Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Populus_20euphratica_20[refseq_20GCF_5F000495115.1_202014-08-12]
9,615 sequences; 496,032,534 total letters
Query= NC_005137.2
Length=131160
Score E
Sequences producing significant alignments: (Bits) Value
seq189 91.5 1e-13
>seq189
Length=529659
Score = 91.5 bits (100), Expect = 1e-13
Identities = 142/203 (70%), Gaps = 0/203 (0%)
Strand=Plus/Minus
Query 20006 TGTAGTGTAGATTCTTTTTGTATGTTGTAATCGCCCATAGTTTTAGAATCTTCCAATTGT 20065
|| || || || || ||||| || || ||||| | | || || ||| || ||||||
Sbjct 461505 TGAAGGGTGGAATCCTTTTGGATATTATAATCCGCAAGGGTCCTACCATCCTCTAATTGT 461446
Query 20066 TTGCCCGCATAAATAAGCCTCTGTTGATCGACGGGCACGCCTTCTTTGTCGGCAATTTTT 20125
|| || ||| |||| |||||||||||||| || | ||||||||||| ||| ||
Sbjct 461445 TTCCCAGCAAAAATTAGCCTCTGTTGATCCGGAGGGATACCTTCTTTGTCTTGAATCTTG 461386
Query 20126 TGTTTCACCTGGCCAACAGAATCGCCAGGTTCCGTTTCCACGGTAATGGTTTTGCCGGTC 20185
|| || | | ||| || |||| | || ||| | || ||||||||||||||
Sbjct 461385 GCCTTTACGTTGTCAATAGTATCGGAACTCTCGACTTCAAGAGTTATGGTTTTGCCGGTT 461326
Query 20186 AACGTTTTGACAAAAATTTGCAT 20208
| |||||||| || ||||||||
Sbjct 461325 AGGGTTTTGACGAAGATTTGCAT 461303
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 419538031591815
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |