Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phaseolus_20vulgaris_20[refseq_20GCF_5F000499845.1_202013-11-29] 708 sequences; 521,076,696 total letters Query= NC_033780.1 Length=144510 Score E Sequences producing significant alignments: (Bits) Value seq2 147 2e-30 seq7 114 1e-20 seq3 82.4 7e-11 >seq2 Length=49040938 Score = 147 bits (162), Expect = 2e-30 Identities = 171/229 (75%), Gaps = 4/229 (2%) Strand=Plus/Minus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || || || ||||| | || || || || ||| ||||||||| ||||| ||||||| | Sbjct 7435725 CCACCACGGAGACGGAGGACAAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGCG 7435666 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 |||||||| |||| ||||||||||| ||||||||||| || ||||| || |||| || Sbjct 7435665 AGGGTGCGGCCGTCCTCGAGCTGCTTTCCGGCGAATATGAGACGCTGCTGATCCGGCGGG 7435606 Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTT--CAACGACGACACAGTGTCGCTCGACTCCA 41813 | || |||||||||| ||| || ||| || | || | ||||| ||||||| Sbjct 7435605 ATGCCCTCCTTGTCCTGGATCTTGGCCTTGACATTGTCG--ATGGTGTCCGAAGACTCCA 7435548 Query 41814 CCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 |||| | || || ||||| ||||| || || || ||||| |||||||| Sbjct 7435547 CCTCAAGGGTGATGGTTTTCCCCGTAAGGGTTTTCACGAATATCTGCAT 7435499 Score = 138 bits (152), Expect = 1e-27 Identities = 169/229 (74%), Gaps = 4/229 (2%) Strand=Plus/Minus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || ||||| ||||| | || || || || ||| ||||||||| ||||| ||||||| | Sbjct 7451135 CCACCGCGGAGACGGAGGACAAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGCG 7451076 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 |||||||| |||| ||||||||||| |||||||| || || ||||| || |||| || Sbjct 7451075 AGGGTGCGACCGTCCTCGAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGATCCGGTGGG 7451016 Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTT--CAACGACGACACAGTGTCGCTCGACTCCA 41813 | | |||||||||| ||| || ||| || | || | ||||| ||||||| Sbjct 7451015 ATTCCCTCCTTGTCCTGGATCTTGGCCTTGACATTGTCG--ATGGTGTCTGAAGACTCCA 7450958 Query 41814 CCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 |||| | || || || || ||||| || || || ||||| |||||||| Sbjct 7450957 CCTCAAGGGTGATAGTCTTCCCCGTGAGGGTTTTCACGAATATCTGCAT 7450909 Score = 113 bits (124), Expect = 4e-20 Identities = 164/229 (72%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || || || ||||| | || || || || ||| ||||||||| || || ||||| | Sbjct 4562112 CCACCACGAAGACGCAGGACAAGGTGAAGGGTGGACTCCTTCTGGATATTGTAGTCAGCA 4562053 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 ||||| | | | || || | |||||| |||||||| ||||| | ||| ||||||| |||| Sbjct 4562052 AGGGTCCTCCCATCCTCCAACTGCTTCCCGGCGAAGATCAGCCTCTGCTGGTCCGGGGGA 4561993 Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGACACAG-TGTCGCTCGACTCCAC 41814 | | |||||||||| ||| |||| || | || | || | |||| ||| || Sbjct 4561992 ATTCCCTCCTTGTCC-TGAATTTTGGCCTTGACATTGTCAATGGTGTCAGAACTCTCAAC 4561934 Query 41815 CTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCATG 41863 ||||| || || || || || |||| ||||| || |||||||||||| Sbjct 4561933 CTCCAGAGTGATGGTCTTCCCAGTCAAGGTCTTGACAAAAATCTGCATG 4561885 >seq7 Length=51758522 Score = 114 bits (126), Expect = 1e-20 Identities = 167/232 (72%), Gaps = 8/232 (3%) Strand=Plus/Minus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || || || ||||| ||||||| || || || ||||||||| ||||||||||||| | Sbjct 4237208 CCACCACGAAGACGCAACACCAAGTGGAGAGTTGACTCCTTCTGGATGTTATAGTCGGCG 4237149 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 ||||| | | || || ||||| || || ||||| |||| | ||| ||||||| ||| Sbjct 4237148 AGGGTCCTTCCATCCTCCAGCTGTTTTCCAGCGAAGATCAACCTCTGCTGGTCCGGGGGT 4237089 Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTC---GCTCGACTC 41811 | | |||||||||| ||| || |||| ||| | | | ||||| ||| ||| Sbjct 4237088 ATTCCCTCCTTGTCCTGGATCTTGGCCTTC-ACGTTGTCGATGGTGTCAGAGCT---CTC 4237033 Query 41812 CACCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCATG 41863 |||||| | || || || || || || || ||||| || || ||||||||| Sbjct 4237032 CACCTCGAGGGTGATGGTCTTGCCGGTAAGAGTCTTCACAAAGATCTGCATG 4236981 Score = 111 bits (122), Expect = 1e-19 Identities = 160/222 (72%), Gaps = 8/222 (4%) Strand=Plus/Minus Query 41645 AGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGC 41704 ||||| | || || || || || ||||||||||||||||||||| | ||||| | | Sbjct 4237427 AGACGAAGGACAAGGTGAAGGGTAGACTCCTTCTGAATGTTATAGTCAGCAAGGGTCCTC 4237368 Query 41705 TCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCC 41764 |||| || |||||||| || ||||| |||| | ||| || |||| ||||| | |||| Sbjct 4237367 CCGTCCTCAAGCTGCTTCCCAGCGAAGATCAACCTCTGCTGATCCGGGGGAATACCCTCC 4237308 Query 41765 TTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGA---CTCCACCTCCAC 41820 || ||| ||| || |||| || | | | |||||| ||| ||||||||| | Sbjct 4237307 TTATCCTGGATCTTGGCCTTC-ACATTGTCAATAGTGTC---CGAACTCTCCACCTCAAG 4237252 Query 41821 CGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 || || || ||||| || || ||||| || || |||||||| Sbjct 4237251 AGTAATAGTCTTACCAGTGAGGGTCTTCACAAAGATCTGCAT 4237210 Score = 111 bits (122), Expect = 1e-19 Identities = 166/232 (72%), Gaps = 8/232 (3%) Strand=Plus/Minus Query 41635 GCCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGA 41694 ||| || || ||||| | || || || || ||| ||||||||||||||| || || | Sbjct 4237665 GCCCCCACGAAGACGCAGGACAAGGTGAAGAGTGGACTCCTTCTGAATGTTGTAATCAGC 4237606 Query 41695 GAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGG 41754 ||||| | | || || | |||||| || || || |||| | ||| ||||||| || Sbjct 4237605 AAGGGTTCTTCCATCCTCCAACTGCTTCCCTGCAAAGATCAACCTCTGCTGGTCCGGTGG 4237546 Query 41755 AACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTC---GCTCGACT 41810 | || |||||||||| ||| |||| || | || | | | ||||| ||| || Sbjct 4237545 GATGCCCTCCTTGTCC-TGAATTTTCGCCTTCACATTGTCGATGGTGTCAGAGCT---CT 4237490 Query 41811 CCACCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 ||||||| | || || || |||||||| || ||||| |||||||||||||| Sbjct 4237489 CCACCTCAAGGGTAATGGTCTTACCCGTAAGGGTCTTGACGAAAATCTGCAT 4237438 >seq3 Length=52284309 Score = 82.4 bits (90), Expect = 7e-11 Identities = 157/229 (69%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 41635 GCCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGA 41694 ||| || | || ||| | ||||| || || ||| |||||||||||| ||||| || | Sbjct 30309786 GCCACCTCTTAAACGAAGCACCAAGTGGAGGGTGGACTCCTTCTGAATATTATAATCTGC 30309727 Query 41695 GAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGG 41754 ||||| | | || || || || || || || || ||||| | ||| || |||| || Sbjct 30309726 AAGGGTTCTTCCATCCTCAAGTTGTTTACCAGCAAAAATCAGCCTCTGCTGATCCGGAGG 30309667 Query 41755 AACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCA 41813 | | ||| |||||| || | || |||| || | | |||||| ||| || | Sbjct 30309666 GATACCCTCTTTGTCC-TGGATCTTAGCTTTGACATTATCAATAGTGTCAGACGATTCTA 30309608 Query 41814 CCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 |||| | ||||| || || || |||| || || ||||| |||||||| Sbjct 30309607 CCTCGAGGGTTATGGTCTTGCCAGTCAAAGTTTTCACGAATATCTGCAT 30309559 Score = 82.4 bits (90), Expect = 7e-11 Identities = 144/206 (70%), Gaps = 4/206 (2%) Strand=Plus/Minus Query 41660 TGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCGTCGAGCTGC 41719 |||| ||| |||||||||||| ||||| || | ||||| | | || || ||||| Sbjct 30378610 TGCAAAGTGGACTCCTTCTGAATATTATAATCCGCCAGGGTTCTTCCATCTTCAAGCTGT 30378551 Query 41720 TTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTCCATGATTTTT 41779 || || || || || || | ||| ||||| | ||||| | |||||||||| ||| | || Sbjct 30378550 TTCCCAGCAAAGATAAGCCTCTGCTGGTCTGGGGGAATACCCTCCTTGTCC-TGAATCTT 30378492 Query 41780 TGCTTCAACGACGACACAGTGTCGCTCGA--CTCCACCTCCACCGTTATCGTTTTACCCG 41837 |||| || | | | || || | ||||||||||| || || ||||| || | Sbjct 30378491 GGCTTTCAC-ATTATCAATGGTATCTGAACTCTCCACCTCCAAGGTAATGGTTTTCCCGG 30378433 Query 41838 TCAGCGTCTTTACGAAAATCTGCATG 41863 ||| ||||| || || || |||||| Sbjct 30378432 TCAAAGTCTTGACAAAGATTTGCATG 30378407 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 462299908609600