGCGTTCCCGTCGATCA 111218 ||| | ||| | || ||| ||| ||| |||||||||||| | || ||||| Sbjct 30284743 TGATACAATTGATAATGTGAAAGCAAAGATTCAGGACAAAGAAGGCATCCCACCAGATCA 30284802 Query 111219 ACAAAGGCTTATTTATGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAA 111278 || |||||||||| ||| || ||||||||||||||| | || |||| || || || Sbjct 30284803 GCAGAGGCTTATTTTTGCTGGGAAACAATTGGAAGATGGTCGCACCTTGGCAGACTACAA 30284862 Query 111279 TATACAAAAAGAATCTACACTACATTTAGTGTTGCGTCTGCGCGGTGG 111326 ||| || || ||||| || || || | || | || || |||||||| Sbjct 30284863 TATTCAGAAGGAATCCACCCTCCACCTTGTCCTTCGCCTTCGCGGTGG 30284910 Score = 107 bits (118), Expect = 2e-18 Identities = 161/229 (70%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 111100 ATGCAAATTTTTGTCAAAACGTTGACCGGCAAAACCATTACCGTGGAAACGGAACCCAGC 111159 |||||||| |||||||| || |||||||| |||||||||||| |||| ||| Sbjct 30378408 ATGCAAATCTTTGTCAAGACTTTGACCGGGAAAACCATTACCTTGGAGGTGGAGAGTTCA 30378467 Query 111160 GATTCTGTTGGCCAGGTAAAACAAAAAATTGCCGACAAAGAAGGCGTTCCCGTCGATCAA 111219 ||| | ||| | || ||| || ||| ||||| || || ||||| || || Sbjct 30378468 GATACCATTGATAATGTGAAAGCCAAGATTCAGGACAAGGAGGGTATTCCCCCAGACCAG 30378527 Query 111220 CAAAGGCTTATTTATGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAAT 111279 || |||||||| | ||| || ||||| | |||||| | ||| |||| ||||||||| Sbjct 30378528 CAGAGGCTTATCTTTGCTGGGAAACAGCTTGAAGATGGAAGAACCCTGGCGGATTATAAT 30378587 Query 111280 ATACAAAAAGAATCTACACTACATTTAGTGTTGCGTCTGCGCGGTGGCA 111328 || || || || || || | || ||||| ||| | || || ||||||| Sbjct 30378588 ATTCAGAAGGAGTCCACTTTGCACTTAGTTTTGAGGCTTCGTGGTGGCA 30378636 Score = 104 bits (114), Expect = 2e-17 Identities = 159/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 111100 ATGCAAATTTTTGTCAAAACGTTGACCGGCAAAACCATTACCGTGGAAACGGAACCCAGC 111159 ||||||||||||||||| || ||||| || ||||||||||| |||| ||| | Sbjct 30378636 ATGCAAATTTTTGTCAAGACCTTGACGGGAAAAACCATTACTTTGGAGGTTGAAAGTTCC 30378695 Query 111160 GATTCTGTTGGCCAGGTAAAACAAAAAATTGCCGACAAAGAAGGCGTTCCCGTCGATCAA 111219 ||| | ||| | ||||| ||| || |||||||| || |||| || || Sbjct 30378696 GATACCATTGATAATGTAAAGGCAAAGATACAGGACAAAGAGGGGATTCCACCAGACCAG 30378755 Query 111220 CAAAGGCTTATTTATGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAAT 111279 ||||||||||| | ||| || || || |||||||| || | || |||||||| Sbjct 30378756 CAAAGGCTTATCTTTGCTGGGAAGCAGCTGGAAGATGGGCGTACCCTTGCTGATTATAAC 30378815 Query 111280 ATACAAAAAGAATCTACACTACATTTAGTGTTGCGTCTGCGCGGTGG 111326 || || || ||||| || || ||||| |||||| | || || ||||| Sbjct 30378816 ATCCAGAAGGAATCCACTCTTCATTTGGTGTTGAGGCTTCGTGGTGG 30378862 Score = 98.7 bits (108), Expect = 8e-16 Identities = 159/229 (69%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 111099 AATGCAAATTTTTGTCAAAACGTTGACCGGCAAAACCATTACCGTGGAAACGGAACCCAG 111158 |||||| || ||||| || || |||| || || ||||||||| |||| ||| | Sbjct 30310242 AATGCAGATATTTGTGAAGACTCTGACAGGGAAGACCATTACCTTGGAGGTGGAGAGCTC 30310301 Query 111159 CGATTCTGTTGGCCAGGTAAAACAAAAAATTGCCGACAAAGAAGGCGTTCCCGTCGATCA 111218 ||| | ||| | || ||| ||| ||| ||||| || ||| |||| ||||| Sbjct 30310302 TGATACAATTGATAATGTGAAAGCAAAGATTCAGGACAAGGAGGGCATTCCACCAGATCA 30310361 Query 111219 ACAAAGGCTTATTTATGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAA 111278 || |||||||||| ||| || ||||||||||||||| | || |||| || || || Sbjct 30310362 GCAGAGGCTTATTTTTGCTGGTAAACAATTGGAAGATGGTCGCACCTTGGCAGACTACAA 30310421 Query 111279 TATACAAAAAGAATCTACACTACATTTAGTGTTGCGTCTGCGCGGTGGC 111327 || || |||||||| || || || | || | || || || |||||| Sbjct 30310422 CATTCAGAAAGAATCCACCCTCCACCTTGTCCTTCGCCTTCGTGGTGGC 30310470 Score = 98.7 bits (108), Expect = 8e-16 Identities = 159/229 (69%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 111099 AATGCAAATTTTTGTCAAAACGTTGACCGGCAAAACCATTACCGTGGAAACGGAACCCAG 111158 |||||| || ||||| || || |||| || |||||||||||| |||| ||| | Sbjct 30314981 AATGCAGATATTTGTGAAGACTCTGACAGGGAAAACCATTACCTTGGAGGTGGAGAGCTC 30315040 Query 111159 CGATTCTGTTGGCCAGGTAAAACAAAAAATTGCCGACAAAGAAGGCGTTCCCGTCGATCA 111218 ||| | ||| | || ||| ||| ||| ||||| || ||| | || ||||| Sbjct 30315041 TGATACAATTGATAATGTGAAAGCAAAGATTCAGGACAAGGAGGGCATCCCACCAGATCA 30315100 Query 111219 ACAAAGGCTTATTTATGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAA 111278 || |||||||||| ||| || ||||||||||||||| | || |||| || || || Sbjct 30315101 GCAGAGGCTTATTTTTGCTGGGAAACAATTGGAAGATGGTCGCACCTTGGCAGACTACAA 30315160 Query 111279 TATACAAAAAGAATCTACACTACATTTAGTGTTGCGTCTGCGCGGTGGC 111327 || || || ||||| || || || | || | || || ||||||||| Sbjct 30315161 CATTCAGAAGGAATCCACCCTCCACCTTGTCCTTCGCCTTCGCGGTGGC 30315209 Score = 93.3 bits (102), Expect = 4e-14 Identities = 158/229 (69%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 111099 AATGCAAATTTTTGTCAAAACGTTGACCGGCAAAACCATTACCGTGGAAACGGAACCCAG 111158 |||||| || ||||| || || |||| || || ||||||||| |||| ||| | Sbjct 30275039 AATGCAGATATTTGTGAAGACTCTGACAGGGAAGACCATTACCTTGGAGGTGGAGAGCTC 30275098 Query 111159 CGATTCTGTTGGCCAGGTAAAACAAAAAATTGCCGACAAAGAAGGCGTTCCCGTCGATCA 111218 ||| | ||| | || ||| ||| ||| ||||| || ||| |||| ||||| Sbjct 30275099 TGATACAATTGATAATGTGAAAGCAAAGATTCAAGACAAGGAGGGCATTCCACCAGATCA 30275158 Query 111219 ACAAAGGCTTATTTATGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAA 111278 || |||||||||| ||| || ||||||||||||||| | || |||| || || || Sbjct 30275159 GCAGAGGCTTATTTTTGCTGGGAAACAATTGGAAGATGGTCGCACCTTGGCAGACTACAA 30275218 Query 111279 TATACAAAAAGAATCTACACTACATTTAGTGTTGCGTCTGCGCGGTGGC 111327 || || || ||||| || || || | || | || || || |||||| Sbjct 30275219 CATTCAGAAGGAATCCACCCTCCACCTTGTCCTTCGCCTTCGTGGTGGC 30275267 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 421807560296608