Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Populus_20euphratica_20[refseq_20GCF_5F000495115.1_202014-08-12] 9,615 sequences; 496,032,534 total letters Query= NC_026268.1 Length=139132 Score E Sequences producing significant alignments: (Bits) Value seq461 86.0 6e-12 >seq461 Length=207379 Score = 86.0 bits (94), Expect = 6e-12 Identities = 155/227 (68%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 25175 ATGCAAGTGTTTGTAAAAACATTAACCGGAAAATCGATCACGATCGAAGTCGAAGCCAAC 25234 ||||| | ||||| || || |||||||||| | |||||| | || || || || | Sbjct 160411 ATGCAGATTTTTGTGAAGACCCTAACCGGAAAGACTATCACGCTAGAGGTGGAGAGCAGC 160470 Query 25235 GATACTATCGAGCAAGTAAAACAAAAAATTACCGATAAAGAGGGTATACCGCCCGATCAG 25294 || || ||||| | || || ||| ||| || || ||||| || || || || ||| Sbjct 160471 GACACCATCGACAACGTCAAGGCAAAGATTCAGGACAAGGAGGGGATCCCACCAGACCAG 160530 Query 25295 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAATGTCAGCGATTACAAT 25354 || ||| | || | | || || || || ||||||| || | | | ||||| ||| Sbjct 160531 CAGAGATTGATCTTTGCTGGGAAGCAGCTGGAAGATGGCAGGACTCTGGCGGATTATAAT 160590 Query 25355 ATTCAAAAAGAATCCACCATTCATTTAGTGTTAAGATTGAGAGGAGG 25401 |||||||| || || || ||||| | ||| |||| || | ||||| Sbjct 160591 ATTCAAAAGGAGTCAACTCTTCATCTTGTGCTAAGGCTGCGCGGAGG 160637 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 445040905216800