Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Populus_20euphratica_20[refseq_20GCF_5F000495115.1_202014-08-12] 9,615 sequences; 496,032,534 total letters Query= NC_007151.1 Length=149622 Score E Sequences producing significant alignments: (Bits) Value seq2 95.1 1e-14 seq189 89.7 5e-13 >seq2 Length=8082884 Score = 95.1 bits (104), Expect = 1e-14 Identities = 150/215 (70%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 26766 AAAATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCA 26825 || ||||| | || || || || || || ||||| | || ||| |||| | || ||| Sbjct 7139602 AAGATGCAGATCTTCGTGAAGACCTTGACGGGAAAGACCATAACCCTCGAGGTTGAGTCA 7139543 Query 26826 AACGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGAT 26885 ||||| ||||| | |||||| |||||| ||||| || || || ||||| || Sbjct 7139542 TCAGACACAATCGACAATGTCAAAGCCAAGATTCAGGACAAGGAGGGCATCCCTCCAGAC 7139483 Query 26886 CAACAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTAT 26945 ||||| | || |||| || || ||||||||||| |||| | | | | || ||||| Sbjct 7139482 CAACAGCGTCTTATTTTCGCTGGGAAACAACTCGAGGATGGTCGCACCCTCGCTGACTAC 7139423 Query 26946 AACATTCAAAAAGAATCTACTATCCATCTGGTCCT 26980 ||||| || || || || ||| |||| |||| || Sbjct 7139422 AACATCCAGAAGGAGTCCACTCTCCACTTGGTGCT 7139388 >seq189 Length=529659 Score = 89.7 bits (98), Expect = 5e-13 Identities = 120/167 (72%), Gaps = 0/167 (0%) Strand=Plus/Plus Query 26829 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCAA 26888 || || ||||| | |||||| || || ||||||||||| || ||||| ||||| Sbjct 461135 GATACAATCGACAACGTCAAAGCCAAAATCCAAGACAAAGAAGGTATCCCTCCTGATCAG 461194 Query 26889 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTATAAC 26948 ||| | || |||| || |||||||||||||| || | | | | | ||| |||||| Sbjct 461195 CAACGCCTGATTTTCGCTGGCAAACAACTCGAGGACGGCCGTACCCTTGCCGATTATAAC 461254 Query 26949 ATTCAAAAAGAATCTACTATCCATCTGGTCCTGAGACTTAGAGGAGG 26995 || ||||| ||||| || |||| || || ||||| ||| | || || Sbjct 461255 ATCCAAAAGGAATCCACCCTCCACCTTGTTCTGAGGCTTCGCGGCGG 461301 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 478604870762800