Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Populus_20euphratica_20[refseq_20GCF_5F000495115.1_202014-08-12] 9,615 sequences; 496,032,534 total letters Query= NC_001348.1 Length=124884 Score E Sequences producing significant alignments: (Bits) Value seq73 87.8 1e-12 >seq73 Length=1038720 Score = 87.8 bits (96), Expect = 1e-12 Identities = 93/123 (76%), Gaps = 0/123 (0%) Strand=Plus/Plus Query 19001 TCAGTTTTACGTTGCAAACGGTGAATTATCCTGCCAAGTATACCAGAGATCGGGGGATAT 19060 |||||| ||||| || || || |||||||| |||||| | |||||| | || | || || Sbjct 133633 TCAGTTCTACGTAGCCAATGGAGAATTATCATGCCAAATGTACCAGCGTTCTGCTGACAT 133692 Query 19061 GGGCCTTGGGGTACCGTTCAACATTGCTGGATATGCACTTCTTACCTACATAGTAGCGCA 19120 ||||||||| || || ||||||||||| ||||| || || || | ||| | || || Sbjct 133693 GGGCCTTGGTGTGCCCTTCAACATTGCATCTTATGCTCTCCTGACATGCATCATTGCTCA 133752 Query 19121 TGT 19123 ||| Sbjct 133753 TGT 133755 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 399457184997675