Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Populus_20trichocarpa_20[refseq_20GCF_5F000002775.3_202013-10-18]
2,514 sequences; 417,286,671 total letters
Query= NC_001973.1
Length=161046
Score E
Sequences producing significant alignments: (Bits) Value
seq12 136 4e-27
seq15 131 2e-25
seq14 131 2e-25
seq2 127 2e-24
seq7 122 9e-23
seq17 120 3e-22
seq11 118 1e-21
seq1 118 1e-21
seq6 105 7e-18
seq4 100 3e-16
>seq12
Length=14929429
Score = 136 bits (150), Expect = 4e-27
Identities = 168/230 (73%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 40687 AAAATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCC 40746
|| ||||| || ||||| ||||| | |||||||| || || ||| |||| || ||| ||
Sbjct 11925966 AAGATGCAGATCTTCGTGAAAACCTTGACGGGCAAGACAATAACCCTCGAGGTAGAATCC 11925907
Query 40747 ACCGACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGAC 40806
| || | | | | |||| | || |||| ||||| || || ||||| | |||
Sbjct 11925906 TCAGATACAATCGACAATGTCAAAGCCAAGATTCAAGACAAGGAAGGTATCCCACCAGAC 11925847
Query 40807 CAGCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTAC 40866
|| || || ||||| | ||| || |||||||| || |||| ||||| ||| ||||||
Sbjct 11925846 CAACAGCGTCTCATTTTCGCTGGAAAACAGCTCGAGGACGGCCGCACACTCGCTGACTAC 11925787
Query 40867 AACATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGG 40916
||||||||||||||| |||| || || | ||| | ||||||||||| ||
Sbjct 11925786 AACATCCAGAAGGAGTCCACTCTCCACTTGGTGCTTCGCTTGAGGGGTGG 11925737
>seq15
Length=15134944
Score = 131 bits (144), Expect = 2e-25
Identities = 167/230 (73%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 40687 AAAATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCC 40746
|| ||||| || ||||| ||||| | |||||||| || || ||| |||| || || ||
Sbjct 12612482 AAGATGCAGATCTTCGTGAAAACCTTGACGGGCAAGACAATAACCCTCGAGGTTGAGTCC 12612423
Query 40747 ACCGACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGAC 40806
| |||| || | | |||| | || |||| ||||| || || ||||| ||||
Sbjct 12612422 TCAGACACTGTTGACAATGTCAAAGCCAAGATTCAAGACAAGGAAGGTATCCCACCGGAT 12612363
Query 40807 CAGCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTAC 40866
|| || || ||||| | ||| || |||||||| || |||| || || || ||||||
Sbjct 12612362 CAACAGCGTCTCATTTTCGCTGGAAAACAGCTCGAGGACGGCCGTACACTTGCTGACTAC 12612303
Query 40867 AACATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGG 40916
||||||||||||||| |||| || || | ||| | ||||||||||| ||
Sbjct 12612302 AACATCCAGAAGGAGTCCACTCTCCACTTGGTGCTTCGCTTGAGGGGTGG 12612253
>seq14
Length=17716633
Score = 131 bits (144), Expect = 2e-25
Identities = 167/230 (73%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 40687 AAAATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCC 40746
|| ||||| || ||||| || || | ||||| || ||||| ||| |||| || || |
Sbjct 8229135 AAGATGCAGATCTTCGTGAAGACCTTGACGGGAAAGACCATAACCCTCGAGGTTGAGTCA 8229076
Query 40747 ACCGACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGAC 40806
| |||| | | | |||| | || |||| ||||| ||||||||||| | |||
Sbjct 8229075 TCAGACACAATCGACAATGTCAAAGCCAAGATTCAGGACAAGGAGGGCATCCCTCCAGAC 8229016
Query 40807 CAGCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTAC 40866
|| || || ||||| | ||| || ||||| || || |||| ||||||||| ||||||
Sbjct 8229015 CAACAGCGTCTCATTTTCGCTGGGAAACAACTCGAGGACGGTCGCACCCTCGCTGACTAC 8228956
Query 40867 AACATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGG 40916
||||||||||||||| |||| || || | ||| | ||| ||||||| ||
Sbjct 8228955 AACATCCAGAAGGAGTCCACTCTCCACTTGGTGCTTCGCCTGAGGGGTGG 8228906
>seq2
Length=23562801
Score = 127 bits (140), Expect = 2e-24
Identities = 166/230 (72%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 40687 AAAATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCC 40746
|| ||||| || ||||| ||||| | ||||| || || || ||| |||| || || ||
Sbjct 14983050 AAGATGCAGATCTTCGTGAAAACCTTGACGGGTAAGACAATAACCCTCGAGGTTGAGTCC 14982991
Query 40747 ACCGACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGAC 40806
| |||| | | | |||| | || |||| ||||| ||||||||||| | |||
Sbjct 14982990 TCAGACACGATCGACAATGTCAAAGCCAAGATTCAAGACAAGGAGGGCATCCCACCAGAC 14982931
Query 40807 CAGCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTAC 40866
|| || || ||||| | ||| || |||||||| || || | ||||| ||| ||||||
Sbjct 14982930 CAACAGCGTCTCATTTTCGCTGGAAAACAGCTCGAGGATGGCCGCACGCTCGCTGACTAC 14982871
Query 40867 AACATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGG 40916
||||||||||||||| |||| || || | || | || |||||||| ||
Sbjct 14982870 AACATCCAGAAGGAGTCCACTCTCCACTTGGTTCTTCGGTTGAGGGGTGG 14982821
>seq7
Length=15101417
Score = 122 bits (134), Expect = 9e-23
Identities = 163/227 (72%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749
||||| || ||||| || || | || || || ||||| ||| | || || || | |
Sbjct 1458664 ATGCAGATTTTCGTGAAGACTTTGACTGGGAAGACCATTACCTTGGAGGTAGAGAGCTCT 1458605
Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809
|||| | | | | |||||| |||||| | |||||||||||||||||| | || ||
Sbjct 1458604 GACACCATCGATAATGTCAAGGCAAAAATCCAGGACAAAGAGGGCATCCCCCCAGATCAA 1458545
Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869
|| | || |||| || ||||| ||||| || || | |||||| || |||||||||
Sbjct 1458544 CAGAGGCTTATCTTTGCTGGCAAGCAGCTAGAGGATGGGCGCACTCTGGCTGACTACAAC 1458485
Query 40870 ATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGG 40916
|||||||||||| | || || || | ||| |||||||| | || ||
Sbjct 1458484 ATCCAGAAGGAGTCTACTCTTCACTTGGTGCTGCGCTTGCGTGGAGG 1458438
Score = 96.9 bits (106), Expect = 4e-15
Identities = 143/203 (70%), Gaps = 0/203 (0%)
Strand=Plus/Minus
Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749
||||| || || || || || ||||| || || ||||||||| | || || || | |
Sbjct 1458436 ATGCAGATCTTTGTCAAGACACTCACCGGGAAGACCATCACCTTGGAGGTGGAGAGCTCT 1458377
Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809
|||| | | | | | |||| ||||| | || || ||||||||||| | |||||
Sbjct 1458376 GACACCATTGATAATGTGAAGGCTAAAATCCAAGATAAGGAGGGCATCCCTCCAGACCAA 1458317
Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869
|| ||||||||| || || || || || || || | |||||| || || ||||||
Sbjct 1458316 CAGAGACTCATCTTTGCTGGGAAGCAACTTGAGGATGGGCGCACTCTTGCTGATTACAAC 1458257
Query 40870 ATCCAGAAGGAGGCCACGCTGCA 40892
|| ||||||||| |||| || ||
Sbjct 1458256 ATTCAGAAGGAGTCCACCCTCCA 1458234
Score = 95.1 bits (104), Expect = 1e-14
Identities = 147/210 (70%), Gaps = 0/210 (0%)
Strand=Plus/Minus
Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749
||||| || || || || || ||||| ||||| || |||||| | || || || | |
Sbjct 1458892 ATGCAGATTTTTGTTAAGACCCTCACTGGCAAGACAATCACCTTGGAAGTTGAGAGCTCA 1458833
Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809
|||| | | | |||||| || || | ||||| || || ||||| ||||||||
Sbjct 1458832 GACACAATTGACAATGTCAAGGCCAAGATCCAGGACAAGGAAGGTATCCCTCCGGACCAG 1458773
Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869
||| | | |||| || || || ||||| || || | |||||||| || || |||
Sbjct 1458772 CAAAGGTTGATCTTTGCCGGAAAGCAGCTCGAGGATGGCCGCACCCTTGCTGATTATAAC 1458713
Query 40870 ATCCAGAAGGAGGCCACGCTGCATCTAGTG 40899
|||||||||||| |||| || ||| | |||
Sbjct 1458712 ATCCAGAAGGAGTCCACCCTCCATTTGGTG 1458683
>seq17
Length=14661173
Score = 120 bits (132), Expect = 3e-22
Identities = 156/216 (72%), Gaps = 0/216 (0%)
Strand=Plus/Minus
Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749
|||||||| || || || || | || || || ||||||||| | || || || | ||
Sbjct 4943049 ATGCAAATTTTTGTGAAGACTTTGACTGGGAAGACCATCACCTTGGAGGTGGAGAGCTCC 4942990
Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809
|||| | | | | |||||| ||||| | || |||||||||||||| | |||||
Sbjct 4942989 GACACCATTGATAATGTCAAGGCTAAAATCCAAGATAAAGAGGGCATCCCTCCAGACCAA 4942930
Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869
|| | ||||||| || ||||| || || || || | |||||| ||| || ||||||
Sbjct 4942929 CAGAGGCTCATCTTTGCTGGCAAGCAACTTGAGGATGGGCGCACTCTCGCTGATTACAAC 4942870
Query 40870 ATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGC 40905
|||||||||||| |||| || ||| | ||| | |||
Sbjct 4942869 ATCCAGAAGGAGTCCACCCTTCATTTGGTGCTTCGC 4942834
Score = 96.9 bits (106), Expect = 4e-15
Identities = 151/216 (70%), Gaps = 0/216 (0%)
Strand=Plus/Minus
Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749
||||| || || || || || | || || || ||||||||| | || || || | ||
Sbjct 4943277 ATGCAGATCTTTGTCAAGACTTTGACTGGGAAGACCATCACCTTGGAGGTGGAGAGCTCC 4943218
Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809
|||| | | | | |||||| ||||| | || || ||||||||||| | |||||
Sbjct 4943217 GACACCATTGATAATGTCAAGGCCAAAATCCAGGATAAGGAGGGCATCCCTCCAGACCAA 4943158
Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869
|| | ||||||| || ||||| ||||| || || | || || || |||||||||
Sbjct 4943157 CAGAGGCTCATCTTTGCTGGCAAGCAGCTCGAGGATGGACGTACTCTAGCTGACTACAAC 4943098
Query 40870 ATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGC 40905
||||||||||| |||| || || | ||| | |||
Sbjct 4943097 ATCCAGAAGGAATCCACCCTTCACTTGGTGCTCCGC 4943062
Score = 96.9 bits (106), Expect = 4e-15
Identities = 143/203 (70%), Gaps = 0/203 (0%)
Strand=Plus/Minus
Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749
||||| || || || ||||| ||||| ||||| ||||||||| |||| || ||| | |
Sbjct 4943505 ATGCAGATTTTTGTGAAAACTCTCACTGGCAAGACCATCACCCTCGAGGTGGAAAGCTCT 4943446
Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809
|||| | | | | || | || || | ||||| || || || ||| | || |||
Sbjct 4943445 GACACAATCGACAATGTAAAAGCTAAGATCCAGGACAAGGAAGGGATTCCCCCAGATCAG 4943386
Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869
||| | | |||| || || || || || || || | ||||| ||| |||||||||
Sbjct 4943385 CAAAGGTTGATCTTTGCTGGGAAGCAACTAGAGGATGGACGCACACTCGCTGACTACAAC 4943326
Query 40870 ATCCAGAAGGAGGCCACGCTGCA 40892
|||||||||||| |||| || ||
Sbjct 4943325 ATCCAGAAGGAGTCCACCCTCCA 4943303
Score = 93.3 bits (102), Expect = 4e-14
Identities = 147/211 (70%), Gaps = 0/211 (0%)
Strand=Plus/Minus
Query 40689 AATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCAC 40748
||||||||| || || || || || || || |||||||||||| | || || || |
Sbjct 4942594 AATGCAAATCTTTGTCAAGACCCTGACTGGAAAAACCATCACCCTGGAGGTTGAGAGTTC 4942535
Query 40749 CGACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808
|||| | | | | | |||| ||||| | ||||| ||||| || || | |||||
Sbjct 4942534 AGACACCATTGATAATGTGAAGGCTAAAATCCAGGACAAGGAGGGGATTCCACCAGACCA 4942475
Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868
||| |||| |||| || || || ||||| || || | | ||||| || |||||
Sbjct 4942474 GCAGAGACTGATCTTTGCTGGGAAGCAGCTTGAAGATGGAAGGACCCTGGCAGATTACAA 4942415
Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGTG 40899
||| ||||||||| |||| || || || |||
Sbjct 4942414 CATACAGAAGGAGTCCACTCTACACCTTGTG 4942384
Score = 89.7 bits (98), Expect = 5e-13
Identities = 148/211 (70%), Gaps = 2/211 (1%)
Strand=Plus/Plus
Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749
||||| || || || ||||| ||||| || ||||| |||||| | || || || | |
Sbjct 1747665 ATGCAGATTTTTGTGAAAACCCTCACTGGAAAAACTATCACCTTGGAGGTGGAGAGCTCG 1747724
Query 40750 GACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808
|| | | | |||| ||||| ||| || | || || || || ||||| |||||||
Sbjct 1747725 GATACTATTGATAACG-TCAAGACAAAGATCCAAGATAAGGAAGGGATCCCACCGGACCA 1747783
Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868
|||| | | || | || || ||||||||||| || | |||||||| ||||||||
Sbjct 1747784 GCAAAGGTTGATTTTTGCTGGAAAACAGCTGGAGGATGGTCGCACCCTTGCAGACTACAA 1747843
Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGTG 40899
|| ||||| || | || |||||| | |||
Sbjct 1747844 TATTCAGAAAGAATCGACTCTGCATTTGGTG 1747874
>seq11
Length=18885544
Score = 118 bits (130), Expect = 1e-21
Identities = 163/228 (71%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749
|||||||| ||||| || || || || ||||| ||||||||| | || || ||| | |
Sbjct 16429556 ATGCAAATCTTCGTCAAGACTCTTACTGGCAAGACCATCACCCTTGAGGTGGAAAGCTCA 16429615
Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809
|||| | | | | |||| || || | ||||| ||||| ||||| | ||||||
Sbjct 16429616 GACACTATTGATAATGTTAAGGCCAAGATCCAGGACAAGGAGGGAATCCCACCAGACCAG 16429675
Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869
|| | || || | ||| ||||| ||||| || || | |||||||| || ||||||
Sbjct 16429676 CAGAGGCTGATTTTCGCCGGCAAGCAGCTTGAGGATGGCCGCACCCTTGCTGATTACAAC 16429735
Query 40870 ATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGGC 40917
|||||||||||| |||| || || | ||| | || ||||| || |||
Sbjct 16429736 ATCCAGAAGGAGTCCACCCTCCACTTGGTGCTCCGTTTGAGAGGTGGC 16429783
Score = 96.9 bits (106), Expect = 4e-15
Identities = 143/203 (70%), Gaps = 0/203 (0%)
Strand=Plus/Plus
Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749
||||| || || || || || ||||| || || |||||||| | || || || | |
Sbjct 16430012 ATGCAGATCTTTGTGAAGACCCTCACTGGAAAGACCATCACTTTGGAGGTTGAGAGCTCT 16430071
Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809
|| | | | | | |||||| || || | ||||| || ||||| ||| | ||||||
Sbjct 16430072 GATACCATTGATAATGTCAAGGCCAAGATACAGGACAAGGAAGGCATTCCCCCAGACCAG 16430131
Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869
|| | | |||| || ||||| ||||| || || | |||||||| |||||||||
Sbjct 16430132 CAGAGGTTGATCTTTGCCGGCAAGCAGCTCGAGGATGGCCGCACCCTTGCTGACTACAAC 16430191
Query 40870 ATCCAGAAGGAGGCCACGCTGCA 40892
|||||||||||| |||| || ||
Sbjct 16430192 ATCCAGAAGGAGTCCACCCTCCA 16430214
Score = 91.5 bits (100), Expect = 2e-13
Identities = 146/210 (70%), Gaps = 0/210 (0%)
Strand=Plus/Plus
Query 40689 AATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCAC 40748
||||||||| || || || || | || || || ||||||||| | || || || | |
Sbjct 16430467 AATGCAAATCTTTGTTAAGACTTTGACTGGAAAGACCATCACCCTGGAGGTGGAGAGCTC 16430526
Query 40749 CGACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808
|||| | | | | |||||| || || | ||||| || || || ||| | |||||
Sbjct 16430527 AGACACCATTGACAATGTCAAGGCTAAGATCCAGGACAAGGAAGGAATACCCCCTGACCA 16430586
Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868
||| | | |||| || || || ||| |||| || | |||||||| ||||||||
Sbjct 16430587 ACAAAGGTTGATCTTTGCCGGAAAGCAGTTGGAAGATGGACGCACCCTAGCAGACTACAA 16430646
Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGT 40898
|||||||||||| |||| || || || ||
Sbjct 16430647 TATCCAGAAGGAGTCCACCCTTCACCTTGT 16430676
Score = 87.8 bits (96), Expect = 2e-12
Identities = 141/203 (69%), Gaps = 0/203 (0%)
Strand=Plus/Plus
Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749
|||||||| || || || || || || || || ||||||||| | || || || |
Sbjct 16429784 ATGCAAATCTTTGTTAAGACCCTTACTGGAAAGACCATCACCTTGGAGGTGGAGAGTTCT 16429843
Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809
|| | | | | | |||||| || || | ||||| || ||||| ||| | ||||||
Sbjct 16429844 GATACCATCGACAATGTCAAGGCTAAGATCCAGGACAAGGAAGGCATTCCCCCAGACCAG 16429903
Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869
|| | | |||| || || || ||||| || || | |||||||| || ||||||
Sbjct 16429904 CAGAGGTTGATCTTTGCCGGTAAGCAGCTTGAGGATGGCCGCACCCTTGCTGATTACAAC 16429963
Query 40870 ATCCAGAAGGAGGCCACGCTGCA 40892
|||||||||||| |||| || ||
Sbjct 16429964 ATCCAGAAGGAGTCCACCCTCCA 16429986
>seq1
Length=48367220
Score = 118 bits (130), Expect = 1e-21
Identities = 163/228 (71%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749
|||||||| ||||| || || ||||| ||||| ||||||||| | || || ||| | |
Sbjct 44859905 ATGCAAATCTTCGTCAAGACTCTCACTGGCAAGACCATCACCCTTGAGGTGGAAAGCTCT 44859964
Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809
|||| | | | | |||| || || | ||||| ||||| ||||| | ||||||
Sbjct 44859965 GACACTATTGATAATGTAAAGGCCAAGATCCAGGACAAGGAGGGGATCCCACCAGACCAG 44860024
Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869
|| | || || | || ||||| ||||| || || | || ||||| ||||||||||
Sbjct 44860025 CAGAGGCTTATTTTTGCTGGCAAGCAGCTTGAGGATGGCCGTACCCTTGCCGACTACAAC 44860084
Query 40870 ATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGGC 40917
|| ||||||||| | || || ||| | ||| | || ||||| || |||
Sbjct 44860085 ATTCAGAAGGAGTCTACCCTTCATTTGGTGCTCCGATTGAGAGGTGGC 44860132
Score = 113 bits (124), Expect = 5e-20
Identities = 161/227 (71%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749
||||| || ||||| || || | ||||| || ||||| ||| |||| |||||| | |
Sbjct 4826616 ATGCAGATCTTCGTGAAGACCTTGACGGGGAAGACCATAACCCTCGAGGTCGAATCTTCA 4826557
Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809
|| | | | | |||| | ||||| | ||||| || |||||||| | ||||||
Sbjct 4826556 GATACAATCGACAATGTCAAAGCCAAAATCCAAGACAAGGAAGGCATCCCACCAGACCAG 4826497
Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869
||||| || || | ||| || ||||| || || || | || || || |||||||||
Sbjct 4826496 CAACGTCTTATTTTCGCCGGAAAACAACTAGAAGATGGACGTACACTTGCAGACTACAAC 4826437
Query 40870 ATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGG 40916
|| |||||||| |||| || || | ||| | ||||||||||| ||
Sbjct 4826436 ATTCAGAAGGAATCCACACTCCACTTGGTGCTTCGCTTGAGGGGTGG 4826390
Score = 109 bits (120), Expect = 6e-19
Identities = 161/228 (71%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749
||||| || || || || || || || ||||| || |||||| | || || || |
Sbjct 44860133 ATGCAGATCTTTGTTAAGACCCTTACTGGCAAGACAATCACCTTGGAGGTGGAGAGTTCT 44860192
Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809
|||| | | | | | |||| || || | ||||| |||||||| ||| ||||||||
Sbjct 44860193 GACACCATCGACAATGTGAAGGCCAAGATCCAGGACAAGGAGGGCATTCCCCCGGACCAG 44860252
Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869
|| | || || | || ||||| ||||| || || | |||||||| |||||||||
Sbjct 44860253 CAGAGGCTGATATTTGCCGGCAAGCAGCTTGAGGATGGACGCACCCTTGCTGACTACAAC 44860312
Query 40870 ATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGGC 40917
||||||||||| |||| || || | ||| | || |||||||| |||
Sbjct 44860313 ATCCAGAAGGAATCCACACTCCACTTGGTGCTCCGTTTGAGGGGAGGC 44860360
Score = 100 bits (110), Expect = 3e-16
Identities = 144/203 (71%), Gaps = 0/203 (0%)
Strand=Plus/Minus
Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749
||||| || || ||||| || ||||| ||||| || || ||| | || || || | |
Sbjct 25980556 ATGCAGATCTTTGTAAAGACTCTCACTGGCAAGACAATTACCTTGGAAGTGGAGAGCTCG 25980497
Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809
|||| | | | |||||| || || | || ||||| || ||||| | ||||||
Sbjct 25980496 GACACAATTGACAATGTCAAGGCCAAGATCCAAGATAAAGAAGGTATCCCTCCAGACCAG 25980437
Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869
|| | ||||||| || || || || || || |||| |||||||| |||||| |||
Sbjct 25980436 CAGAGGCTCATCTTTGCTGGGAAGCAACTTGAGGACGGTCGCACCCTTGCCGACTATAAC 25980377
Query 40870 ATCCAGAAGGAGGCCACGCTGCA 40892
|||||||||||| |||| || ||
Sbjct 25980376 ATCCAGAAGGAGTCCACCCTACA 25980354
Score = 98.7 bits (108), Expect = 1e-15
Identities = 144/204 (71%), Gaps = 0/204 (0%)
Strand=Plus/Plus
Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749
||||| || || || || || ||||| ||||| ||||| ||| | || || || |
Sbjct 44860361 ATGCAGATCTTTGTGAAGACCCTCACTGGCAAGACCATTACCCTTGAGGTTGAGAGTTCT 44860420
Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809
|||| | | | | | || | || || | ||||| ||||| ||||| | ||||||
Sbjct 44860421 GACACCATTGATAATGTGAAAGCTAAGATCCAAGACAAGGAGGGTATCCCACCAGACCAG 44860480
Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869
|| ||||||||| || ||||| ||||| || || | || ||||| || ||||||
Sbjct 44860481 CAGAGACTCATCTTTGCCGGCAAGCAGCTTGAGGATGGCCGTACCCTTGCAGATTACAAC 44860540
Query 40870 ATCCAGAAGGAGGCCACGCTGCAT 40893
|||||||||||| |||| || |||
Sbjct 44860541 ATCCAGAAGGAGTCCACCCTCCAT 44860564
Score = 95.1 bits (104), Expect = 1e-14
Identities = 149/211 (71%), Gaps = 2/211 (1%)
Strand=Plus/Plus
Query 40689 AATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCAC 40748
|||||| || || || || || | || || || |||||||| | || ||||| | |
Sbjct 44860816 AATGCAGATTTTTGTCAAGACTTTGACCGGAAAGACCATCACTCTGGAGGTCGAGAGCTC 44860875
Query 40749 CGACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACC 40807
|||| | | | |||| | |||| || || | ||||| || || |||||| | ||||
Sbjct 44860876 AGACACCATTGACAACG-TGAAGGCCAAGATCCAGGACAAGGAAGGTATCCCCCCAGACC 44860934
Query 40808 AGCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACA 40867
| ||| | | |||| || || || ||| |||| || | ||||||||| |||||||
Sbjct 44860935 AACAAAGGTTGATCTTTGCTGGAAAGCAGTTGGAAGATGGGCGCACCCTGGCAGACTACA 44860994
Query 40868 ACATCCAGAAGGAGGCCACGCTGCATCTAGT 40898
| |||||||||||| |||| || || || ||
Sbjct 44860995 ATATCCAGAAGGAGTCCACACTTCACCTTGT 44861025
Score = 89.7 bits (98), Expect = 5e-13
Identities = 145/209 (69%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749
||||| || || || || || ||||| || |||||||| ||| | || ||||| | |
Sbjct 25979872 ATGCAGATTTTTGTCAAGACACTCACTGGAAAAACCATTACCTTGGAAGTCGAGAGCTCT 25979813
Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809
|| | | | | |||||| ||||||| || || ||||| ||||| | ||||||
Sbjct 25979812 GATACAATTGACAATGTCAAGGCCAAAATTCAGGATAAGGAGGGTATCCCACCAGACCAG 25979753
Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869
||| | | |||| || || || |||||||| || | || || | || |||||
Sbjct 25979752 CAAAGGTTGATCTTTGCTGGAAAGCAGCTGGAGGATGGACGAACTTTGGCAGATTACAAT 25979693
Query 40870 ATCCAGAAGGAGGCCACGCTGCATCTAGT 40898
|||||||||||| | || ||||| || ||
Sbjct 25979692 ATCCAGAAGGAGTCGACTCTGCACCTTGT 25979664
Score = 89.7 bits (98), Expect = 5e-13
Identities = 156/227 (69%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749
|||||||| || ||||| || | || || || |||||||| | || ||||| | |
Sbjct 25980100 ATGCAAATTTTTGTAAAGACTTTGACTGGGAAGACCATCACGTTGGAGGTCGAGAGCTCT 25980041
Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809
|||| | | | | |||||| ||||| | || || || || ||||| | |||||
Sbjct 25980040 GACACCATTGACAATGTCAAGGCTAAAATCCAGGATAAGGAAGGAATCCCACCAGACCAA 25979981
Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869
||| | || || | || || ||||| || || || | || ||||| |||||||||
Sbjct 25979980 CAAAGGCTTATTTTTGCTGGTAAACAACTTGAGGATGGACGGACCCTTGCTGACTACAAC 25979921
Query 40870 ATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGG 40916
|| |||||||| |||| || || | ||| | || |||| |||||
Sbjct 25979920 ATTCAGAAGGAATCCACCCTCCACTTGGTGCTTCGACTGAGAGGCGG 25979874
Score = 86.0 bits (94), Expect = 6e-12
Identities = 147/211 (70%), Gaps = 2/211 (1%)
Strand=Plus/Minus
Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749
||||| || || || || || | || || || ||||||||| | || || || | |
Sbjct 25980328 ATGCAGATCTTTGTTAAGACTTTGACTGGAAAGACCATCACCTTGGAGGTTGAGAGCTCT 25980269
Query 40750 GACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808
|||| | | |||| | || | ||||| | ||||| |||||||||||| | |||||
Sbjct 25980268 GACACTATTGATAACG-TGAAAGCTAAAATCCAGGACAAGGAGGGCATCCCCCCAGACCA 25980210
Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868
|| | ||||||| || ||||| || ||||| || | ||||| || ||||| ||
Sbjct 25980209 ACAGAGGCTCATCTTTGCTGGCAAGCAACTGGAAGATGGACGCACTCTAGCTGACTATAA 25980150
Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGTG 40899
||| || ||||| |||| || || || |||
Sbjct 25980149 CATTCAAAAGGAATCCACACTCCACCTGGTG 25980119
>seq6
Length=26894541
Score = 105 bits (116), Expect = 7e-18
Identities = 151/210 (72%), Gaps = 2/210 (1%)
Strand=Plus/Plus
Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749
||||| || ||||| ||||| || || ||||||||||| || | || ||||| |
Sbjct 10380194 ATGCAGATCTTCGTGAAAACCCTGACAGGCAAAACCATAACTCTTGAAGTCGAGAATTCT 10380253
Query 40750 GACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808
|| | | | |||| |||| | ||||| | |||||||| || ||||| | || ||
Sbjct 10380254 GATACAATCGACAACG-TCAAAGTCAAAATCCAAGACAAAGAAGGTATCCCTCCTGATCA 10380312
Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868
|||||| || || | ||| |||||||| || || |||| || ||||| ||| |||||
Sbjct 10380313 GCAACGCCTGATTTTCGCTGGCAAACAACTCGAGGACGGCCGTACCCTTGCCGATTACAA 10380372
Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGT 40898
|||||| ||||| |||| || || || ||
Sbjct 10380373 CATCCAAAAGGAATCCACACTCCACCTTGT 10380402
>seq4
Length=23188140
Score = 100 bits (110), Expect = 3e-16
Identities = 152/214 (71%), Gaps = 2/214 (1%)
Strand=Plus/Minus
Query 40686 AAAAATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGC 40745
||| ||||| || ||||| ||||| | || ||||| || || ||| | || || ||
Sbjct 1307542 AAAGATGCAGATCTTCGTGAAAACTTTGACCGGCAAGACTATAACCCTTGAGGTGGAGAG 1307483
Query 40746 CACCGACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGG 40804
|| ||||| | | | |||| |||| | || |||| ||||| ||||||||||| |||
Sbjct 1307482 CAGCGACACCATCGACAACG-TCAAAGCCAAGATTCAAGACAAGGAGGGCATCCCACCGG 1307424
Query 40805 ACCAGCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACT 40864
| || ||||| | |||| ||| || |||||||| || || | || || | ||| |
Sbjct 1307423 ATCAACAACGTTTGATCTTCGCCGGGAAACAGCTCGAAGATGGTCGGACTTTGGCCGATT 1307364
Query 40865 ACAACATCCAGAAGGAGGCCACGCTGCATCTAGT 40898
|||| || ||||||||| ||| || || || ||
Sbjct 1307363 ACAATATTCAGAAGGAGAGCACCCTCCACCTTGT 1307330
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 515203009236640
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |