Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Populus_20trichocarpa_20[refseq_20GCF_5F000002775.3_202013-10-18] 2,514 sequences; 417,286,671 total letters Query= NC_001348.1 Length=124884 Score E Sequences producing significant alignments: (Bits) Value seq4 87.8 1e-12 >seq4 Length=23188140 Score = 87.8 bits (96), Expect = 1e-12 Identities = 93/123 (76%), Gaps = 0/123 (0%) Strand=Plus/Minus Query 19001 TCAGTTTTACGTTGCAAACGGTGAATTATCCTGCCAAGTATACCAGAGATCGGGGGATAT 19060 |||||| ||||| || || || |||||||| |||||| | |||||| | || | || || Sbjct 16926273 TCAGTTCTACGTAGCCAATGGAGAATTATCATGCCAAATGTACCAGCGTTCTGCTGACAT 16926214 Query 19061 GGGCCTTGGGGTACCGTTCAACATTGCTGGATATGCACTTCTTACCTACATAGTAGCGCA 19120 ||||||||| || || ||||||||||| ||||| || || || | ||| | || || Sbjct 16926213 GGGCCTTGGTGTGCCCTTCAACATTGCATCGTATGCTCTCCTGACATGCATCATTGCTCA 16926154 Query 19121 TGT 19123 ||| Sbjct 16926153 TGT 16926151 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 399491759447130