Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Populus_20trichocarpa_20[refseq_20GCF_5F000002775.3_202013-10-18] 2,514 sequences; 417,286,671 total letters Query= NC_004156.2 Length=231621 Score E Sequences producing significant alignments: (Bits) Value seq9 87.8 3e-12 >seq9 Length=12942059 Score = 87.8 bits (96), Expect = 3e-12 Identities = 81/103 (79%), Gaps = 0/103 (0%) Strand=Plus/Minus Query 70296 ATGGCAAATTGTCATGCTTAATGTATCAGAGGAGTGCCGACATGGGCCTCGGTGTACCCT 70355 |||| ||||||||||| |||||| ||| | ||| ||||||||||| ||||| |||| Sbjct 9984942 ATGGAGAATTGTCATGCCAAATGTACCAGCGTTCTGCTGACATGGGCCTTGGTGTGCCCT 9984883 Query 70356 TTAACATTGCAAGCTATTCTATGTTGACGCACATGATTGCTCA 70398 | | ||||||| ||| || | ||||| ||||| |||||||| Sbjct 9984882 TCAGCATTGCATCTTATGCTCTCTTGACACACATCATTGCTCA 9984840 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 741035912214640