Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Populus_20euphratica_20[refseq_20GCF_5F000495115.1_202014-08-12] 9,615 sequences; 496,032,534 total letters Query= NC_028879.1 Length=43225 Score E Sequences producing significant alignments: (Bits) Value seq1961 82.4 2e-11 >seq1961 Length=32166 Score = 82.4 bits (90), Expect = 2e-11 Identities = 66/79 (84%), Gaps = 2/79 (3%) Strand=Plus/Plus Query 31247 CCGTTTTTGGCTGCGCCGGTAGGATTCGAACCTACGAATGCCGGAATCAAAATCCGGTGC 31306 ||| | ||||| | | |||||||||||||||||||||||||| | ||||||| | ||||| Sbjct 20977 CCGCTATTGGCAGGGGCGGTAGGATTCGAACCTACGAATGCCAGGATCAAAACCTGGTGC 21036 Query 31307 CTT--ACCGCTTGGCGACG 31323 ||| || |||||||||| Sbjct 21037 CTTGGGCCTCTTGGCGACG 21055 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 138182620765810