Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Populus_20euphratica_20[refseq_20GCF_5F000495115.1_202014-08-12] 9,615 sequences; 496,032,534 total letters Query= NC_021861.1 Length=30910 Score E Sequences producing significant alignments: (Bits) Value seq2164 282 8e-72 >seq2164 Length=27727 Score = 282 bits (312), Expect = 8e-72 Identities = 177/191 (93%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 12637 GGAGGATTTTATCTGATGCCAGAAGATACTCCAGAAGAAGAATTAAGAGAAGTTGAAGTT 12696 |||||| ||||| ||||| ||||| ||||||||||| |||||||| ||||||||||| | Sbjct 27697 GGAGGACTTTATTTGATGTCAGAAAATACTCCAGAAAAAGAATTAGAAGAAGTTGAAGAT 27638 Query 12697 TATTGTGATACATGCGGAGACAATGATTCTATTATTGGTCAGTTTTCAAACTGGAATCAA 12756 |||||||| || || |||||||| |||||||||||||||||||||||||||||||| ||| Sbjct 27637 TATTGTGAGACGTGTGGAGACAACGATTCTATTATTGGTCAGTTTTCAAACTGGAAACAA 27578 Query 12757 CTTAAAAAAGAAATGACTGATGACGAAGGTTGGTGTCCATATTCGGATGAATATTTGCAA 12816 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct 27577 CTTAAAAAAGAAATGACTGATGACGAAGGTTGGTGTCCATATTCAGATGAATATTTGCAA 27518 Query 12817 TCAGTATTTGA 12827 ||||||||||| Sbjct 27517 TCAGTATTTGA 27507 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 98779120297360