Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Populus_20euphratica_20[refseq_20GCF_5F000495115.1_202014-08-12] 9,615 sequences; 496,032,534 total letters Query= NC_018843.1 Length=103299 Score E Sequences producing significant alignments: (Bits) Value seq6109 95.1 8e-15 >seq6109 Length=2731 Score = 95.1 bits (104), Expect = 8e-15 Identities = 178/259 (69%), Gaps = 2/259 (1%) Strand=Plus/Plus Query 79549 ACGACCAACAATCGGATGGAGATGATGGGCGCCCTGATTGCGCTGGAGCGTCTGAAGTAC 79608 ||||||||||| || |||||| |||||| |||| | || |||||||| ||| || Sbjct 856 ACGACCAACAACCGCATGGAGTTGATGGCCGCCATCATGGCGCTGGAAGCTCTTAAACGG 915 Query 79609 CCCTGCAACGTGATCCTGCATTCCGACAGCCAGTATCTAAAAAACGGCATGACGCTCTGG 79668 |||||||| || || ||| | |||||| | || | | | || || || ||| Sbjct 916 CCCTGCAAGGTCGAGCTTCATACTGACAGCAAATACGTCATGCAGGGAATCACCGAATGG 975 Query 79669 ATGAAAGGCTGGAAGCGTAACGGATGGATCACGTCTGAGAAGAAGCCAGTCAAAAACGTC 79728 ||| ||||||||| ||| ||| | || | || |||||||| || ||||||| | Sbjct 976 ATGCGCGGCTGGAAGGCCCGCGGCTGGCTGACTGCCGACAAGAAGCCGGTGAAAAACGCC 1035 Query 79729 GATCTCTGGAAACGTCTTGATGCGGC-CGCCAGCCGTCACAATGTCCGCTGGAAGTGGGT 79787 || || ||| | | || || || || |||| | || ||| | ||| ||| ||||| Sbjct 1036 GACCTATGGCAGAGGCTGGACGCCGCTCGCCTG-CGCCACGACGTCAAATGGCGCTGGGT 1094 Query 79788 TAAAGGTCATGCCGGTCAT 79806 || || |||||||| ||| Sbjct 1095 GAAGGGGCATGCCGGCCAT 1113 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 330393279048900