Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Populus_20trichocarpa_20[refseq_20GCF_5F000002775.3_202013-10-18] 2,514 sequences; 417,286,671 total letters Query= NC_002331.1 Length=178733 Score E Sequences producing significant alignments: (Bits) Value seq11 127 2e-24 seq15 111 2e-19 seq7 109 6e-19 seq1 105 8e-18 seq6 104 3e-17 seq17 102 9e-17 seq4 100 3e-16 seq16 96.9 4e-15 seq3 82.4 9e-11 >seq11 Length=18885544 Score = 127 bits (140), Expect = 2e-24 Identities = 171/233 (73%), Gaps = 4/233 (2%) Strand=Plus/Minus Query 42957 CCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCC 43016 ||||||| | ||| | || | ||| | ||||||||||| |||||||||||||| ||| Sbjct 145360 CCTCCTCGGAGACGGAGGACAAGATGGAGGGTGCTCTCCTTCTGAATATTGTAATCGGCC 145301 Query 43017 AGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGC 43076 | ||| || | || || |||||||| ||||||||||| || ||||| || || | || Sbjct 145300 AAAGTTCGGCCATCTTCGAGCTGCTTTCCAGCGAATATTAGACGCTGTTGATCCGGTGGG 145241 Query 43077 ACGCTCTCCTTGTCCATGATTTTTTG-TTTGAGCGTCG-CCACCGTGTCGCTCGATTCCA 43134 | || ||||||| | ||| | || | |||| ||| | | | |||||||| |||| Sbjct 145240 ATGCCTTCCTTGT-CTTGAATCTTGGCCTTGA-CGTTGTCGATGGTGTCGCTGCTCTCCA 145183 Query 43135 CATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCATTTTT 43187 | || | |||||||| ||||| || || || || || ||||| ||||| ||| Sbjct 145182 CCTCCAGAGTGATGGTCTTGCCGGTGAGGGTTTTCACGAAGATCTGCATGTTT 145130 Score = 114 bits (126), Expect = 1e-20 Identities = 164/230 (71%), Gaps = 6/230 (3%) Strand=Plus/Minus Query 42957 CCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCC 43016 || ||||| ||||| | |||||| || | ||| |||||| || || ||||||||||| Sbjct 16429782 CCACCTCTCAAACGGAGCACCAAGTGGAGGGTGGACTCCTTCTGGATGTTGTAATCAGCA 16429723 Query 43017 AGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGC 43076 || || || | || || |||||||| || ||||| || || | ||||||||| | || Sbjct 16429722 AGGGTGCGGCCATCCTCAAGCTGCTTGCCGGCGAAAATCAGCCTCTGCTGGTCTGGTGGG 16429663 Query 43077 ACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCGCCACCGTGTC---GCTCGATTCC 43133 | | |||||||||| ||| || || | | | | ||||| ||| |||| Sbjct 16429662 ATTCCCTCCTTGTCCTGGATCTTGGCCTTAACATTATCAATAGTGTCTGAGCT---TTCC 16429606 Query 43134 ACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183 || || | |||||||| ||||| || || ||||| || ||||||||||| Sbjct 16429605 ACCTCAAGGGTGATGGTCTTGCCAGTAAGAGTCTTGACGAAGATTTGCAT 16429556 >seq15 Length=15134944 Score = 111 bits (122), Expect = 2e-19 Identities = 139/191 (73%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 42994 CCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATA 43053 |||| || |||||||||||||| || || || | || || |||||||| ||||| || | Sbjct 555836 CCTTCTGGATATTGTAATCAGCAAGGGTACGGCCATCTTCCAGCTGCTTCCCAGCAAAGA 555895 Query 43054 TGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCG 43113 | |||| |||||| || | || | | ||||||||| |||||| ||||| | Sbjct 555896 TCAGTCTCTGCTGATCAGGAGGAATCCCTTCCTTGTCCTGGATTTTGGCTTTGACATTGT 555955 Query 43114 CCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAA 43173 | | || || || ||||| || || | |||||||| ||||| || || || || |||| Sbjct 555956 CAATAGTATCACTAGATTCGACCTCAAGAGTGATGGTCTTGCCAGTCAGGGTTTTCACAA 556015 Query 43174 AGATTTGCATT 43184 |||| |||||| Sbjct 556016 AGATCTGCATT 556026 >seq7 Length=15101417 Score = 109 bits (120), Expect = 6e-19 Identities = 152/212 (72%), Gaps = 6/212 (3%) Strand=Plus/Plus Query 42975 ACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCT 43034 ||||| || | ||| |||||| ||||| ||||||||||| ||||| ||| | || || Sbjct 1458228 ACCAAGTGGAGGGTGGACTCCTTCTGAATGTTGTAATCAGCAAGAGTGCGCCCATCCTCA 1458287 Query 43035 AGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATG 43094 || ||||| ||||| || ||||||| ||| ||||| | || | || |||||| || | Sbjct 1458288 AGTTGCTTCCCAGCAAAGATGAGTCTCTGTTGGTCTGGAGGGATGCCCTCCTTATCTTGG 1458347 Query 43095 ATTTTTTGTTTGAGCGTCGCCACCGTGTC---GCTCGATTCCACATCGACCGTGATGGTT 43151 ||||| || | | | | ||||| |||| ||||| || | |||||||| Sbjct 1458348 ATTTTAGCCTTCACATTATCAATGGTGTCAGAGCTC---TCCACCTCCAAGGTGATGGTC 1458404 Query 43152 TTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183 || || || || ||||| |||||||| ||||| Sbjct 1458405 TTCCCGGTGAGTGTCTTGACAAAGATCTGCAT 1458436 Score = 96.9 bits (106), Expect = 4e-15 Identities = 160/230 (70%), Gaps = 6/230 (3%) Strand=Plus/Plus Query 42957 CCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCC 43016 ||||| | || |||| |||||| || | || |||||| || || ||||| |||||| Sbjct 1458438 CCTCCACGCAAGCGCAGCACCAAGTGAAGAGTAGACTCCTTCTGGATGTTGTAGTCAGCC 1458497 Query 43017 AGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGC 43076 ||||| ||| | || ||||||||||| ||||| || || || | ||| || || | || Sbjct 1458498 AGAGTGCGCCCATCCTCTAGCTGCTTGCCAGCAAAGATAAGCCTCTGTTGATCTGGGGGG 1458557 Query 43077 ACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCGCCACCGTGTC---GCTCGATTCC 43133 | || ||| |||||| ||||||| |||| | | | ||||| |||| || Sbjct 1458558 ATGCCCTCTTTGTCCTGGATTTTTGCCTTGACATTATCGATGGTGTCAGAGCTC---TCT 1458614 Query 43134 ACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183 || || | || ||||| || || || | ||||| || || || ||||| Sbjct 1458615 ACCTCCAAGGTAATGGTCTTCCCAGTCAAAGTCTTCACGAAAATCTGCAT 1458664 Score = 84.2 bits (92), Expect = 3e-11 Identities = 143/206 (69%), Gaps = 6/206 (3%) Strand=Plus/Plus Query 42981 TGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGC 43040 |||| ||| |||||| || |||||||||||||||| |||| | || || |||||| Sbjct 1458006 TGCAGAGTGGACTCCTTCTGGATATTGTAATCAGCCAAGGTCCTTCCATCTTCAAGCTGC 1458065 Query 43041 TTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTT 43100 || || || || || | | ||||||||| | || | | |||||||||| |||||| Sbjct 1458066 TTCCCGGCAAAGATCAACCTCTGCTGGTCTGGTGGAATCCCCTCCTTGTCCTGGATTTTG 1458125 Query 43101 TGTTTGAGCGTCGCCACCGTGTC---GCTCGATTCCACATCGACCGTGATGGTTTTGCCC 43157 || | | | | ||||| |||| || || || | || ||||| || || Sbjct 1458126 GCCTTAACATTGTCAATTGTGTCCGAGCTC---TCAACTTCCAAGGTTATGGTCTTCCCA 1458182 Query 43158 GTTAGCGTCTTTACAAAGATTTGCAT 43183 || || ||||| |||||||| ||||| Sbjct 1458183 GTGAGGGTCTTCACAAAGATCTGCAT 1458208 >seq1 Length=48367220 Score = 105 bits (116), Expect = 8e-18 Identities = 162/230 (70%), Gaps = 6/230 (3%) Strand=Plus/Minus Query 42957 CCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCC 43016 || ||||| || || | ||||||||| | || |||||| ||||| ||||| || || Sbjct 44860131 CCACCTCTCAATCGGAGCACCAAATGAAGGGTAGACTCCTTCTGAATGTTGTAGTCGGCA 44860072 Query 43017 AGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGC 43076 || || || | || || |||||||| ||||| || || || | ||||||||| | || Sbjct 44860071 AGGGTACGGCCATCCTCAAGCTGCTTGCCAGCAAAAATAAGCCTCTGCTGGTCTGGTGGG 44860012 Query 43077 ACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCGCCACCGTGTC---GCTCGATTCC 43133 | | |||||||||| ||| || || | | | | ||||| ||| |||| Sbjct 44860011 ATCCCCTCCTTGTCCTGGATCTTGGCCTTTACATTATCAATAGTGTCAGAGCT---TTCC 44859955 Query 43134 ACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183 || || | |||||||| ||||| || || ||||| || ||||||||||| Sbjct 44859954 ACCTCAAGGGTGATGGTCTTGCCAGTGAGAGTCTTGACGAAGATTTGCAT 44859905 Score = 100 bits (110), Expect = 3e-16 Identities = 161/230 (70%), Gaps = 6/230 (3%) Strand=Plus/Plus Query 42957 CCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCC 43016 || ||||| | || | ||||| || | |||| ||||||||||| || || ||||| Sbjct 25980102 CCACCTCTAAGTCGAAGCACCAGGTGGAGTGTGGATTCCTTTTGAATGTTATAGTCAGCT 25980161 Query 43017 AGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGC 43076 ||||| || | || || || ||||| ||||| || ||||| | ||| ||||| | || Sbjct 25980162 AGAGTGCGTCCATCTTCCAGTTGCTTGCCAGCAAAGATGAGCCTCTGTTGGTCTGGGGGG 25980221 Query 43077 ACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCGCCACCGTGTC---GCTCGATTCC 43133 | || |||||||||| |||||| ||| | | | | ||||| |||| || Sbjct 25980222 ATGCCCTCCTTGTCCTGGATTTTAGCTTTCACGTTATCAATAGTGTCAGAGCTC---TCA 25980278 Query 43134 ACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183 || || | |||||||| || || || | ||||| |||||||| ||||| Sbjct 25980279 ACCTCCAAGGTGATGGTCTTTCCAGTCAAAGTCTTAACAAAGATCTGCAT 25980328 Score = 87.8 bits (96), Expect = 2e-12 Identities = 158/230 (69%), Gaps = 6/230 (3%) Strand=Plus/Plus Query 42957 CCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCC 43016 || ||||| | || | |||||| || | ||| ||||| ||||| ||||| ||||| Sbjct 25979874 CCGCCTCTCAGTCGAAGCACCAAGTGGAGGGTGGATTCCTTCTGAATGTTGTAGTCAGCA 25979933 Query 43017 AGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGC 43076 || ||||| | || || || || |||||||| || || || | || ||||| | || Sbjct 25979934 AGGGTCCGTCCATCCTCAAGTTGTTTACCAGCAAAAATAAGCCTTTGTTGGTCTGGTGGG 25979993 Query 43077 ACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCGCCACCGTGTC---GCTCGATTCC 43133 | | ||||| ||| |||||| |||| | | | ||||| |||| || Sbjct 25979994 ATTCCTTCCTTATCCTGGATTTTAGCCTTGACATTGTCAATGGTGTCAGAGCTC---TCG 25980050 Query 43134 ACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183 || || | ||||||||| || || || | ||||||||||| |||||||| Sbjct 25980051 ACCTCCAACGTGATGGTCTTCCCAGTCAAAGTCTTTACAAAAATTTGCAT 25980100 >seq6 Length=26894541 Score = 104 bits (114), Expect = 3e-17 Identities = 164/231 (71%), Gaps = 8/231 (3%) Strand=Plus/Minus Query 42957 CCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCC 43016 || ||||| ||||||| |||| ||||| || |||||||||||| || ||||| || Sbjct 10380876 CCGCCTCTCAAACGCAGTACCAGATGCAGAGTAGACTCCTTTTGAATGTTATAATCTGCA 10380817 Query 43017 AGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGC 43076 ||||||| | | || || | |||||| || || || ||||| | |||||| || | || Sbjct 10380816 AGAGTCCTCCCATCTTCCAACTGCTTCCCTGCAAAGATGAGCCTCTGCTGATCCGGGGGA 10380757 Query 43077 ACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCG-TCGCCACCGTGTC---GCTCGATTC 43132 | | ||||||||| ||| | || | || | || | | | || || ||| ||| Sbjct 10380756 ATCCCTTCCTTGTCC-TGAATCTTGGCTTTAACGTTATCAATTGTATCAGAGCT---TTC 10380701 Query 43133 CACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183 || || | |||||| || || || |||| ||||| || ||||||||||| Sbjct 10380700 AACCTCAAGCGTGATTGTATTTCCAGTTAAAGTCTTAACGAAGATTTGCAT 10380650 Score = 100 bits (110), Expect = 3e-16 Identities = 142/196 (72%), Gaps = 8/196 (4%) Strand=Plus/Minus Query 42992 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 43051 |||||| |||||||||||||| || ||||||| | | || |||| ||||| ||||| || Sbjct 10381069 CTCCTTCTGAATATTGTAATCCGCAAGAGTCCTCCCATCCTCTAATTGCTTCCCAGCAAA 10381010 Query 43052 TATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 43111 ||| || | ||||||||| | || | | ||||| ||| ||| | || | || ||| Sbjct 10381009 TATAAGCCTCTGCTGGTCCGGTGGAATACCTTCCTTATCC-TGAATCTTGGCTTTCACGT 10380951 Query 43112 CG-CCACCGTGTC---GCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCT 43167 | | | ||| || |||| || || || | |||||||| || || || || |||| Sbjct 10380950 TGTCTATCGTATCAGAGCTC---TCAACTTCAAGAGTGATGGTCTTCCCTGTGAGAGTCT 10380894 Query 43168 TTACAAAGATTTGCAT 43183 | |||||||| ||||| Sbjct 10380893 TGACAAAGATCTGCAT 10380878 >seq17 Length=14661173 Score = 102 bits (112), Expect = 9e-17 Identities = 151/213 (71%), Gaps = 6/213 (3%) Strand=Plus/Plus Query 42974 CACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATC 43033 ||||||||| | ||| |||||| || || ||||||||||| ||||| ||| | || || Sbjct 4942840 CACCAAATGAAGGGTGGACTCCTTCTGGATGTTGTAATCAGCGAGAGTGCGCCCATCCTC 4942899 Query 43034 TAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCAT 43093 || ||||| ||||| || ||||| | ||| ||||| | || | || ||| || || Sbjct 4942900 AAGTTGCTTGCCAGCAAAGATGAGCCTCTGTTGGTCTGGAGGGATGCCCTCTTTATCTTG 4942959 Query 43094 GATTTTTTGTTTGAGCGTCGCCACCGTGTC---GCTCGATTCCACATCGACCGTGATGGT 43150 |||||| |||| | | | ||||| |||| ||||| || | |||||||| Sbjct 4942960 GATTTTAGCCTTGACATTATCAATGGTGTCGGAGCTC---TCCACCTCCAAGGTGATGGT 4943016 Query 43151 TTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183 || || || | ||||| ||||| |||||||| Sbjct 4943017 CTTCCCAGTCAAAGTCTTCACAAAAATTTGCAT 4943049 Score = 91.5 bits (100), Expect = 2e-13 Identities = 142/203 (70%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 42981 TGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGC 43040 ||||||||| ||||||||| |||||||| || ||||| || || | || || | |||| Sbjct 1748095 TGCAATGTGGACTCCTTTTGGATATTGTAGTCTGCCAGGGTACGTCCATCTTCCAACTGC 1748036 Query 43041 TTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTT 43100 |||||||| || || | | ||||||||| | || | | ||||||||| ||| ||| Sbjct 1748035 TTACCAGCAAAGATCAACCTCTGCTGGTCTGGTGGGATCCCCTCCTTGTCTTGGATCTTT 1747976 Query 43101 TGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTT 43160 || | | | | || ||| |||||| |||| || ||||| || || || Sbjct 1747975 GTCTTCACGTTATCAATGGTATCGGAGCTTTCCACCTCGAGAGTAATGGTCTTTCCTGTC 1747916 Query 43161 AGCGTCTTTACAAAGATTTGCAT 43183 | ||||| ||||| || ||||| Sbjct 1747915 AATGTCTTGACAAAAATCTGCAT 1747893 >seq4 Length=23188140 Score = 100 bits (110), Expect = 3e-16 Identities = 147/203 (72%), Gaps = 4/203 (2%) Strand=Plus/Plus Query 42987 GTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCA 43046 ||||||||||| |||||||||||||| |||| |||||| | || || ||||| || || Sbjct 1307342 GTGCTCTCCTTCTGAATATTGTAATCGGCCAAAGTCCGACCATCTTCGAGCTGTTTCCCG 1307401 Query 43047 GCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTG-TTT 43105 ||||| || | || || || || | || | || |||||||| | ||| | || | ||| Sbjct 1307402 GCGAAGATCAAACGTTGTTGATCCGGTGGGATGCCCTCCTTGT-CTTGAATCTTGGCTTT 1307460 Query 43106 GAGCGTCG-CCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCG 43164 || ||| | | | |||||||| ||||| || | || || || ||||| || | | Sbjct 1307461 GA-CGTTGTCGATGGTGTCGCTGCTCTCCACCTCAAGGGTTATAGTCTTGCCGGTCAAAG 1307519 Query 43165 TCTTTACAAAGATTTGCATTTTT 43187 | || || ||||| ||||| ||| Sbjct 1307520 TTTTCACGAAGATCTGCATCTTT 1307542 Score = 87.8 bits (96), Expect = 2e-12 Identities = 142/199 (71%), Gaps = 4/199 (2%) Strand=Plus/Plus Query 42987 GTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCA 43046 ||||||||||| |||||||| ||||| |||| |||||| | || || ||||| || || Sbjct 1307114 GTGCTCTCCTTCTGAATATTATAATCGGCCAAAGTCCGACCATCTTCGAGCTGTTTCCCG 1307173 Query 43047 GCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTG-TTT 43105 || ||||| | || || || || | || | || |||||| | | ||| | || | || Sbjct 1307174 GCAAATATCAAACGTTGTTGATCCGGTGGGATGCCCTCCTTAT-CTTGAATCTTGGCCTT 1307232 Query 43106 GAGCGTCG-CCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCG 43164 || ||| | | | |||||||| ||||| || | || ||||| || || || | | Sbjct 1307233 GA-CGTTGTCGATGGTGTCGCTGCTCTCCACCTCAAGGGTAATGGTCTTCCCTGTCAAGG 1307291 Query 43165 TCTTTACAAAGATTTGCAT 43183 |||| ||||| || ||||| Sbjct 1307292 TCTTAACAAATATCTGCAT 1307310 Score = 84.2 bits (92), Expect = 3e-11 Identities = 138/194 (71%), Gaps = 4/194 (2%) Strand=Plus/Plus Query 42992 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 43051 ||| ||||| |||||||| |||||||||||||| | || || |||||||| || || || Sbjct 1306891 CTCTTTTTGGATATTGTAGTCAGCCAGAGTCCGGCCATCTTCGAGCTGCTTTCCGGCAAA 1306950 Query 43052 TATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTG-TTTGAGCG 43110 || | || || || || | || | || |||||||| | ||| | || | |||| || Sbjct 1306951 GATCAAGCGTTGTTGATCAGGTGGGATGCCCTCCTTGT-CTTGAATCTTGGCCTTGA-CG 1307008 Query 43111 TCG-CCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTT 43169 | | | | |||||||| || || || | || ||||| || || || | ||||| Sbjct 1307009 TTGTCGATGGTGTCGCTGCTCTCTACCTCTAGAGTAATGGTCTTCCCTGTCAAGGTCTTC 1307068 Query 43170 ACAAAGATTTGCAT 43183 ||||| || ||||| Sbjct 1307069 ACAAAAATCTGCAT 1307082 >seq16 Length=14134809 Score = 96.9 bits (106), Expect = 4e-15 Identities = 89/113 (79%), Gaps = 0/113 (0%) Strand=Plus/Plus Query 42957 CCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCC 43016 |||||||||||||||| ||||| ||| | || ||||||||||||||| |||||||| Sbjct 6733542 CCTCCTCTTAAACGCAGCACCAGATGAAGAGTAGACTCCTTTTGAATATTATAATCAGCA 6733601 Query 43017 AGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTC 43069 || |||| | || ||||||||||| || || || || || | |||||| || Sbjct 6733602 AGGGTCCTTCCATCTTCTAGCTGCTTCCCTGCAAAGATTAGCCTCTGCTGATC 6733654 >seq3 Length=20216275 Score = 82.4 bits (90), Expect = 9e-11 Identities = 63/75 (84%), Gaps = 0/75 (0%) Strand=Plus/Minus Query 60057 AAAAATTTTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATAC 60116 ||||| | || || || ||| ||||||||| |||| |||||||||||||||| |||| Sbjct 10871273 AAAAACTATCGCCGTTGCCGGGGATCGAACCCGGGTCACCCGCGTGACAGGCGGGAATAC 10871214 Query 60117 TCACCACTATACTAC 60131 ||||||||||||||| Sbjct 10871213 TCACCACTATACTAC 10871199 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 571799630631920