Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Populus_20euphratica_20[refseq_20GCF_5F000495115.1_202014-08-12] 9,615 sequences; 496,032,534 total letters Query= NC_003038.1 Length=212482 Score E Sequences producing significant alignments: (Bits) Value seq6803 230 3e-55 >seq6803 Length=1946 Score = 230 bits (254), Expect = 3e-55 Identities = 171/195 (88%), Gaps = 5/195 (3%) Strand=Plus/Plus Query 157882 TAATATTCGTGTAACCTGGCTGTCTCAGGTCTGGTGTCAGAGTTTTCAGGTCGCTCCTGA 157941 |||||| || || ||||||||| ||||||||||||||||||||||||||||||| |||| Sbjct 748 TAATAT-CGAGTGACCTGGCTGGCTCAGGTCTGGTGTCAGAGTTTTCAGGTCGCAGCTGA 806 Query 157942 TCAATTTCAGGGCCTCTGACATGACCTAACAACTG-TTTTTAGGCAGCCGGGACCGACGG 158000 |||||||||||||||||||| ||||||||| | || ||||||||||||||||||||||| Sbjct 807 TCAATTTCAGGGCCTCTGACTTGACCTAACGAGTGCTTTTTAGGCAGCCGGGACCGACGA 866 Query 158001 CTTAACGTGTCCATCCGAAACACGGGAAAGTGGCCTGAGAAAAAT-TCCTGGTCTCACCG 158059 |||||||||||||||||||||||||| ||||||| |||| |||| || || | | | Sbjct 867 CTTAACGTGTCCATCCGAAACACGGG--AGTGGCCCGAGATAAATATCTTGCCCGGGCTG 924 Query 158060 GGGTTTGAACCCGGG 158074 || |||||||||||| Sbjct 925 GGATTTGAACCCGGG 939 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 679732694806800