Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Populus_20trichocarpa_20[refseq_20GCF_5F000002775.3_202013-10-18]
2,514 sequences; 417,286,671 total letters
Query= NC_008293.1
Length=135454
Score E
Sequences producing significant alignments: (Bits) Value
seq1 138 1e-27
seq17 125 6e-24
seq11 118 9e-22
seq7 116 3e-21
seq6 116 3e-21
seq14 111 1e-19
seq2 100 2e-16
seq4 98.7 9e-16
seq12 91.5 1e-13
seq5 87.8 2e-12
seq15 82.4 7e-11
>seq1
Length=48367220
Score = 138 bits (152), Expect = 1e-27
Identities = 169/229 (74%), Gaps = 4/229 (2%)
Strand=Plus/Minus
Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058
|||||||| ||||||||||||||||| || || ||||||| | || || ||| |||
Sbjct 25980100 ATGCAAATTTTTGTAAAGACTTTGACTGGGAAGACCATCACGTTGGAGGTCGAGAGCTCT 25980041
Query 25059 GACACTATCGAGTCACTG--AAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACC 25116
||||| || || || || ||| |||||| || || ||||| || ||||| ||||
Sbjct 25980040 GACACCATTGA--CAATGTCAAGGCTAAAATCCAGGATAAGGAAGGAATCCCACCAGACC 25979983
Query 25117 AACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACA 25176
|||| || |||||||||| || |||||| | || |||| || || | | || ||||
Sbjct 25979982 AACAAAGGCTTATTTTTGCTGGTAAACAACTTGAGGATGGACGGACCCTTGCTGACTACA 25979923
Query 25177 ATATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGG 25225
| ||||| || |||||||| || || || ||||| | || ||||| ||
Sbjct 25979922 ACATTCAGAAGGAATCCACCCTCCACTTGGTGCTTCGACTGAGAGGCGG 25979874
Score = 134 bits (148), Expect = 1e-26
Identities = 168/228 (74%), Gaps = 2/228 (1%)
Strand=Plus/Minus
Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058
||||| || ||||| ||||||||||| || || ||||||| | || || ||| |||
Sbjct 25980328 ATGCAGATCTTTGTTAAGACTTTGACTGGAAAGACCATCACCTTGGAGGTTGAGAGCTCT 25980269
Query 25059 GACACTATCGAGTCAC-TGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCA 25117
|||||||| || | || |||| |||||| ||||| || || || || || |||||
Sbjct 25980268 GACACTATTGA-TAACGTGAAAGCTAAAATCCAGGACAAGGAGGGCATCCCCCCAGACCA 25980210
Query 25118 ACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAA 25177
|||| || | || ||||| ||||| ||| | ||||||| |||||| | | || || ||
Sbjct 25980209 ACAGAGGCTCATCTTTGCTGGCAAGCAACTGGAAGATGGACGCACTCTAGCTGACTATAA 25980150
Query 25178 TATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGG 25225
|||||||| |||||||| || || | ||||| | || ||||| ||
Sbjct 25980149 CATTCAAAAGGAATCCACACTCCACCTGGTGCTTCGACTTAGAGGTGG 25980102
Score = 113 bits (124), Expect = 4e-20
Identities = 152/212 (72%), Gaps = 0/212 (0%)
Strand=Plus/Plus
Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058
|||||||| || || |||||| | || || || ||||||| | || ||||| |||
Sbjct 44859905 ATGCAAATCTTCGTCAAGACTCTCACTGGCAAGACCATCACCCTTGAGGTGGAAAGCTCT 44859964
Query 25059 GACACTATCGAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAA 25118
|||||||| || | ||| || ||| ||||| || ||||| ||||| |||||
Sbjct 44859965 GACACTATTGATAATGTAAAGGCCAAGATCCAGGACAAGGAGGGGATCCCACCAGACCAG 44860024
Query 25119 CAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAAT 25178
||| || |||||||||| ||||| || | || |||| || || | | ||| |||||
Sbjct 44860025 CAGAGGCTTATTTTTGCTGGCAAGCAGCTTGAGGATGGCCGTACCCTTGCCGACTACAAC 44860084
Query 25179 ATTCAAAAAGAATCCACGCTACATTTAGTGCT 25210
||||| || || || || || ||||| |||||
Sbjct 44860085 ATTCAGAAGGAGTCTACCCTTCATTTGGTGCT 44860116
Score = 111 bits (122), Expect = 1e-19
Identities = 147/204 (72%), Gaps = 0/204 (0%)
Strand=Plus/Plus
Query 24998 AATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTC 25057
|||||| || ||||| |||||||||||||| || ||||||| | || || ||| ||
Sbjct 44860816 AATGCAGATTTTTGTCAAGACTTTGACCGGAAAGACCATCACTCTGGAGGTCGAGAGCTC 44860875
Query 25058 TGACACTATCGAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCA 25117
||||| || || ||||| || ||| ||||| ||||| || || || |||||
Sbjct 44860876 AGACACCATTGACAACGTGAAGGCCAAGATCCAGGACAAGGAAGGTATCCCCCCAGACCA 44860935
Query 25118 ACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAA 25177
||| || | || ||||| || || || || ||||||| ||||| ||| || |||||
Sbjct 44860936 ACAAAGGTTGATCTTTGCTGGAAAGCAGTTGGAAGATGGGCGCACCCTGGCAGACTACAA 44860995
Query 25178 TATTCAAAAAGAATCCACGCTACA 25201
||| || || || ||||| || ||
Sbjct 44860996 TATCCAGAAGGAGTCCACACTTCA 44861019
Score = 104 bits (114), Expect = 2e-17
Identities = 150/212 (71%), Gaps = 0/212 (0%)
Strand=Plus/Plus
Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058
||||| || ||||| ||||| | || || || | ||||| | || |||||| |||
Sbjct 44860133 ATGCAGATCTTTGTTAAGACCCTTACTGGCAAGACAATCACCTTGGAGGTGGAGAGTTCT 44860192
Query 25059 GACACTATCGAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAA 25118
||||| ||||| ||||| || ||| ||||| || || ||||| || |||||
Sbjct 44860193 GACACCATCGACAATGTGAAGGCCAAGATCCAGGACAAGGAGGGCATTCCCCCGGACCAG 44860252
Query 25119 CAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAAT 25178
||| || | || ||||||||||| || | || |||| ||||| | | || |||||
Sbjct 44860253 CAGAGGCTGATATTTGCCGGCAAGCAGCTTGAGGATGGACGCACCCTTGCTGACTACAAC 44860312
Query 25179 ATTCAAAAAGAATCCACGCTACATTTAGTGCT 25210
|| || || |||||||| || || || |||||
Sbjct 44860313 ATCCAGAAGGAATCCACACTCCACTTGGTGCT 44860344
Score = 96.9 bits (106), Expect = 3e-15
Identities = 151/214 (71%), Gaps = 4/214 (2%)
Strand=Plus/Minus
Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058
||||| || |||||||||||| | || || || | || || | ||||||||| ||
Sbjct 25980556 ATGCAGATCTTTGTAAAGACTCTCACTGGCAAGACAATTACCTTGGAAGTGGAGAGCTCG 25980497
Query 25059 GACACTATCGAGTCACTG--AAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACC 25116
||||| || || || || ||| || ||| || |||||||| || || || ||||
Sbjct 25980496 GACACAATTGA--CAATGTCAAGGCCAAGATCCAAGATAAAGAAGGTATCCCTCCAGACC 25980439
Query 25117 AACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACA 25176
| ||| || | || ||||| || || ||| | || || | |||||| | | ||| || |
Sbjct 25980438 AGCAGAGGCTCATCTTTGCTGGGAAGCAACTTGAGGACGGTCGCACCCTTGCCGACTATA 25980379
Query 25177 ATATTCAAAAAGAATCCACGCTACATTTAGTGCT 25210
| || || || || ||||| ||||| || |||||
Sbjct 25980378 ACATCCAGAAGGAGTCCACCCTACACTTGGTGCT 25980345
>seq17
Length=14661173
Score = 125 bits (138), Expect = 6e-24
Identities = 155/212 (73%), Gaps = 0/212 (0%)
Strand=Plus/Minus
Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058
|||||||| ||||| ||||||||||| || || ||||||| | || |||||| ||
Sbjct 4943049 ATGCAAATTTTTGTGAAGACTTTGACTGGGAAGACCATCACCTTGGAGGTGGAGAGCTCC 4942990
Query 25059 GACACTATCGAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAA 25118
||||| || || | ||| |||||| || ||||| || || || || ||||||
Sbjct 4942989 GACACCATTGATAATGTCAAGGCTAAAATCCAAGATAAAGAGGGCATCCCTCCAGACCAA 4942930
Query 25119 CAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAAT 25178
||| || | || ||||| ||||| ||| | || |||| |||||| | | ||||||||
Sbjct 4942929 CAGAGGCTCATCTTTGCTGGCAAGCAACTTGAGGATGGGCGCACTCTCGCTGATTACAAC 4942870
Query 25179 ATTCAAAAAGAATCCACGCTACATTTAGTGCT 25210
|| || || || ||||| || ||||| |||||
Sbjct 4942869 ATCCAGAAGGAGTCCACCCTTCATTTGGTGCT 4942838
Score = 116 bits (128), Expect = 3e-21
Identities = 155/213 (73%), Gaps = 2/213 (1%)
Strand=Plus/Plus
Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058
||||| || ||||| || || | || || ||| | ||||| | || |||||| ||
Sbjct 1747665 ATGCAGATTTTTGTGAAAACCCTCACTGGAAAAACTATCACCTTGGAGGTGGAGAGCTCG 1747724
Query 25059 GACACTATCGAGTCAC-TGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCA 25117
|| ||||| || | || | ||| ||| ||| || || |||||||| ||||| |||||
Sbjct 1747725 GATACTATTGA-TAACGTCAAGACAAAGATCCAAGATAAGGAAGGGATCCCACCGGACCA 1747783
Query 25118 ACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAA 25177
|| || | |||||||| || ||||| | || |||| |||||| | | || |||||
Sbjct 1747784 GCAAAGGTTGATTTTTGCTGGAAAACAGCTGGAGGATGGTCGCACCCTTGCAGACTACAA 1747843
Query 25178 TATTCAAAAAGAATCCACGCTACATTTAGTGCT 25210
|||||| |||||||| || || ||||| |||||
Sbjct 1747844 TATTCAGAAAGAATCGACTCTGCATTTGGTGCT 1747876
Score = 109 bits (120), Expect = 5e-19
Identities = 152/213 (71%), Gaps = 0/213 (0%)
Strand=Plus/Minus
Query 24998 AATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTC 25057
||||||||| ||||| ||||| |||| || ||| ||||||| | || || ||| ||
Sbjct 4942594 AATGCAAATCTTTGTCAAGACCCTGACTGGAAAAACCATCACCCTGGAGGTTGAGAGTTC 4942535
Query 25058 TGACACTATCGAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCA 25117
||||| || || ||||| |||||| ||||| || ||||||||||| |||||
Sbjct 4942534 AGACACCATTGATAATGTGAAGGCTAAAATCCAGGACAAGGAGGGGATTCCACCAGACCA 4942475
Query 25118 ACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAA 25177
||| | | || ||||| || || || | ||||||| | || ||| ||||||||
Sbjct 4942474 GCAGAGACTGATCTTTGCTGGGAAGCAGCTTGAAGATGGAAGGACCCTGGCAGATTACAA 4942415
Query 25178 TATTCAAAAAGAATCCACGCTACATTTAGTGCT 25210
|| || || || ||||| ||||| | |||||
Sbjct 4942414 CATACAGAAGGAGTCCACTCTACACCTTGTGCT 4942382
Score = 105 bits (116), Expect = 6e-18
Identities = 163/230 (71%), Gaps = 6/230 (3%)
Strand=Plus/Minus
Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058
||||| || ||||| || ||| | || || || ||||||| |||| ||||| |||
Sbjct 4943505 ATGCAGATTTTTGTGAAAACTCTCACTGGCAAGACCATCACCCTCGAGGTGGAAAGCTCT 4943446
Query 25059 GACACTATCGAGTCACTG---AAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGAC 25115
||||| ||||| || || |||| || | || ||||| ||||||||||| || ||
Sbjct 4943445 GACACAATCGA--CAATGTAAAAGCTAAGATCCAG-GACAAGGAAGGGATTCCCCCAGAT 4943389
Query 25116 CAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTAC 25175
|| || || | || ||||| || || ||| |||| |||| ||||| | | || |||
Sbjct 4943388 CAGCAAAGGTTGATCTTTGCTGGGAAGCAACTAGAGGATGGACGCACACTCGCTGACTAC 4943329
Query 25176 AATATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGG 25225
|| || || || || ||||| || || || ||||| | || ||||| ||
Sbjct 4943328 AACATCCAGAAGGAGTCCACCCTCCACTTGGTGCTTCGACTTAGAGGTGG 4943279
Score = 104 bits (114), Expect = 2e-17
Identities = 150/212 (71%), Gaps = 0/212 (0%)
Strand=Plus/Minus
Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058
||||| || ||||| ||||||||||| || || ||||||| | || |||||| ||
Sbjct 4943277 ATGCAGATCTTTGTCAAGACTTTGACTGGGAAGACCATCACCTTGGAGGTGGAGAGCTCC 4943218
Query 25059 GACACTATCGAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAA 25118
||||| || || | ||| |||||| || || || || || || || ||||||
Sbjct 4943217 GACACCATTGATAATGTCAAGGCCAAAATCCAGGATAAGGAGGGCATCCCTCCAGACCAA 4943158
Query 25119 CAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAAT 25178
||| || | || ||||| ||||| || | || |||| || ||| | | || |||||
Sbjct 4943157 CAGAGGCTCATCTTTGCTGGCAAGCAGCTCGAGGATGGACGTACTCTAGCTGACTACAAC 4943098
Query 25179 ATTCAAAAAGAATCCACGCTACATTTAGTGCT 25210
|| || || |||||||| || || || |||||
Sbjct 4943097 ATCCAGAAGGAATCCACCCTTCACTTGGTGCT 4943066
Score = 89.7 bits (98), Expect = 4e-13
Identities = 157/229 (69%), Gaps = 0/229 (0%)
Strand=Plus/Minus
Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058
||||| || ||||| ||||| | || || || | || || | ||||| ||| ||
Sbjct 4942821 ATGCAGATCTTTGTCAAGACCCTCACTGGGAAGACTATAACCCTGGAAGTTGAGAGCTCG 4942762
Query 25059 GACACTATCGAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAA 25118
||||| || || ||||| |||||| || || || ||||| |||||||||||
Sbjct 4942761 GACACCATTGACAATGTGAAGGCCAAAATCCAAGATAAGGAGGGGATCCCACCTGACCAG 4942702
Query 25119 CAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAAT 25178
|| || | || || || || || || | ||||||| | || | | ||||||||
Sbjct 4942701 CAAAGGTTGATCTTCGCTGGAAAGCAGCTTGAAGATGGAAGGACCTTAGCTGATTACAAC 4942642
Query 25179 ATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGGAA 25227
||||| || |||||||| || || || ||||| | || | |||||||
Sbjct 4942641 ATTCAGAAGGAATCCACTCTTCACTTGGTGCTGCGCCTTCGTGGAGGAA 4942593
>seq11
Length=18885544
Score = 118 bits (130), Expect = 9e-22
Identities = 151/206 (73%), Gaps = 4/206 (2%)
Strand=Plus/Plus
Query 24998 AATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTC 25057
||||||||| ||||| ||||||||||| || || ||||||| | || |||||| ||
Sbjct 16430467 AATGCAAATCTTTGTTAAGACTTTGACTGGAAAGACCATCACCCTGGAGGTGGAGAGCTC 16430526
Query 25058 TGACACTATCGAGTCACTG--AAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGAC 25115
||||| || || || || ||| || ||| ||||| ||||| || || ||||||
Sbjct 16430527 AGACACCATTGA--CAATGTCAAGGCTAAGATCCAGGACAAGGAAGGAATACCCCCTGAC 16430584
Query 25116 CAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTAC 25175
||||| || | || |||||||| || || || ||||||| ||||| | | || |||
Sbjct 16430585 CAACAAAGGTTGATCTTTGCCGGAAAGCAGTTGGAAGATGGACGCACCCTAGCAGACTAC 16430644
Query 25176 AATATTCAAAAAGAATCCACGCTACA 25201
||||| || || || ||||| || ||
Sbjct 16430645 AATATCCAGAAGGAGTCCACCCTTCA 16430670
Score = 114 bits (126), Expect = 1e-20
Identities = 165/230 (72%), Gaps = 2/230 (1%)
Strand=Plus/Plus
Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058
||||| || || || |||||||| || || || |||| || | || |||||| |||
Sbjct 16430240 ATGCAGATTTTCGTGAAGACTTTAACTGGGAAGACCATTACCTTGGAGGTGGAGAGCTCT 16430299
Query 25059 GACACTATCGAGTCACTGAA-GCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCA 25117
||||||||||| |||| || |||| ||| ||||| || ||||| ||||| |||||
Sbjct 16430300 GACACTATCGATAATGTGAAGGCCAAAATTCA-GGACAAGGAGGGGATCCCACCGGACCA 16430358
Query 25118 ACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAA 25177
||| || | |||||||| || ||||| | ||||||| | || | | || |||||
Sbjct 16430359 GCAGAGGTTGATTTTTGCTGGAAAACAGCTTGAAGATGGAAGGACACTTGCTGACTACAA 16430418
Query 25178 TATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGGAA 25227
|| || || || || || || || || ||||| |||| | |||||||
Sbjct 16430419 CATCCAGAAGGAGTCAACCCTTCACTTGGTGCTTCGGCTGCGTGGAGGAA 16430468
Score = 91.5 bits (100), Expect = 1e-13
Identities = 160/231 (69%), Gaps = 8/231 (3%)
Strand=Plus/Plus
Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058
||||| || || || || || | ||||| || ||||||| | || ||||||
Sbjct 145134 ATGCAGATCTTCGTGAAAACCCTCACCGGCAAGACCATCACTCTGGAGGTGGAGAGCAGC 145193
Query 25059 GACACTATCGA----GTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGA 25114
||||| ||||| |||| | || || | ||| ||||| ||||| || ||||| ||
Sbjct 145194 GACACCATCGACAACGTCA---AGGCCAAGATTCAA-GACAAGGAAGGCATCCCACCGGA 145249
Query 25115 CCAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTA 25174
|||||||| | || || || || || || | ||||||| || ||| ||| ||||||
Sbjct 145250 TCAACAGCGTCTAATATTCGCTGGAAAGCAGCTCGAAGATGGCCGAACTTTGGCCGATTA 145309
Query 25175 CAATATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGG 25225
||||||||| || || ||| || ||| | || || | || |||||||
Sbjct 145310 CAATATTCAGAAGGAGAGCACCCTCCATCTTGTCCTCCGTCTCCGAGGAGG 145360
Score = 86.0 bits (94), Expect = 5e-12
Identities = 150/216 (69%), Gaps = 8/216 (4%)
Strand=Plus/Plus
Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058
||||| || ||||| ||||| | || || || ||||||| | || || ||| |||
Sbjct 16430012 ATGCAGATCTTTGTGAAGACCCTCACTGGAAAGACCATCACTTTGGAGGTTGAGAGCTCT 16430071
Query 25059 GACACTATCGA----GTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGA 25114
|| || || || |||| | || || | || ||||| ||||| ||||| || ||
Sbjct 16430072 GATACCATTGATAATGTCA---AGGCCAAGATACAG-GACAAGGAAGGCATTCCCCCAGA 16430127
Query 25115 CCAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTA 25174
||| ||| || | || ||||||||||| || | || |||| ||||| | | || ||
Sbjct 16430128 CCAGCAGAGGTTGATCTTTGCCGGCAAGCAGCTCGAGGATGGCCGCACCCTTGCTGACTA 16430187
Query 25175 CAATATTCAAAAAGAATCCACGCTACATTTAGTGCT 25210
||| || || || || ||||| || || || |||||
Sbjct 16430188 CAACATCCAGAAGGAGTCCACCCTCCACTTGGTGCT 16430223
>seq7
Length=15101417
Score = 116 bits (128), Expect = 3e-21
Identities = 153/212 (72%), Gaps = 0/212 (0%)
Strand=Plus/Minus
Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058
||||| || || || ||||||||||| || || |||| || | || || ||| |||
Sbjct 1458664 ATGCAGATTTTCGTGAAGACTTTGACTGGGAAGACCATTACCTTGGAGGTAGAGAGCTCT 1458605
Query 25059 GACACTATCGAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAA 25118
||||| ||||| | ||| ||||||| |||||||| || || || || || |||
Sbjct 1458604 GACACCATCGATAATGTCAAGGCAAAAATCCAGGACAAAGAGGGCATCCCCCCAGATCAA 1458545
Query 25119 CAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAAT 25178
||| || |||| ||||| ||||| || |||| |||| |||||| ||| || |||||
Sbjct 1458544 CAGAGGCTTATCTTTGCTGGCAAGCAGCTAGAGGATGGGCGCACTCTGGCTGACTACAAC 1458485
Query 25179 ATTCAAAAAGAATCCACGCTACATTTAGTGCT 25210
|| || || || || || || || || |||||
Sbjct 1458484 ATCCAGAAGGAGTCTACTCTTCACTTGGTGCT 1458453
Score = 102 bits (112), Expect = 7e-17
Identities = 152/214 (71%), Gaps = 4/214 (2%)
Strand=Plus/Minus
Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058
||||| || ||||| ||||| | || || || |||| || | ||||| ||| ||
Sbjct 1458208 ATGCAGATCTTTGTGAAGACCCTCACTGGGAAGACCATAACCTTGGAAGTTGAGAGCTCG 1458149
Query 25059 GACACTATCGAGTCACTG--AAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACC 25116
||||| || || || || ||| |||||| ||||| || ||||||||||| ||||
Sbjct 1458148 GACACAATTGA--CAATGTTAAGGCCAAAATCCAGGACAAGGAGGGGATTCCACCAGACC 1458091
Query 25117 AACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACA 25176
| ||| || | || |||||||| || || | ||||||| | || ||| |||||||
Sbjct 1458090 AGCAGAGGTTGATCTTTGCCGGGAAGCAGCTTGAAGATGGAAGGACCTTGGCTGATTACA 1458031
Query 25177 ATATTCAAAAAGAATCCACGCTACATTTAGTGCT 25210
|||| || || || ||||| || || | |||||
Sbjct 1458030 ATATCCAGAAGGAGTCCACTCTGCACCTCGTGCT 1457997
>seq6
Length=26894541
Score = 116 bits (128), Expect = 3e-21
Identities = 155/213 (73%), Gaps = 2/213 (1%)
Strand=Plus/Plus
Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058
||||| || ||||| |||||| | || || || ||||||| | ||||| ||| |||
Sbjct 10380878 ATGCAGATCTTTGTCAAGACTCTCACAGGGAAGACCATCACTCTTGAAGTTGAGAGCTCT 10380937
Query 25059 GACACTATCGAGTCACTGAA-GCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCA 25117
|| || || || |||| || || | ||| || || ||||| |||||||| |||||
Sbjct 10380938 GATACGATAGACAACGTGAAAGCCAAGATTCAG-GATAAGGAAGGTATTCCACCGGACCA 10380996
Query 25118 ACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAA 25177
||| || |||| ||||| || || |||||||| |||| | ||| | | ||||||||
Sbjct 10380997 GCAGAGGCTTATATTTGCTGGGAAGCAATTAGAGGATGGGAGGACTCTTGCGGATTACAA 10381056
Query 25178 TATTCAAAAAGAATCCACGCTACATTTAGTGCT 25210
|||||| || || || || || ||| | |||||
Sbjct 10381057 TATTCAGAAGGAGTCTACTCTCCATCTCGTGCT 10381089
Score = 109 bits (120), Expect = 5e-19
Identities = 157/219 (72%), Gaps = 2/219 (1%)
Strand=Plus/Plus
Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058
|||||||| || || || || | ||||| ||| |||| || | ||||| ||| ||
Sbjct 10380422 ATGCAAATCTTCGTCAAAACCCTAACCGGCAAAACCATAACTCTTGAAGTCGAGAGTTCC 10380481
Query 25059 GACACTATCGAGTCACTGAAG-CAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCA 25117
|| ||||| || | ||| | || | ||| ||||||||||| || || || || ||
Sbjct 10380482 GATACTATTGACAACGTAAAGGCCAAGATTCAA-GACAAAGAAGGTATCCCTCCGGATCA 10380540
Query 25118 ACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAA 25177
|||| || | |||||||| || ||||||||||| |||| | | || | | ||||| ||
Sbjct 10380541 ACAGAGGCTAATTTTTGCTGGGAAACAATTAGAGGATGGTAGGACCCTTGCGGATTATAA 10380600
Query 25178 TATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCT 25216
||| ||||| || ||||| || || | || || |||||
Sbjct 10380601 TATCCAAAAGGAGTCCACCCTTCACCTTGTCCTCAGGCT 10380639
Score = 102 bits (112), Expect = 7e-17
Identities = 157/222 (71%), Gaps = 8/222 (4%)
Strand=Plus/Plus
Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058
||||| || || || || || |||| || ||| |||| || | ||||| ||| |||
Sbjct 10380194 ATGCAGATCTTCGTGAAAACCCTGACAGGCAAAACCATAACTCTTGAAGTCGAGAATTCT 10380253
Query 25059 GACACTATCGA----GTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGA 25114
|| || ||||| |||| ||| |||| || ||||||||||| || || |||||
Sbjct 10380254 GATACAATCGACAACGTCA---AAGTCAAAATCCAA-GACAAAGAAGGTATCCCTCCTGA 10380309
Query 25115 CCAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTA 25174
|| || || | ||||| || ||||||||| | || || | || || | | ||||||
Sbjct 10380310 TCAGCAACGCCTGATTTTCGCTGGCAAACAACTCGAGGACGGCCGTACCCTTGCCGATTA 10380369
Query 25175 CAATATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCT 25216
||| || ||||| |||||||| || || | || || |||||
Sbjct 10380370 CAACATCCAAAAGGAATCCACACTCCACCTTGTTCTGAGGCT 10380411
Score = 93.3 bits (102), Expect = 4e-14
Identities = 151/214 (71%), Gaps = 4/214 (2%)
Strand=Plus/Plus
Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058
|||||||| || || |||||||| || || || | ||||| | || || || |||
Sbjct 10380650 ATGCAAATCTTCGTTAAGACTTTAACTGGAAATACAATCACGCTTGAGGTTGAAAGCTCT 10380709
Query 25059 GACACTATCGAGTCAC--TGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACC 25116
|| || || || | || | |||| || | ||| ||||| ||||||||||| || || |
Sbjct 10380710 GATACAATTGA-TAACGTTAAAGCCAAGATTCAG-GACAAGGAAGGGATTCCCCCGGATC 10380767
Query 25117 AACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACA 25176
| ||| || | || ||||| || || || || ||||||| | ||| | | ||||| |
Sbjct 10380768 AGCAGAGGCTCATCTTTGCAGGGAAGCAGTTGGAAGATGGGAGGACTCTTGCAGATTATA 10380827
Query 25177 ATATTCAAAAAGAATCCACGCTACATTTAGTGCT 25210
| |||||||| || || || || ||| | || ||
Sbjct 10380828 ACATTCAAAAGGAGTCTACTCTGCATCTGGTACT 10380861
>seq14
Length=17716633
Score = 111 bits (122), Expect = 1e-19
Identities = 165/231 (71%), Gaps = 6/231 (3%)
Strand=Plus/Minus
Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058
||||| || || || ||||| ||||| || || |||| || |||| || ||||| ||
Sbjct 8229132 ATGCAGATCTTCGTGAAGACCTTGACGGGAAAGACCATAACCCTCGAGGTTGAGTCATCA 8229073
Query 25059 GACACTATCGAGTCACTG---AAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGAC 25115
||||| ||||| || || |||| || | ||| ||||| || || || || || |||
Sbjct 8229072 GACACAATCGA--CAATGTCAAAGCCAAGATTCAG-GACAAGGAGGGCATCCCTCCAGAC 8229016
Query 25116 CAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTAC 25175
|||||||| | ||||| || || |||||| | || || | |||||| | | || |||
Sbjct 8229015 CAACAGCGTCTCATTTTCGCTGGGAAACAACTCGAGGACGGTCGCACCCTCGCTGACTAC 8228956
Query 25176 AATATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGGA 25226
|| || || || || ||||| || || || ||||| | || || || |||
Sbjct 8228955 AACATCCAGAAGGAGTCCACTCTCCACTTGGTGCTTCGCCTGAGGGGTGGA 8228905
>seq2
Length=23562801
Score = 100 bits (110), Expect = 2e-16
Identities = 153/215 (71%), Gaps = 6/215 (3%)
Strand=Plus/Minus
Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058
||||| || || || || || ||||| ||||| | || || |||| || ||||| ||
Sbjct 14983047 ATGCAGATCTTCGTGAAAACCTTGACGGGTAAGACAATAACCCTCGAGGTTGAGTCCTCA 14982988
Query 25059 GACACTATCGAGTCACTG---AAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGAC 25115
||||| ||||| || || |||| || | ||| ||||| || || || ||||| |||
Sbjct 14982987 GACACGATCGA--CAATGTCAAAGCCAAGATTCAA-GACAAGGAGGGCATCCCACCAGAC 14982931
Query 25116 CAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTAC 25175
|||||||| | ||||| || || ||||| | || |||| ||||| | | || |||
Sbjct 14982930 CAACAGCGTCTCATTTTCGCTGGAAAACAGCTCGAGGATGGCCGCACGCTCGCTGACTAC 14982871
Query 25176 AATATTCAAAAAGAATCCACGCTACATTTAGTGCT 25210
|| || || || || ||||| || || || || ||
Sbjct 14982870 AACATCCAGAAGGAGTCCACTCTCCACTTGGTTCT 14982836
Score = 96.9 bits (106), Expect = 3e-15
Identities = 103/136 (76%), Gaps = 0/136 (0%)
Strand=Plus/Minus
Query 25092 GACAAAGAAGGGATTCCACCTGACCAACAGCGGATTATTTTTGCCGGCAAACAATTAGAA 25151
||||| ||||| || || ||||| || || | | |||||||| || ||||||||||||
Sbjct 4215783 GACAAGGAAGGCATCCCTCCTGATCAGCAAAGATTGATTTTTGCTGGTAAACAATTAGAA 4215724
Query 25152 GATGATCGCACTGTGGGCGATTACAATATTCAAAAAGAATCCACGCTACATTTAGTGCTA 25211
|||| || ||| | | ||||||||||| || || || || ||||| || || || |
Sbjct 4215723 GATGGGCGAACTCTTGCTGATTACAATATCCAGAAGGAGTCGACGCTTCACTTGGTTTTG 4215664
Query 25212 AGGCTAAGAGGAGGAA 25227
||||| || |||||||
Sbjct 4215663 AGGCTCAGGGGAGGAA 4215648
>seq4
Length=23188140
Score = 98.7 bits (108), Expect = 9e-16
Identities = 140/195 (72%), Gaps = 8/195 (4%)
Strand=Plus/Minus
Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058
||||| || || || || ||||||||||| || | || || | || ||||||
Sbjct 1307538 ATGCAGATCTTCGTGAAAACTTTGACCGGCAAGACTATAACCCTTGAGGTGGAGAGCAGC 1307479
Query 25059 GACACTATCGA----GTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGA 25114
||||| ||||| |||| |||| || | ||| ||||| || || || ||||| ||
Sbjct 1307478 GACACCATCGACAACGTCA---AAGCCAAGATTCAA-GACAAGGAGGGCATCCCACCGGA 1307423
Query 25115 CCAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTA 25174
||||| || | || || ||||| ||||| | ||||||| ||| ||| ||| ||||||
Sbjct 1307422 TCAACAACGTTTGATCTTCGCCGGGAAACAGCTCGAAGATGGTCGGACTTTGGCCGATTA 1307363
Query 25175 CAATATTCAAAAAGA 25189
||||||||| || ||
Sbjct 1307362 CAATATTCAGAAGGA 1307348
>seq12
Length=14929429
Score = 91.5 bits (100), Expect = 1e-13
Identities = 151/215 (70%), Gaps = 6/215 (3%)
Strand=Plus/Minus
Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058
||||| || || || || || ||||| || || | || || |||| || || || ||
Sbjct 11925963 ATGCAGATCTTCGTGAAAACCTTGACGGGCAAGACAATAACCCTCGAGGTAGAATCCTCA 11925904
Query 25059 GACACTATCGAGTCACTG---AAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGAC 25115
|| || ||||| || || |||| || | ||| ||||| ||||| || ||||| |||
Sbjct 11925903 GATACAATCGA--CAATGTCAAAGCCAAGATTCAA-GACAAGGAAGGTATCCCACCAGAC 11925847
Query 25116 CAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTAC 25175
|||||||| | ||||| || || ||||| | || || | ||||| | | || |||
Sbjct 11925846 CAACAGCGTCTCATTTTCGCTGGAAAACAGCTCGAGGACGGCCGCACACTCGCTGACTAC 11925787
Query 25176 AATATTCAAAAAGAATCCACGCTACATTTAGTGCT 25210
|| || || || || ||||| || || || |||||
Sbjct 11925786 AACATCCAGAAGGAGTCCACTCTCCACTTGGTGCT 11925752
>seq5
Length=25802683
Score = 87.8 bits (96), Expect = 2e-12
Identities = 101/136 (74%), Gaps = 0/136 (0%)
Strand=Plus/Plus
Query 25092 GACAAAGAAGGGATTCCACCTGACCAACAGCGGATTATTTTTGCCGGCAAACAATTAGAA 25151
||||| ||||| || || ||||| || || | | |||||||| || ||||||||||||
Sbjct 21066238 GACAAGGAAGGCATCCCTCCTGATCAGCAAAGATTGATTTTTGCTGGTAAACAATTAGAA 21066297
Query 25152 GATGATCGCACTGTGGGCGATTACAATATTCAAAAAGAATCCACGCTACATTTAGTGCTA 25211
|||| || ||| | | |||||||| || || || || ||||| || || | || |
Sbjct 21066298 GATGGACGTACTCTTGCTGATTACAACATCCAGAAGGAGTCCACTCTTCACCTGGTTTTG 21066357
Query 25212 AGGCTAAGAGGAGGAA 25227
||||| || |||||||
Sbjct 21066358 AGGCTTAGGGGAGGAA 21066373
>seq15
Length=15134944
Score = 82.4 bits (90), Expect = 7e-11
Identities = 135/192 (70%), Gaps = 6/192 (3%)
Strand=Plus/Minus
Query 24998 AATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTC 25057
|||||| || ||||| || || |||| || || ||||||| | || || || ||
Sbjct 556026 AATGCAGATCTTTGTGAAAACCCTGACTGGCAAGACCATCACTCTTGAGGTCGAATCTAG 555967
Query 25058 TGACACTATCGAGTCACTG---AAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGA 25114
||| ||||| || || || |||| |||| || ||||| ||||||||||| |||||
Sbjct 555966 TGATACTATTGA--CAATGTCAAAGCCAAAATCCAG-GACAAGGAAGGGATTCCTCCTGA 555910
Query 25115 CCAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTA 25174
|| ||| | | || ||||| || || || | ||||||| || || | | |||||
Sbjct 555909 TCAGCAGAGACTGATCTTTGCTGGGAAGCAGCTGGAAGATGGCCGTACCCTTGCTGATTA 555850
Query 25175 CAATATTCAAAA 25186
|||||| || ||
Sbjct 555849 CAATATCCAGAA 555838
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 433314723100910
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |