Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Populus_20euphratica_20[refseq_20GCF_5F000495115.1_202014-08-12]
9,615 sequences; 496,032,534 total letters
Query= NC_028636.1
Length=135952
Score E
Sequences producing significant alignments: (Bits) Value
seq663 140 3e-28
seq461 134 1e-26
seq189 125 6e-24
seq200 123 2e-23
seq93 122 8e-23
seq273 113 4e-20
seq26 111 1e-19
seq185 109 5e-19
seq78 109 5e-19
seq70 100 2e-16
seq41 100 2e-16
seq846 86.0 5e-12
>seq663
Length=136023
Score = 140 bits (154), Expect = 3e-28
Identities = 146/192 (76%), Gaps = 0/192 (0%)
Strand=Plus/Minus
Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047
|||||||| || || |||||||||||||||||| |||| || ||||| ||||| |
Sbjct 60651 ATGCAGATCTTCGTGAAAACTCTGACCGGCAAGACTATAACCCTTGAGGTGGAGAGCAGC 60592
Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107
||| | || || | |||||| || ||||||||||| || ||||| || || ||||||
Sbjct 60591 GACACCATCGACAACGTCAAAGCCAAGATTCAAGACAAGGAGGGCATCCCGCCGGATCAA 60532
Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167
|| ||||| || | |||||| ||||| | ||||| || ||| | ||||||||||
Sbjct 60531 CAACGTTTGATCTTCGCCGGAAAACAGCTAGAAGATGGTCGGACTCTGGCCGATTACAAT 60472
Query 27168 ATTCAAAAGGAG 27179
||||| ||||||
Sbjct 60471 ATTCAGAAGGAG 60460
Score = 113 bits (124), Expect = 4e-20
Identities = 161/227 (71%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047
|||||||| ||||| || || ||||||| ||| | ||||| || || ||||| |
Sbjct 59967 ATGCAGATTTTTGTGAAGACCTTGACCGGGAAGACGATTACACTGGAGGTGGAGAGCAGC 59908
Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107
||| | || || | ||||| |||||| || ||||| || ||||| ||||| ||||||
Sbjct 59907 GACACCATCGACAACGTCAAGGCAAAAATCCAGGACAAGGAGGGCATCCCACCGGATCAA 59848
Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167
|||||| | || | ||||| || || ||||| || | ||| | | ||||| ||
Sbjct 59847 CAGCGTCTGATCTTTGCCGGAAAGCAGTTGGAGGATGGAAGAACCTTGGCGGATTATAAT 59788
Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGG 27214
|| || || ||||| ||| | || | || |||||| | || |||||
Sbjct 59787 ATCCAGAAAGAGTCTACCCTTCACCTTGTCTTGCGTCTCCGTGGTGG 59741
Score = 107 bits (118), Expect = 2e-18
Identities = 139/192 (72%), Gaps = 0/192 (0%)
Strand=Plus/Minus
Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047
|||||||||||||| || || |||| || ||| | ||||| || || ||||| |
Sbjct 60423 ATGCAGATATTTGTTAAGACCTTGACAGGGAAGACCATTACCCTAGAGGTGGAGAGCAGC 60364
Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107
||| | || || | ||||| || |||||||| || || ||||| || || ||||||
Sbjct 60363 GACACCATCGACAACGTCAAGGCCAAGATTCAAGATAAGGAGGGCATCCCGCCGGATCAA 60304
Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167
|| ||||| || | |||||| ||||| | ||||| || ||| | ||||||| ||
Sbjct 60303 CAACGTTTGATCTTCGCCGGAAAACAGCTCGAAGATGGTCGGACTTTGGCCGATTATAAT 60244
Query 27168 ATTCAAAAGGAG 27179
||||| ||||||
Sbjct 60243 ATTCAGAAGGAG 60232
Score = 87.8 bits (96), Expect = 2e-12
Identities = 138/198 (70%), Gaps = 0/198 (0%)
Strand=Plus/Minus
Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047
|||||||||||||| || || |||| || || | |||||||| || || || |
Sbjct 60195 ATGCAGATATTTGTGAAGACCTTGACAGGGAAAACCATTACTCTAGAGGTAGAGAGCAGC 60136
Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107
||| | || || | ||||| || ||||||||||| || ||||| ||||| ||||||
Sbjct 60135 GACACCATCGACAACGTCAAGGCCAAGATTCAAGACAAGGAGGGCATCCCACCTGATCAA 60076
Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167
|| ||||| || | || || || || | ||||| | ||| | | || |||||
Sbjct 60075 CAACGTTTGATCTTTGCAGGAAAGCAGCTCGAAGATGGCCGGACTCTGGCTGACTACAAT 60016
Query 27168 ATTCAAAAGGAGTCGACC 27185
|| || || ||||| |||
Sbjct 60015 ATCCAGAAAGAGTCTACC 59998
>seq461
Length=207379
Score = 134 bits (148), Expect = 1e-26
Identities = 170/231 (74%), Gaps = 2/231 (1%)
Strand=Plus/Plus
Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047
|||||||| || || ||||| || ||||||||| | || ||||| || ||||| |
Sbjct 159955 ATGCAGATCTTCGTGAAAACCCTCACCGGCAAGACCATCACTCTGGAGGTGGAGAGCAGC 160014
Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107
||| | || || | ||||| || ||||||||||| |||||||| ||||| ||||||
Sbjct 160015 GACACCATCGACAACGTCAAGGCCAAGATTCAAGACAAGGAAGGCATCCCACCGGATCAA 160074
Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTT-TCCGATTACAA 27166
|||||| |||| | |||||| ||||| ||||||| | ||| | || ||||||||||
Sbjct 160075 CAGCGTCTAATCTTCGCCGGAAAACAGCTGGAAGA-TGGCCGAACTTTGGCCGATTACAA 160133
Query 27167 CATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217
||||| |||||| ||| | ||| | || | ||| | || || || ||
Sbjct 160134 TATTCAGAAGGAGAGCACCCTCCATCTTGTCCTCCGTCTCCGAGGAGGTAT 160184
Score = 129 bits (142), Expect = 5e-25
Identities = 151/204 (74%), Gaps = 0/204 (0%)
Strand=Plus/Plus
Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047
||||||||||| || || || ||||||| ||| | |||||||| || || ||| |
Sbjct 160183 ATGCAGATATTCGTCAAGACCTTGACCGGGAAGACCATTACTCTCGAGGTCGAAAGCAGC 160242
Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107
||| | || || | || || ||||||||||||||| ||||| || ||||| ||||||
Sbjct 160243 GACACCATCGACAACGTTAAGGCAAAAATTCAAGACAAGGAAGGGATCCCACCAGATCAA 160302
Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167
|| ||||| || | ||| || |||||| | || || || ||| | | ||||| ||
Sbjct 160303 CAACGTTTGATCTTCGCTGGGAAACAACTTGAGGATGGTCGGACTCTAGCTGATTATAAT 160362
Query 27168 ATTCAAAAGGAGTCGACCTTACAT 27191
||||| |||||||||||| | |||
Sbjct 160363 ATTCAGAAGGAGTCGACCCTTCAT 160386
Score = 89.7 bits (98), Expect = 4e-13
Identities = 138/197 (70%), Gaps = 0/197 (0%)
Strand=Plus/Plus
Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047
|||||||| ||||| || || || ||||| ||| |||| || || || ||||| |
Sbjct 160411 ATGCAGATTTTTGTGAAGACCCTAACCGGAAAGACTATCACGCTAGAGGTGGAGAGCAGC 160470
Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107
||| | || || | ||||| ||| ||||| ||||| || || || ||||| || ||
Sbjct 160471 GACACCATCGACAACGTCAAGGCAAAGATTCAGGACAAGGAGGGGATCCCACCAGACCAG 160530
Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167
||| | || || | || || || || ||||||| | ||| | | ||||| ||
Sbjct 160531 CAGAGATTGATCTTTGCTGGGAAGCAGCTGGAAGATGGCAGGACTCTGGCGGATTATAAT 160590
Query 27168 ATTCAAAAGGAGTCGAC 27184
|||||||||||||| ||
Sbjct 160591 ATTCAAAAGGAGTCAAC 160607
>seq189
Length=529659
Score = 125 bits (138), Expect = 6e-24
Identities = 147/199 (74%), Gaps = 0/199 (0%)
Strand=Plus/Plus
Query 26987 CATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTC 27046
||||||||| || || ||||| ||||| ||||| | || ||||||||||| || ||
Sbjct 461074 CATGCAGATCTTCGTGAAAACCCTGACAGGCAAAACCATAACTCTTGAAGTCGAGAGTTC 461133
Query 27047 CGACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCA 27106
|| | || || | |||||| ||||| |||||||||||||| || || || |||||
Sbjct 461134 TGATACAATCGACAACGTCAAAGCCAAAATCCAAGACAAAGAAGGTATCCCTCCTGATCA 461193
Query 27107 ACAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAA 27166
|| || | || | ||| ||||||||| | || ||| | ||| || ||||||| ||
Sbjct 461194 GCAACGCCTGATTTTCGCTGGCAAACAACTCGAGGACGGCCGTACCCTTGCCGATTATAA 461253
Query 27167 CATTCAAAAGGAGTCGACC 27185
||| |||||||| || |||
Sbjct 461254 CATCCAAAAGGAATCCACC 461272
Score = 118 bits (130), Expect = 9e-22
Identities = 145/198 (73%), Gaps = 0/198 (0%)
Strand=Plus/Plus
Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047
||||| || || || ||||| || |||||||| | || ||||||||||| || |||
Sbjct 461303 ATGCAAATCTTCGTCAAAACCCTAACCGGCAAAACCATAACTCTTGAAGTCGAGAGTTCC 461362
Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107
|| | ||||| | || || || ||||||||||||||||| || || || ||||||
Sbjct 461363 GATACTATTGACAACGTAAAGGCCAAGATTCAAGACAAAGAAGGTATCCCTCCGGATCAA 461422
Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167
||| | |||| | || || |||||||| || || || |||| || | ||||| ||
Sbjct 461423 CAGAGGCTAATTTTTGCTGGGAAACAATTAGAGGATGGTAGGACCCTTGCGGATTATAAT 461482
Query 27168 ATTCAAAAGGAGTCGACC 27185
|| |||||||| || |||
Sbjct 461483 ATCCAAAAGGATTCCACC 461500
Score = 105 bits (116), Expect = 6e-18
Identities = 162/231 (70%), Gaps = 0/231 (0%)
Strand=Plus/Plus
Query 26987 CATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTC 27046
|||||| || || || || ||| | || || ||| | || || ||||| || ||| ||
Sbjct 461530 CATGCAAATCTTCGTTAAGACTTTAACTGGAAAGACAATCACGCTTGAGGTTGAAAGCTC 461589
Query 27047 CGACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCA 27106
|| | ||||| | || ||| || ||||| ||||| ||||| || || || |||||
Sbjct 461590 TGATACAATTGATAACGTTAAAGCCAAGATTCAGGACAAGGAAGGGATTCCCCCGGATCA 461649
Query 27107 ACAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAA 27166
||| | | || | || || || || |||||||| | ||| || | ||||| ||
Sbjct 461650 GCAGAGGCTCATCTTTGCAGGGAAGCAGTTGGAAGAGGGGAGGACTCTTGCGGATTATAA 461709
Query 27167 CATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217
||||||||||||||| || | ||| |||| |||||||| | || || ||
Sbjct 461710 CATTCAAAAGGAGTCTACTCTGCATCTGGTACTGCGTTTGAGAGGCGGGAT 461760
Score = 95.1 bits (104), Expect = 1e-14
Identities = 157/227 (69%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047
|||||||| ||||| || ||||| || || ||| | || ||||||||||| || ||
Sbjct 461759 ATGCAGATCTTTGTCAAGACTCTCACAGGGAAGACCATCACTCTTGAAGTTGAGAGCTCT 461818
Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107
|| |||| || | || ||| || || || || || ||||| || ||||| || ||
Sbjct 461819 GATACGATAGACAACGTGAAAGCCAAGATACAGGATAAGGAAGGTATTCCACCGGACCAG 461878
Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167
||| | | || | || || || ||||| || || | ||| || | ||||||||
Sbjct 461879 CAGAGGCTTATCTTTGCTGGGAAGCAATTAGAGGATGGGAGGACTCTTGCGGATTACAAT 461938
Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGG 27214
||||| |||||||| || | ||| | || | ||| | || |||||
Sbjct 461939 ATTCAGAAGGAGTCTACTCTCCATCTCGTGCTCCGTCTTCGAGGTGG 461985
>seq200
Length=492930
Score = 123 bits (136), Expect = 2e-23
Identities = 164/228 (72%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 26987 CATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTC 27046
||||||||| || || ||||| |||| || ||| | || || || || || ||| | ||
Sbjct 457471 CATGCAGATCTTCGTGAAAACCTTGACGGGGAAGACCATAACCCTCGAGGTAGAATCTTC 457412
Query 27047 CGACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCA 27106
|| | || || | |||||| ||||| |||||||| |||||||| ||||| || ||
Sbjct 457411 AGATACAATCGACAATGTCAAAGCCAAAATCCAAGACAAGGAAGGCATCCCACCAGACCA 457352
Query 27107 ACAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAA 27166
|| ||| | || | |||||| |||||| | ||||| | || || | || |||||
Sbjct 457351 GCAACGTCTTATTTTCGCCGGGAAACAACTAGAAGATGGACGTACACTTGCAGACTACAA 457292
Query 27167 CATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGG 27214
|||||| ||||| || || | || ||||| | || ||| |||||||
Sbjct 457291 CATTCAGAAGGAATCCACACTCCACTTGGTGCTTCGCTTGAGGGGTGG 457244
>seq93
Length=881566
Score = 122 bits (134), Expect = 8e-23
Identities = 163/227 (72%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047
|||||||| || || ||||| |||| |||||| | || || || || || || | ||
Sbjct 480999 ATGCAGATCTTCGTGAAAACCTTGACGGGCAAGACAATAACCCTCGAGGTTGAGTCCTCA 480940
Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107
||| | || || | |||||| || ||||||||||| ||||| || ||||| || |||
Sbjct 480939 GACACTATCGACAATGTCAAAGCCAAGATTCAAGACAAGGAAGGTATCCCACCGGACCAA 480880
Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167
|||||| | || | ||| || ||||| | || || | || |||| || ||||||
Sbjct 480879 CAGCGTCTCATTTTCGCTGGAAAACAGCTCGAGGATGGCCGTACACTTTCTGACTACAAC 480820
Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGG 27214
|| || |||||||| || | || ||||| | || ||| |||||||
Sbjct 480819 ATCCAGAAGGAGTCCACTCTCCACTTGGTGCTTCGCTTGAGGGGTGG 480773
>seq273
Length=351239
Score = 113 bits (124), Expect = 4e-20
Identities = 161/227 (71%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047
|||||||| || || ||||| |||| || ||| | || || || || || || | ||
Sbjct 177743 ATGCAGATCTTCGTGAAAACCTTGACGGGTAAGACAATAACCCTCGAGGTTGAGTCCTCA 177684
Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107
||| |||| || | |||||| || ||||||||||| ||||| || ||||| || |||
Sbjct 177683 GACACGATCGACAATGTCAAAGCCAAGATTCAAGACAAGGAAGGTATCCCACCAGACCAA 177624
Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167
|||||| | || | ||| || ||||| | || || | || | | || ||||||
Sbjct 177623 CAGCGTCTCATTTTCGCTGGAAAACAGCTCGAGGATGGCCGCACGCTCGCTGACTACAAC 177564
Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGG 27214
|| || |||||||| || | || ||||| | || ||| |||||||
Sbjct 177563 ATCCAGAAGGAGTCCACTCTCCACTTGGTGCTTCGGTTGAGGGGTGG 177517
>seq26
Length=1968749
Score = 111 bits (122), Expect = 1e-19
Identities = 163/231 (71%), Gaps = 0/231 (0%)
Strand=Plus/Plus
Query 26987 CATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTC 27046
||||||||| || || || ||| |||| || ||| ||||||| | || || || ||
Sbjct 78696 CATGCAGATTTTCGTGAAGACTTTGACTGGGAAGACTATTACCTTGGAGGTAGAGAGCTC 78755
Query 27047 CGACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCA 27106
||| | || || | ||||| |||||| || |||||||| ||||| || || |||||
Sbjct 78756 TGACACCATCGATAATGTCAAGGCAAAAATCCAGGACAAAGAGGGCATCCCCCCAGATCA 78815
Query 27107 ACAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAA 27166
|||| | | || | || ||||| || |||| || | || || | || |||||
Sbjct 78816 ACAGAGGCTTATCTTTGCTGGCAAGCAGCTGGAGGATGGACGCACTCTTGCTGACTACAA 78875
Query 27167 CATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217
|||||| |||||||| || | || ||||| |||| ||||| || || ||
Sbjct 78876 CATTCAGAAGGAGTCTACTCTTCACTTGGTGCTGCGCTTGCGTGGAGGTAT 78926
Score = 95.1 bits (104), Expect = 1e-14
Identities = 159/230 (69%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047
|||||||| ||||| || || || || || ||| | || || | || ||||| ||
Sbjct 78925 ATGCAGATCTTTGTCAAGACACTCACGGGGAAGACCATCACCTTGGAGGTGGAGAGCTCT 78984
Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107
||| | ||||| | ||||| ||||| ||||| || || ||||| || || || |||
Sbjct 78985 GACACCATTGATAATGTCAAGGCCAAAATCCAAGATAAGGAGGGCATCCCTCCAGACCAA 79044
Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167
||| | | || | || ||||| ||| | || || | || | | |||||||||
Sbjct 79045 CAGAGGCTCATCTTTGCTGGCAAGCAACTTGAGGATGGGCGTACTCTAGCTGATTACAAC 79104
Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217
||||| |||||||| ||| | || |||||| | || | || ||||| ||
Sbjct 79105 ATTCAGAAGGAGTCTACCCTCCACTTGGTTCTCCGCCTCCGTGGTGGTAT 79154
>seq185
Length=543210
Score = 109 bits (120), Expect = 5e-19
Identities = 162/230 (70%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047
||||| || || || || ||||| || |||||| | || || ||||| |||||| ||
Sbjct 498219 ATGCAAATCTTCGTCAAGACTCTCACTGGCAAGACCATCACCCTTGAGGTGGAAAGCTCT 498278
Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107
||| | ||||| | || || || || || ||||| || || || ||||| || ||
Sbjct 498279 GACACTATTGATAATGTAAAGGCCAAGATCCAGGACAAGGAGGGGATCCCACCAGACCAG 498338
Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167
||| | | || | || ||||| ||| | || || | ||| || | || ||||||
Sbjct 498339 CAGAGGCTCATTTTTGCTGGCAAGCAACTTGAGGATGGCCGTACCCTTGCTGACTACAAC 498398
Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217
||||| |||||||| ||| | |||||||| | || ||| | ||||||||
Sbjct 498399 ATTCAGAAGGAGTCTACCCTTCATTTGGTGCTCCGATTGAGAGGTGGCAT 498448
Score = 95.1 bits (104), Expect = 1e-14
Identities = 159/230 (69%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047
|||||||| ||||| || || || || || ||| | || || | || ||||| ||
Sbjct 498903 ATGCAGATCTTTGTGAAGACCCTCACAGGAAAGACCATCACCTTGGAGGTGGAGAGCTCT 498962
Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107
|| | ||||| | || ||| || || |||||||| |||||||| || || || ||
Sbjct 498963 GATACTATTGACAATGTGAAAGCCAAGATCCAAGACAAGGAAGGCATCCCCCCAGACCAG 499022
Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167
||| | || || | || || || || | ||||| | ||| || | || ||||||
Sbjct 499023 CAGAGGTTGATTTTTGCTGGGAAGCAGCTTGAAGATGGGAGGACTCTTGCTGACTACAAC 499082
Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217
||||| |||||||| ||| | || ||||| ||||| | || || || ||
Sbjct 499083 ATTCAGAAGGAGTCAACCCTTCACTTGGTGCTGCGTCTCCGTGGAGGAAT 499132
>seq78
Length=1009284
Score = 109 bits (120), Expect = 5e-19
Identities = 162/230 (70%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047
|||||||||||||| ||||| || || || || |||| || | || ||||| ||
Sbjct 220491 ATGCAGATATTTGTGAAAACCCTCACTGGAAAAACTATCACCTTGGAGGTGGAGAGCTCG 220432
Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107
|| | ||||| | |||||| ||| || ||||| || ||||| || ||||| || ||
Sbjct 220431 GATACTATTGATAACGTCAAAACAAAGATCCAAGATAAGGAAGGGATTCCACCGGACCAG 220372
Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167
|| | || || | || || ||||| |||| || || ||| || | || |||||
Sbjct 220371 CAAAGGTTGATTTTTGCTGGAAAACAGCTGGAGGATGGTCGCACCCTTGCAGACTACAAT 220312
Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217
||||| ||||| || || | |||||||| | ||| |||| ||||| ||
Sbjct 220311 ATTCAGAAGGAATCAACTCTGCATTTGGTGCTCCGTCTGCGTGGTGGGAT 220262
Score = 105 bits (116), Expect = 6e-18
Identities = 145/203 (71%), Gaps = 0/203 (0%)
Strand=Plus/Minus
Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047
|||||||| ||||| || || |||| || ||| | ||||||||||| |||||| |||
Sbjct 200659 ATGCAGATTTTTGTCAAGACCTTGACAGGAAAGACCATTACTCTTGAGGTGGAAAGCTCC 200600
Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107
|| | ||||| | || || ||| || |||||||| || || || ||||| || ||
Sbjct 200599 GATACCATTGATAACGTGAAGACAAAGATCCAAGACAAGGAGGGGATCCCACCAGACCAG 200540
Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167
||| | || || | || || || || |||||||| | ||| | | || |||||
Sbjct 200539 CAGAGGTTGATCTTTGCTGGTAAGCAGTTGGAAGATGGACGCACCTTGGCAGACTACAAT 200480
Query 27168 ATTCAAAAGGAGTCGACCTTACA 27190
|| ||||||||||| || || ||
Sbjct 200479 ATCCAAAAGGAGTCCACATTGCA 200457
Score = 100 bits (110), Expect = 2e-16
Identities = 144/203 (71%), Gaps = 0/203 (0%)
Strand=Plus/Minus
Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047
|||||||| ||||| || || |||| || ||| | ||||||||||| |||||| ||
Sbjct 220263 ATGCAGATTTTTGTCAAGACCTTGACAGGAAAGACCATTACTCTTGAGGTGGAAAGCTCT 220204
Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107
|| | ||||| | || || ||| || |||||||| || || || ||||| || ||
Sbjct 220203 GATACCATTGATAACGTGAAGACAAAGATCCAAGACAAGGAGGGGATCCCACCAGACCAG 220144
Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167
||| | || || | || || || || |||||||| | ||| | | || |||||
Sbjct 220143 CAGAGGTTGATCTTTGCTGGTAAGCAGTTGGAAGATGGACGTACCCTGGCAGACTACAAT 220084
Query 27168 ATTCAAAAGGAGTCGACCTTACA 27190
|| ||||||||||| || || ||
Sbjct 220083 ATCCAAAAGGAGTCCACATTGCA 220061
>seq70
Length=1087276
Score = 100 bits (110), Expect = 2e-16
Identities = 160/230 (70%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047
||||| || ||||| || ||| |||| || ||| | || || | || ||||| |||
Sbjct 269060 ATGCAAATTTTTGTGAAGACTTTGACTGGGAAGACCATCACCTTGGAGGTGGAGAGCTCC 269119
Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107
||| | ||||| | ||||| ||||| ||||| ||||| ||||| || || || |||
Sbjct 269120 GACACCATTGATAATGTCAAGGCTAAAATCCAAGATAAAGAGGGCATCCCTCCAGACCAA 269179
Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167
||| | | || | || ||||| ||| | || || | || | | |||||||||
Sbjct 269180 CAGAGGCTCATCTTTGCTGGCAAGCAACTCGAGGATGGGCGCACTCTCGCTGATTACAAC 269239
Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217
|| || |||||||| ||| | |||||||| | || | || ||||| ||
Sbjct 269240 ATCCAGAAGGAGTCCACCCTTCATTTGGTGCTTCGCCTCCGTGGTGGTAT 269289
Score = 82.4 bits (90), Expect = 7e-11
Identities = 147/215 (68%), Gaps = 0/215 (0%)
Strand=Plus/Plus
Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047
|||||||| ||||| || || || || || ||| | || || || ||||| || |
Sbjct 269288 ATGCAGATCTTTGTCAAGACCCTCACTGGGAAGACCATAACCCTGGAAGTCGAGAGCTTG 269347
Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107
||| | ||||| | || || ||||| ||||| || || || || ||||| || ||
Sbjct 269348 GACACCATTGACAATGTGAAGGCCAAAATCCAAGATAAGGAGGGGATCCCACCTGACCAG 269407
Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167
|| | || || | ||| || || || | ||||| | |||| | | |||||||||
Sbjct 269408 CAAAGGTTGATCTTCGCTGGAAAGCAGCTTGAAGATGGAAGGACCTTAGCTGATTACAAC 269467
Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCG 27202
||||| ||||| || || | || ||||| ||||
Sbjct 269468 ATTCAGAAGGAATCCACTCTTCACTTGGTGCTGCG 269502
>seq41
Length=1573182
Score = 100 bits (110), Expect = 2e-16
Identities = 160/230 (70%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047
||||| || || || || ||||| || |||||| | || || ||||| |||||| ||
Sbjct 840883 ATGCAAATCTTCGTCAAGACTCTTACTGGCAAGACCATCACCCTTGAGGTGGAAAGCTCA 840824
Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107
||| | ||||| | || || || || || ||||| || || || ||||| || ||
Sbjct 840823 GACACTATTGATAATGTTAAGGCCAAGATCCAGGACAAGGAGGGAATCCCACCAGACCAG 840764
Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167
||| | | || | || ||||| || | || || | ||| || | |||||||||
Sbjct 840763 CAGAGGCTGATTTTTGCTGGCAAGCAGCTTGAGGATGGCCGCACCCTTGCTGATTACAAC 840704
Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217
|| || |||||||| ||| | || ||||| | |||||| | ||||| ||
Sbjct 840703 ATCCAGAAGGAGTCCACCCTCCACTTGGTGCTTCGTTTGAGAGGTGGTAT 840654
Score = 91.5 bits (100), Expect = 1e-13
Identities = 158/230 (69%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047
||||| || ||||| || || || || || ||| | || || | || ||||| ||
Sbjct 840655 ATGCAAATCTTTGTTAAGACCCTTACTGGAAAGACCATCACCTTGGAGGTGGAGAGTTCT 840596
Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107
|| | || || | ||||| || || || ||||| |||||||| || || || ||
Sbjct 840595 GATACCATCGACAATGTCAAGGCTAAGATCCAGGACAAGGAAGGCATTCCCCCAGACCAG 840536
Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167
||| | || || | |||||||| || |||| || | ||| || | |||||||||
Sbjct 840535 CAGAGGTTGATCTTTGCCGGCAAGCAGCTGGAGGATGGCCGCACCCTTGCTGATTACAAC 840476
Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217
|| || |||||||| ||| | || ||||| | ||| | || ||||| ||
Sbjct 840475 ATCCAGAAGGAGTCCACCCTCCACTTGGTGCTTCGTCTACGTGGTGGTAT 840426
>seq846
Length=101360
Score = 86.0 bits (94), Expect = 5e-12
Identities = 94/125 (75%), Gaps = 0/125 (0%)
Strand=Plus/Plus
Query 27076 TTCAAGACAAAGAAGGCATACCACCCGATCAACAGCGTTTAATATACGCCGGCAAACAAT 27135
|||| ||||| |||||||| || || || || ||| | || || | ||| || || ||||
Sbjct 82138 TTCAGGACAAGGAAGGCATCCCTCCAGACCAGCAGAGGTTGATTTTCGCTGGTAAGCAAT 82197
Query 27136 TGGAAGACAGTTCGACCGTTTCCGATTACAACATTCAAAAGGAGTCGACCTTACATTTGG 27195
||||||| | ||| || | ||||| |||||||| |||||||| || | || ||||
Sbjct 82198 TGGAAGATGGCCGGACTCTTGCTGATTATAACATTCAGAAGGAGTCAACACTTCACTTGG 82257
Query 27196 TTTTG 27200
|||||
Sbjct 82258 TTTTG 82262
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 434866128244800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |