Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Populus_20euphratica_20[refseq_20GCF_5F000495115.1_202014-08-12] 9,615 sequences; 496,032,534 total letters Query= NC_021248.1 Length=307691 Score E Sequences producing significant alignments: (Bits) Value seq26 131 3e-25 seq137 114 3e-20 seq78 114 3e-20 seq70 113 9e-20 seq189 109 1e-18 seq461 105 1e-17 seq311 104 5e-17 seq1471 102 2e-16 seq663 100 6e-16 >seq26 Length=1968749 Score = 131 bits (144), Expect = 3e-25 Identities = 167/230 (73%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 192307 ATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCA 192366 ||||||||||| | ||||| || || || | ||| | || || ||| ||||||||| Sbjct 78470 ATACCACCTCTCAAACGTAGAACCAAGTGGAGAGTGGATTCCTTTTGGATGTTATAATCA 78411 Query 192367 GATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGT 192426 | | |||||| |||| || | ||||| ||||||||||| || ||||| ||||| || Sbjct 78410 GCAAGGGTTCGTCCATCCTCAAGCTGTTTGCCAGCAAAGATCAACCTCTGCTGATCTGGG 78351 Query 192427 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCT 192486 || || ||||| ||||| || || || ||| |||||| |||| ||| || ||| Sbjct 78350 GGGATCCCTTCCTTATCCTGGATCTTGGCTTTCACATTATCAATAGTATCCGAGCTTTCC 78291 Query 192487 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCAT 192536 || || || || ||||| || ||||| | ||||| | ||| || ||||| Sbjct 78290 ACCTCAAGGGTGATGGTCTTGCCAGTGAGAGTTTTCACAAAAATTTGCAT 78241 Score = 86.0 bits (94), Expect = 1e-11 Identities = 157/230 (68%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 192307 ATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCA 192366 || ||||||| |||||| | || ||||| | || | ||| || ||| ||||||||| Sbjct 78698 ATGCCACCTCGAAGACGGAGAACCAAATGGAGGGTGGACTCCTTCTGGATGTTATAATCA 78639 Query 192367 GATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGT 192426 | | || || |||| || | || || || ||||||||||| || || || || || Sbjct 78638 GCAAGGGTGCGGCCATCCTCGAGCTGCTTTCCGGCAAAGATTAACCTTTGCTGGTCCGGA 78579 Query 192427 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCT 192486 || || ||||| || || || || || || ||||| || | ||||| || Sbjct 78578 GGGATACCTTCCTTGTCCTGGATCTTGGCCTTGACATTGTCAATTGTGTCTGAGCTCTCA 78519 Query 192487 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCAT 192536 ||||| | || || || || ||||| | || |||| ||| |||||||| Sbjct 78518 ACTTCCAAGGTGATTGTCTTGCCAGTGAGGGTCTTAACAAAAATCTGCAT 78469 Score = 86.0 bits (94), Expect = 1e-11 Identities = 157/230 (68%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 192307 ATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCA 192366 |||||||| | || || | || || || | |||| ||| || || || |||||| Sbjct 79154 ATACCACCACGGAGGCGGAGAACCAAGTGGAGGGTAGACTCCTTCTGAATGTTGTAATCA 79095 Query 192367 GATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGT 192426 | || || || |||| || | ||| || ||||||||||| | |||||||| || || Sbjct 79094 GCTAGAGTACGCCCATCCTCAAGTTGCTTGCCAGCAAAGATGAGCCTCTGTTGGTCTGGA 79035 Query 192427 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCT 192486 || || || || |||||||| ||||| || |||||| || | || || || Sbjct 79034 GGGATGCCCTCCTTATCTTGGATTTTGGCCTTGACATTATCAATGGTGTCAGAGCTCTCC 78975 Query 192487 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCAT 192536 || || | || ||||| || || || | ||| || | ||| |||||||| Sbjct 78974 ACCTCCAAGGTGATGGTCTTCCCCGTGAGTGTCTTGACAAAGATCTGCAT 78925 Score = 84.2 bits (92), Expect = 4e-11 Identities = 144/209 (69%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 192328 ACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCAGATAATGTTCGTTCATCATCC 192387 || || || | ||||| ||| || || || || |||| | || ||| |||| ||| Sbjct 78905 ACCAAGTGAAGAGTAGACTCCTTCTGAATGTTGTAGTCAGCAAGAGTGCGTCCATCCTCC 78846 Query 192388 AATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGTGGTATTCCTTCTTTATCTTGT 192447 | || || ||||||||||| | ||||||||||| || || || || ||||| || || Sbjct 78845 AGCTGCTTGCCAGCAAAGATAAGCCTCTGTTGATCTGGGGGGATGCCCTCTTTGTCCTGG 78786 Query 192448 ATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCTACTTCTAGAGTAATGGTTTTA 192507 ||||| || |||||| || | || || ||||| || | ||||| || || Sbjct 78785 ATTTTTGCCTTGACATTATCGATGGTGTCAGAGCTCTCTACCTCCAAGGTAATAGTCTTC 78726 Query 192508 CCAGTTAATGTTTTAATAAATATCTGCAT 192536 ||||| || || || | || |||||||| Sbjct 78725 CCAGTCAAAGTCTTCACGAAAATCTGCAT 78697 >seq137 Length=652956 Score = 114 bits (126), Expect = 3e-20 Identities = 135/183 (74%), Gaps = 0/183 (0%) Strand=Plus/Minus Query 192354 GATATTATAATCAGATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCT 192413 |||||| ||||||| | || || |||| |||| || || ||||||||||| | ||| Sbjct 513282 GATATTGTAATCAGCAAGGGTACGGCCATCTTCCAGCTGCTTCCCAGCAAAGATCAGTCT 513223 Query 192414 CTGTTGATCAGGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGA 192473 ||| |||||||| || || ||||| || || || ||||| ||| ||||| |||| Sbjct 513222 CTGCTGATCAGGAGGAATCCCTTCCTTGTCCTGGATTTTGGCTTTGACATTGTCAATAGT 513163 Query 192474 ATCTGACGATTCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTG 192533 ||| ||||| || || ||||| ||||| || ||||| | ||||| | ||| ||||| Sbjct 513162 ATCACTAGATTCGACCTCAAGAGTTATGGTCTTGCCAGTCAGGGTTTTCACAAAGATCTG 513103 Query 192534 CAT 192536 ||| Sbjct 513102 CAT 513100 >seq78 Length=1009284 Score = 114 bits (126), Expect = 3e-20 Identities = 162/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 192309 ACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCAGA 192368 |||||| | ||| || | || | || || || | ||| || |||||| || || | Sbjct 200432 ACCACCGCGAAGGCGGAGGACAAGGTGCAATGTGGACTCCTTTTGGATATTGTAGTCTGC 200491 Query 192369 TAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGTGG 192428 || || ||| |||| ||||| || |||||||||||||| || ||||| || || ||||| Sbjct 200492 CAAGGTGCGTCCATCTTCCAACTGCTTACCAGCAAAGATCAACCTCTGCTGGTCTGGTGG 200551 Query 192429 TATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCTAC 192488 || || || || ||||| || || | || || ||| || | ||| || ||| || Sbjct 200552 GATCCCCTCCTTGTCTTGGATCTTTGTCTTCACGTTATCAATGGTATCGGAGCTTTCCAC 200611 Query 192489 TTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCAT 192536 || ||||||||||| || || || || || || | ||| |||||||| Sbjct 200612 CTCAAGAGTAATGGTCTTTCCTGTCAAGGTCTTGACAAAAATCTGCAT 200659 Score = 109 bits (120), Expect = 1e-18 Identities = 161/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 192309 ACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCAGA 192368 |||||| | ||| || | || | || || || | ||| || |||||| || || | Sbjct 220036 ACCACCGCGAAGGCGGAGGACAAGGTGCAATGTGGACTCCTTTTGGATATTGTAGTCTGC 220095 Query 192369 TAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGTGG 192428 | || ||| |||| ||||| || |||||||||||||| || ||||| || || ||||| Sbjct 220096 CAGGGTACGTCCATCTTCCAACTGCTTACCAGCAAAGATCAACCTCTGCTGGTCTGGTGG 220155 Query 192429 TATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCTAC 192488 || || || || ||||| || || | || || ||| || | ||| || ||| || Sbjct 220156 GATCCCCTCCTTGTCTTGGATCTTTGTCTTCACGTTATCAATGGTATCAGAGCTTTCCAC 220215 Query 192489 TTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCAT 192536 || ||||||||||| || || || || || || | ||| |||||||| Sbjct 220216 CTCAAGAGTAATGGTCTTTCCTGTCAAGGTCTTGACAAAAATCTGCAT 220263 Score = 105 bits (116), Expect = 1e-17 Identities = 133/183 (73%), Gaps = 0/183 (0%) Strand=Plus/Plus Query 192354 GATATTATAATCAGATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCT 192413 ||||||||| || | | || || | || || | |||||| ||||||||||| | || Sbjct 200933 GATATTATAGTCTGCAAGAGTGCGACCTTCCTCAAGTTGTTTCCCAGCAAAGATAAGCCT 200992 Query 192414 CTGTTGATCAGGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGA 192473 ||| ||||| ||||| ||||| || |||||||| || || | || |||||| || | Sbjct 200993 CTGCTGATCTGGTGGAATTCCCTCCTTATCTTGGATCTTTGTCTTGACATTATCAATGGT 201052 Query 192474 ATCTGACGATTCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTG 192533 ||| || ||| || || | |||||| || || || || || ||||| | ||| ||||| Sbjct 201053 ATCCGAGCTTTCCACCTCCAAAGTAATTGTCTTTCCTGTCAAGGTTTTCACAAAGATCTG 201112 Query 192534 CAT 192536 ||| Sbjct 201113 CAT 201115 Score = 105 bits (116), Expect = 1e-17 Identities = 133/183 (73%), Gaps = 0/183 (0%) Strand=Plus/Plus Query 192354 GATATTATAATCAGATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCT 192413 ||||||||| || | | || || | || || | |||||| ||||||||||| | || Sbjct 220537 GATATTATAGTCTGCAAGAGTGCGACCTTCCTCAAGTTGTTTCCCAGCAAAGATGAGCCT 220596 Query 192414 CTGTTGATCAGGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGA 192473 ||| ||||| ||||| ||||| || |||||||| || || | || |||||| || | Sbjct 220597 CTGCTGATCTGGTGGAATTCCCTCCTTATCTTGGATCTTTGTCTTGACATTATCAATGGT 220656 Query 192474 ATCTGACGATTCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTG 192533 ||| || ||| || || | |||||| || || || || || ||||| | ||| ||||| Sbjct 220657 ATCCGAGCTTTCCACCTCCAAAGTAATTGTCTTTCCCGTCAAGGTTTTCACAAAGATCTG 220716 Query 192534 CAT 192536 ||| Sbjct 220717 CAT 220719 Score = 100 bits (110), Expect = 6e-16 Identities = 160/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 192307 ATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCA 192366 || ||||| | ||||| | || ||||| | ||| | || || ||||| || || Sbjct 220262 ATCCCACCACGCAGACGGAGCACCAAATGCAGAGTTGATTCCTTCTGAATATTGTAGTCT 220321 Query 192367 GATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGT 192426 | | || || |||| |||| ||||| |||||||| || || || || || || ||| Sbjct 220322 GCAAGGGTGCGACCATCCTCCAGCTGTTTTCCAGCAAAAATCAACCTTTGCTGGTCCGGT 220381 Query 192427 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCT 192486 || || ||||| |||||||| || || |||| || ||| |||| ||| || || Sbjct 220382 GGAATCCCTTCCTTATCTTGGATCTTTGTTTTGACGTTATCAATAGTATCCGAGCTCTCC 220441 Query 192487 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCAT 192536 || || | || || ||||| ||||| | ||||| | |||||||||||| Sbjct 220442 ACCTCCAAGGTGATAGTTTTTCCAGTGAGGGTTTTCACAAATATCTGCAT 220491 Score = 91.5 bits (100), Expect = 3e-13 Identities = 158/230 (69%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 192307 ATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCA 192366 || ||||| | ||||| | || ||||| | ||||| || || |||||||| ||| Sbjct 201114 ATCCCACCACGCAGACGAAGCACCAAATGCAGAGTAGATTCCTTCTGAATATTATAGTCA 201173 Query 192367 GATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGT 192426 | | || | | |||| || | ||||| ||||||||||| | || || ||||| ||| Sbjct 201174 GCAAGGGTCCTTCCATCTTCAAGCTGTTTGCCAGCAAAGATAAGCCTTTGCTGATCCGGT 201233 Query 192427 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCT 192486 || || ||||| || || || || || | || ||||| || | || || ||| Sbjct 201234 GGGATCCCTTCCTTGTCCTGAATCTTGGTCTTCACATTGTCAATTGTGTCAGAGCTTTCC 201293 Query 192487 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCAT 192536 || || || ||||| || || ||||| | || || | ||| |||||||| Sbjct 201294 ACCTCAAGGGTAATAGTCTTGCCAGTAAGAGTCTTCACAAAGATCTGCAT 201343 >seq70 Length=1087276 Score = 113 bits (124), Expect = 9e-20 Identities = 163/230 (71%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 192307 ATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCA 192366 |||||||||||||| || | || || || | || | ||| || ||| || || ||| Sbjct 268607 ATACCACCTCTAAGTCGAAGCACCAAGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCA 268548 Query 192367 GATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGT 192426 | | ||| ||| |||| || | ||| || ||||||||||| || || || ||||| || Sbjct 268547 GCGAGTGTGCGTCCATCCTCTAGTTGCTTCCCAGCAAAGATCAACCTTTGCTGATCTGGG 268488 Query 192427 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCT 192486 || || ||||| || || || || ||| ||||||||| || | || || ||| Sbjct 268487 GGAATCCCTTCCTTGTCCTGGATCTTAGCTTTTACATTGTCGATTGTGTCAGAGCTTTCC 268428 Query 192487 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCAT 192536 || || || || ||||| || ||||| | ||||| | ||| |||||||| Sbjct 268427 ACCTCAAGGGTGATGGTCTTGCCAGTGAGAGTTTTCACAAAAATCTGCAT 268378 Score = 95.1 bits (104), Expect = 2e-14 Identities = 159/230 (69%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 192307 ATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCA 192366 |||||||| | || || | || ||||| | || | ||| || ||| || |||||| Sbjct 269289 ATACCACCACGGAGGCGAAGCACCAAATGAAGGGTGGACTCCTTCTGGATGTTGTAATCA 269230 Query 192367 GATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGT 192426 | | || || |||| || | ||| || ||||||||||| | |||||||| || || Sbjct 269229 GCGAGAGTGCGCCCATCCTCGAGTTGCTTGCCAGCAAAGATGAGCCTCTGTTGGTCTGGA 269170 Query 192427 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCT 192486 || || || ||||||||||| |||||| || |||||| || | || || || Sbjct 269169 GGGATGCCCTCTTTATCTTGGATTTTAGCCTTGACATTATCAATGGTGTCGGAGCTCTCC 269110 Query 192487 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCAT 192536 || || | || ||||| || ||||| || || || | ||| || ||||| Sbjct 269109 ACCTCCAAGGTGATGGTCTTCCCAGTCAAAGTCTTCACAAAAATTTGCAT 269060 >seq189 Length=529659 Score = 109 bits (120), Expect = 1e-18 Identities = 134/183 (73%), Gaps = 0/183 (0%) Strand=Plus/Minus Query 192354 GATATTATAATCAGATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCT 192413 |||||||||||| | | || | |||| || |||||||| |||||||| |||| || Sbjct 461485 GATATTATAATCCGCAAGGGTCCTACCATCCTCTAATTGTTTCCCAGCAAAAATTAGCCT 461426 Query 192414 CTGTTGATCAGGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGA 192473 ||||||||| || || || |||||||| ||||| || || ||||| || |||| Sbjct 461425 CTGTTGATCCGGAGGGATACCTTCTTTGTCTTGAATCTTGGCCTTTACGTTGTCAATAGT 461366 Query 192474 ATCTGACGATTCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTG 192533 ||| || || ||||| ||||| |||||||| || |||| ||||| | || || || Sbjct 461365 ATCGGAACTCTCGACTTCAAGAGTTATGGTTTTGCCGGTTAGGGTTTTGACGAAGATTTG 461306 Query 192534 CAT 192536 ||| Sbjct 461305 CAT 461303 Score = 109 bits (120), Expect = 1e-18 Identities = 161/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 192309 ACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCAGA 192368 |||||||| |||||| | || | ||| | ||||| ||| || ||||| ||||| | Sbjct 461986 ACCACCTCGAAGACGGAGCACGAGATGGAGAGTAGACTCCTTCTGAATATTGTAATCCGC 461927 Query 192369 TAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGTGG 192428 | || | |||| || ||||| || ||||||||||| | ||||| || || ||||| Sbjct 461926 AAGAGTCCTCCCATCCTCTAATTGCTTCCCAGCAAAGATAAGCCTCTGCTGGTCCGGTGG 461867 Query 192429 TATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCTAC 192488 || ||||| ||||| ||||| || ||| || || ||| | ||| || || || Sbjct 461866 AATACCTTCCTTATCCTGTATCTTGGCTTTCACGTTGTCTATCGTATCAGAGCTCTCAAC 461807 Query 192489 TTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCAT 192536 ||| ||||| ||||| || || || | || || | ||| |||||||| Sbjct 461806 TTCAAGAGTGATGGTCTTCCCTGTGAGAGTCTTGACAAAGATCTGCAT 461759 >seq461 Length=207379 Score = 105 bits (116), Expect = 1e-17 Identities = 163/229 (71%), Gaps = 4/229 (2%) Strand=Plus/Minus Query 192310 CCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCAGAT 192369 ||||| | ||| ||||| || | || | ||||| |||||| |||||||||||||| Sbjct 160865 CCACCGCGAAGGCGTAAGACAAGGTGAAGAGTAGACTCTTTCTGGATATTATAATCAGCC 160806 Query 192370 AATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGTGGT 192429 || || | | |||| ||||| || || |||||||| || | || || || || ||||| Sbjct 160805 AAAGTCCTTCCATCCTCCAACTGCTTCCCAGCAAAAATCAGCCTTTGCTGGTCCGGTGGA 160746 Query 192430 ATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCT--A 192487 || || || || || || || || || ||||| || | | | | || | ||| | Sbjct 160745 ATGCCCTCCTTGTCCTGAATCTTCGCCTTGACATT-GTCA-ATGGTGTCACTACTCTCCA 160688 Query 192488 CTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCAT 192536 | || ||||||||||| || || || ||||| || | ||| |||||||| Sbjct 160687 CCTCCAGAGTAATGGTCTTCCCCGTCAATGTCTTCACAAAAATCTGCAT 160639 Score = 95.1 bits (104), Expect = 2e-14 Identities = 133/186 (72%), Gaps = 8/186 (4%) Strand=Plus/Minus Query 192355 ATATTATAATCAGATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTC 192414 ||||||||||||| || || || |||| || | |||||| ||||| ||||| || | Sbjct 160364 ATATTATAATCAGCTAGAGTCCGACCATCCTCAAGTTGTTTCCCAGCGAAGATCAAACGT 160305 Query 192415 TGTTGATCAGGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAA 192474 |||||||| ||||| || ||||| || ||||| ||||| || || ||| | || Sbjct 160304 TGTTGATCTGGTGGGATCCCTTCCTTGTCTTGAATTTTTGCCTTAAC----GTTGTCGAT 160249 Query 192475 TCTGACG----ATTCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATAT 192530 || || ||| || || ||||||||||| || || || || || || | ||||| Sbjct 160248 GGTGTCGCTGCTTTCGACCTCGAGAGTAATGGTCTTCCCGGTCAAGGTCTTGACGAATAT 160189 Query 192531 CTGCAT 192536 |||||| Sbjct 160188 CTGCAT 160183 >seq311 Length=316158 Score = 104 bits (114), Expect = 5e-17 Identities = 117/157 (75%), Gaps = 0/157 (0%) Strand=Plus/Plus Query 192380 CATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGTGGTATTCCTTCTT 192439 |||| |||||||| || ||||||||||| || ||||| ||||||||||| || ||||| | Sbjct 207037 CATCCTCCAATTGCTTCCCAGCAAAGATAAACCTCTGCTGATCAGGTGGAATACCTTCCT 207096 Query 192440 TATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCTACTTCTAGAGTAA 192499 ||||||| || || |||| | || ||| | ||| || || || || || |||| Sbjct 207097 TATCTTGAATCTTGGTTTTCAAGTTGTCTATTGTATCAGAGCTCTCGACCTCAAGGGTAA 207156 Query 192500 TGGTTTTACCAGTTAATGTTTTAATAAATATCTGCAT 192536 | || || || |||| || || | |||||| ||||| Sbjct 207157 TTGTCTTTCCTGTTAGGGTCTTGACAAATATTTGCAT 207193 Score = 93.3 bits (102), Expect = 8e-14 Identities = 117/161 (73%), Gaps = 0/161 (0%) Strand=Plus/Plus Query 192376 CGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGTGGTATTCCT 192435 ||| |||| || | |||||| ||| ||| | || | ||||||||||| || || ||| Sbjct 215723 CGTCCATCCTCGAGTTGTTTGCCATAAAAAAATATGCGATGTTGATCAGGAGGGATGCCT 215782 Query 192436 TCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCTACTTCTAGA 192495 || || ||||| ||||| ||| || || | || | ||| | || ||||| ||| Sbjct 215783 TCCTTGTCTTGAATTTTGACTTTGACGTTGTTGATTGTATCATAACTCTCGACTTCGAGA 215842 Query 192496 GTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCAT 192536 || |||||||| || ||||| ||||| || || |||||||| Sbjct 215843 GTTATGGTTTTTCCTGTTAAGGTTTTCATGAAGATCTGCAT 215883 >seq1471 Length=47346 Score = 102 bits (112), Expect = 2e-16 Identities = 160/228 (70%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 192309 ACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCAGA 192368 |||||| | | |||| | || | ||| | | ||| ||| || | ||||||||| Sbjct 5382 ACCACCACGAGGACGGAGCACGAGATGGACAATAGACTCCTTCTGAACATTATAATCC-- 5439 Query 192369 TAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGTGG 192428 | ||| | |||| |||||||| | ||||||||||| || ||||| ||||||||||| Sbjct 5440 TCATGAGCTCCCATCCTCCAATTGCTCCCCAGCAAAGATAAACCTCTGCTGATCAGGTGG 5499 Query 192429 TATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCTAC 192488 || ||||| |||||||| || || |||| | || ||| | ||| || || || Sbjct 5500 AATACCTTCCTTATCTTGAATCTTGGTTTTCAAGTTGTCTATTGTATCAGAGCTCTCGAC 5559 Query 192489 TTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCAT 192536 || || ||||| || || || |||| || || | |||||| ||||| Sbjct 5560 CTCAAGGGTAATTGTCTTTCCTGTTAGGGTCTTGACAAATATTTGCAT 5607 >seq663 Length=136023 Score = 100 bits (110), Expect = 6e-16 Identities = 163/234 (70%), Gaps = 8/234 (3%) Strand=Plus/Plus Query 192307 ATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCA 192366 ||||| |||| ||||| | || | || | |||| |||||| |||||| || ||| Sbjct 59966 ATACCCCCTCGGAGACGGAGGACAAGGTGAAGGGTAGACTCTTTCTGGATATTGTAGTCA 60025 Query 192367 GATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGT 192426 | | || || |||| || | || || || |||||||| || | |||||||||||| Sbjct 60026 GCCAGAGTCCGGCCATCTTCGAGCTGCTTTCCTGCAAAGATCAAACGTTGTTGATCAGGT 60085 Query 192427 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGAT--- 192483 || || || || || ||||| || || || || ||| | || || || | Sbjct 60086 GGGATGCCCTCCTTGTCTTGAATCTTGGCCTTGAC----GTTGTCGATGGTGTCGCTGCT 60141 Query 192484 -TCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCAT 192536 ||||| ||||||||||||||||| || || || || || | |||||||||||| Sbjct 60142 CTCTACCTCTAGAGTAATGGTTTTCCCTGTCAAGGTCTTCACAAATATCTGCAT 60195 Score = 93.3 bits (102), Expect = 8e-14 Identities = 160/232 (69%), Gaps = 8/232 (3%) Strand=Plus/Plus Query 192309 ACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCAGA 192368 |||||| | ||||| || || | || | |||| |||||| |||||||||||| | Sbjct 59740 ACCACCACGGAGACGCAAGACAAGGTGAAGGGTAGACTCTTTCTGGATATTATAATCCGC 59799 Query 192369 TAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGTGG 192428 || |||| | |||| ||||| || || || |||||||| | | ||||||||| ||||| Sbjct 59800 CAAGGTTCTTCCATCCTCCAACTGCTTTCCGGCAAAGATCAGACGCTGTTGATCCGGTGG 59859 Query 192429 TATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGAT----T 192484 || || || || || || ||||| || || ||| | || || || | | Sbjct 59860 GATGCCCTCCTTGTCCTGGATTTTTGCCTTGAC----GTTGTCGATGGTGTCGCTGCTCT 59915 Query 192485 CTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCAT 192536 | || || || ||||| || || || || || || || | ||| |||||||| Sbjct 59916 CCACCTCCAGTGTAATCGTCTTCCCGGTCAAGGTCTTCACAAAAATCTGCAT 59967 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 984358719755250