Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Populus_20trichocarpa_20[refseq_20GCF_5F000002775.3_202013-10-18] 2,514 sequences; 417,286,671 total letters Query= NC_023587.1 Length=189311 Score E Sequences producing significant alignments: (Bits) Value seq2514 574 6e-159 seq13 132 6e-26 seq19 114 2e-20 seq4 105 8e-18 seq1 98.7 1e-15 seq9 95.1 1e-14 seq1667 91.5 2e-13 seq3 89.7 6e-13 seq8 82.4 9e-11 >seq2514 Length=157033 Score = 574 bits (636), Expect = 6e-159 Identities = 732/1007 (73%), Gaps = 8/1007 (1%) Strand=Plus/Plus Query 178949 TGGATGACTGGCTTAATCGGGATCGCTTTGTCTTTGTGGGTTGGTCTGGACTCCTACTTC 179008 ||||||||||| | |||| || || || |||||||||||||| || || | || Sbjct 32830 TGGATGACTGGTTACGGAGGGACCGTTTCGTTTTTGTGGGTTGGTCCGGTCTATTGCTCT 32889 Query 179009 TTCCCACTGCTTATCTTGCCATTGGCGGTTGGCTTACTGGGACAGCTTTTGTTACGAGTT 179068 |||| ||| ||| ||||| | || |||||| | || || ||| | ||||| || | Sbjct 32890 TTCCTTGTGCCTATTTTGCCTTAGGGGGTTGGTTCACAGGTACAACCTTTGTAACCTCAT 32949 Query 179069 GGTACACCCATGGTCTTGCTAGTTCCTATCTTGAAGGTGCTAACTTTCTTACGGCAGCTG 179128 |||| |||||||| | || ||||||||| | |||||| ||||| | || || || | Sbjct 32950 GGTATACCCATGGATTGGCCAGTTCCTATTTGGAAGGTTGCAACTTCTTAACCGCCGCAG 33009 Query 179129 TCTCGACGCCTGCTGATGCTATGGGTCATTCTCTTCTTCTACTTTGGGGTCCTGAGTCTC 179188 | || || |||||| || | | | |||||| | | |||| ||||||||||| | | Sbjct 33010 TTTCTACTCCTGCTAATAGTTTAGCCCATTCTTTATTATTACTATGGGGTCCTGAAGCAC 33069 Query 179189 AGGGGAATTTCCAGCGGTGGTGCCAACTTGGGGGACTATGGAATTTCGTGGCTCTCCACG 179248 | || |||| || ||||| ||| | || || | |||| ||| || |||||||||| Sbjct 33070 AAGGAGATTTTACTCGTTGGTGTCAATTAGGTGGCTTGTGGACTTTTGTTGCTCTCCACG 33129 Query 179249 GTGCCTTCGCCCTAATTGGATTCATGCTTCGTCAGTTTGAACTGGCACGTCTCATCGGTA 179308 | || |||| ||||| || || ||| | ||||| |||||||| || || ||| || Sbjct 33130 GAGCTTTCGGACTAATAGGTTTTATGTTACGTCAATTTGAACTTGCTCG----ATCCGTG 33185 Query 179309 ----TCCGTCCTTACAATGCGATTGCTTTTACTGGTCCTATTGCCGTATTCGTTAGTGTA 179364 | || ||||| ||||| || || || ||||||| ||||| || || ||| |||| Sbjct 33186 CAATTACGACCTTATAATGCAATCGCATTCTCTGGTCCAATTGCGGTTTTTGTTTCTGTA 33245 Query 179365 TTTCTCATCTACCCACTTGGACAATCCAGTTGGTTCTTTGCGCCATCGTTTGGTGTTGCG 179424 || || || || ||||| || || || |||||||||||||||| ||||| || || Sbjct 33246 TTCCTGATTTATCCACTAGGTCAGTCTGGTTGGTTCTTTGCGCCTAGTTTTGGCGTAGCA 33305 Query 179425 GCGATCTTTAGATTCCTACTTTTCTTACAAGGTTTCCACAACTGGACACTCAACCCCTTT 179484 || || ||| ||||| | || || || ||||| || || || |||||||| ||||| ||| Sbjct 33306 GCTATATTTCGATTCATCCTCTTTTTCCAAGGATTTCATAATTGGACACTGAACCCATTT 33365 Query 179485 CACATGATGGGAGTTGCAGGTATCCTGGGTGGTGCTCTGCTCTCTGCTATTCATGGAGTA 179544 || |||||||||||||| ||| | |||| | ||||||||| | ||||||||||| | Sbjct 33366 CATATGATGGGAGTTGCCGGTGTATTGGGCGCTGCTCTGCTATGCGCTATTCATGGTGCT 33425 Query 179545 ACTGTAGAGAATACATTGTATGAAGATGGAGAACAAGCAAACACATTTAAAGCGTTCGAC 179604 |||||||| ||||| || | ||||||||| || ||||| ||||| || || || Sbjct 33426 ACTGTAGAAAATACTTTATTTGAAGATGGTGATGGTGCAAATACATTCCGTGCTTTTAAC 33485 Query 179605 TCTACGCAAGAGGAGGAGACCTATTCTATGGTTACAGCGAACCGTTTTTGGTCGCAGATC 179664 | || |||| || || || ||||| ||||| || || ||||| |||||||| || || Sbjct 33486 CCAACTCAAGCTGAAGAAACTTATTCCATGGTCACCGCCAACCGCTTTTGGTCCCAAATT 33545 Query 179665 TTCGGGGTTCCGTTTAGCAATAAGCGTTGGTTCCACTTCTTTAAGCTGTTTGTTCCTGTC 179724 || |||||| | ||| |||||| |||||||| || ||||||| | | ||||| || || Sbjct 33546 TTTGGGGTTGCTTTTTCCAATAAACGTTGGTTACATTTCTTTATGTTATTTGTACCAGTA 33605 Query 179725 ATGGGTCTTTGGGTCTCTTCTATTGGCATCATTGGGCTAGCTCTTAATCTTCGTGCTTAT 179784 | ||| | ||| | | || |||| | |||| || ||||| || || ||||| ||| Sbjct 33606 ACCGGTTTATGGATGAGTGCTCTTGGAGTAGTTGGTCTGGCTCTGAACCTACGTGCCTAT 33665 Query 179785 GATTTTGTGAGTCAAGAGATCAGAGCAGCAGAAGATCCTGAGTTCGAGACGTTCTATACA 179844 || || || ||| || ||| | ||||| ||||||||||| || ||||| |||||||| Sbjct 33666 GACTTCGTTTCTCAGGAAATCCGTGCAGCGGAAGATCCTGAATTTGAGACTTTCTATACC 33725 Query 179845 AAGAACATTCTTCTGAATGAAGGACTACGTGCTTGGTTGGCACCTGCTGATCAACCACAT 179904 || || |||||| | |||||||| | ||||||||| |||| || ||||| || ||| Sbjct 33726 AAAAATATTCTTTTAAATGAAGGCATTCGTGCTTGGATGGCGGCTCAAGATCAGCCTCAT 33785 Query 179905 GAAAACTTCATCTTCCCAGAAGAAGTCCTACCTAGTGGTAACGCACT 179951 |||||| | || ||||| || || || ||||| |||| ||||| || Sbjct 33786 GAAAACCTTATATTCCCTGAGGAGGTTCTACCCCGTGGAAACGCTCT 33832 Score = 554 bits (614), Expect = 5e-153 Identities = 704/962 (73%), Gaps = 5/962 (1%) Strand=Plus/Minus Query 177585 AACCGCCTCTATGTCGGTTGGTTCGGCGTACTGATGATTCCAACTCTGTTGGCAGCAACT 177644 ||||| || ||| | || ||||| || || |||||||||| ||| | ||| | |||||| Sbjct 1304 AACCGTCTTTATATTGGATGGTTTGGTGTTTTGATGATTCCTACTTTATTGACCGCAACT 1245 Query 177645 ATCTGC-TTCATCGTCGCCTTCGTCGCTGCTCCCCCCGTGGACATCGACGGCATCCGTGA 177703 |||| || || |||| ||| | ||||| || || || ||||| || || || ||||| Sbjct 1244 -TCTGTATTTATTATCGCTTTCATTGCTGCCCCTCCAGTAGACATTGATGGTATTCGTGA 1186 Query 177704 ACCCGTCGCTGGTTCACTCATGTATGGTAACAACATCATCTCTGGTGCAGTTGTACCATC 177763 ||| || |||| || || | ||||| ||||| ||||| |||||||| || | || | Sbjct 1185 ACCTGTTTCTGGATCTCTACTTTATGGAAACAATATCATTTCTGGTGCCATTATTCCTAC 1126 Query 177764 TTCCAACGCAATTGGTCTTCACTTCTATCCCATCTGGGAAGCCGCATCACTTGATGAGTG 177823 ||| || || || | ||||| || || || |||||||| ||||| ||||||| || Sbjct 1125 TTCTGCGGCTATAGGGTTGCACTTTTACCCAATATGGGAAGCGGCATCCGTTGATGAATG 1066 Query 177824 GCTGTATAACGGTGGTCCTTTCCAACTCGTAGTCTTTCACTTCCTTATCGGCATCTATGC 177883 | | || ||||| ||||||| | || | || | |||||| | | || | | Sbjct 1065 GTTATACAACGGCGGTCCTTATGAGCTAATTGTTCTACACTTCTTACTTGGTGTAGCTTG 1006 Query 177884 ATATATGGGACGTGAGTGGGAACTTTCATACCGTCTAGGTATGCGCCCCTGGATCTGTGT 177943 || ||||| ||||||||||||||| | |||||| |||||||| || ||||| ||| Sbjct 1005 TTACATGGGGCGTGAGTGGGAACTTAGTTTCCGTCTGGGTATGCGTCCTTGGATTGCTGT 946 Query 177944 TGCATACTCTGCACCTGTTGCAGCAGCATCCGCAGTCTTTCTAG-TCTATCCTTTCGGTC 178002 |||||| || || |||||||| || || | || || ||||| | | ||||| |||||| Sbjct 945 TGCATATTCAGCTCCTGTTGCGGCGGCTACTGCTGT-TTTCTTGATTTATCCAATCGGTC 887 Query 178003 AAGGTTCATTCTCCGATGCTATGCCTCTTGGTATCTCTGGTACTTTTAACTACATGCTTG 178062 |||| || || |||| |||||||| || ||||||||||||||||||| ||| ||| Sbjct 886 AAGGAAGTTTTTCGGATGGGATGCCTCTAGGAATCTCTGGTACTTTTAACTTTATGATTG 827 Query 178063 TATTCCAAGCAGAACACAATATCCTTATGCACCCGTTCCACATGCTCGGTGTTGCTGGGG 178122 ||||||| || || ||||| |||||||||||||| || |||||| | || || ||||| | Sbjct 826 TATTCCAGGCTGAGCACAACATCCTTATGCACCCATTTCACATGTTAGGCGTAGCTGGTG 767 Query 178123 TATTCGGTGGATCTCTTTTCTCTGCTATGCATGGAAGTCTCGTTACTTCTTCGCTCGTCC 178182 ||||||| || || || ||| |||||||||||| | | || || ||| | || Sbjct 766 TATTCGGCGGCTCCCTATTCAGTGCTATGCATGGTTCTTTGGTAACCTCTAGTTTGATCA 707 Query 178183 GTGAGACGACAGAAACTGAGTCCCAGAACTATGGTTACAAGTTCGGACAAGAAGAAGAAA 178242 | || || ||||||| ||| || || | ||||||| || || ||||| ||||||| Sbjct 706 GGGAAACCACAGAAAATGAATCTGCTAATGAAGGTTACAGATTTGGTCAAGAGGAAGAAA 647 Query 178243 CATATAACATCGTCGCAGCCCATGGTTACTTCGGTCGTTTGATCTTCCAATATGCATCGT 178302 | ||||| ||||| || || |||||||| || || || ||||||||||||||||| | Sbjct 646 CTTATAATATCGTAGCCGCTCATGGTTATTTTGGCCGATTGATCTTCCAATATGCTAGTT 587 Query 178303 TCAACAACTCCCGTTCACTGCACTTCTTCCTCGCAGCATGGCCTGTAGTTGGAATCTGGT 178362 | |||||||| ||||| | || |||||| | || || ||||||||||| || ||||||| Sbjct 586 TTAACAACTCTCGTTCTTTACATTTCTTCTTAGCTGCTTGGCCTGTAGTAGGTATCTGGT 527 Query 178363 TCACCGCACTTGGTGTATCCACCATGGCATTTAACCTCAATGGATTCAACTTCAACCAGT 178422 |||| || | ||| | ||| ||||| || || || ||||| ||||| |||||||| | Sbjct 526 TCACTGCTTTAGGTATTAGCACTATGGCTTTCAATCTAAATGGTTTCAATTTCAACCAAT 467 Query 178423 CCATCCTCGACGGACAAGGACGTGTCCTCAACACATGGGCAGACGTGCTCAACCGTGCCG 178482 | | | || | ||||| ||||| | || || ||||| || | | |||||||| Sbjct 466 CTGTAGTTGATAGTCAAGGTCGTGTAATTAATACCTGGGCTGATATTATTAACCGTGCTA 407 Query 178483 GTCTCGGCATGGAAGTCATGCACGAAAGAAATAGCACATAACTTCCCGCTTGATCTTGCA 178542 || || |||||||| ||||| ||| | ||| || ||||| ||||| || || || || Sbjct 406 ACCTTGGTATGGAAGTTATGCATGAACGTAAT-GCTCATAATTTCCCTCTAGACCTAGCT 348 Query 178543 GC 178544 || Sbjct 347 GC 346 >seq13 Length=15658869 Score = 132 bits (146), Expect = 6e-26 Identities = 243/356 (68%), Gaps = 0/356 (0%) Strand=Plus/Plus Query 178011 TTCTCCGATGCTATGCCTCTTGGTATCTCTGGTACTTTTAACTACATGCTTGTATTCCAA 178070 || || |||| ||||||| || || | |||||||||||||| ||| |||||||| || Sbjct 4833148 TTTTCAGATGGGGTGCCTCTAGGAATATTTGGTACTTTTAACTTTATGATTGTATTCTAA 4833207 Query 178071 GCAGAACACAATATCCTTATGCACCCGTTCCACATGCTCGGTGTTGCTGGGGTATTCGGT 178130 || || || | |||||||| |||| || |||||| | || || | || ||| | | Sbjct 4833208 GCTGAGCATTACATCCTTATAGACCCATTTCACATGTTAGGCGTAACAGGTTTATGCAAT 4833267 Query 178131 GGATCTCTTTTCTCTGCTATGCATGGAAGTCTCGTTACTTCTTCGCTCGTCCGTGAGACG 178190 | || | | | || ||||||||| | | || || ||| | || || || Sbjct 4833268 GACTCCTTATCCAATGTTATGCATGGTTTTTTGGTAACCTCTAATTTGATCAAGGAAACC 4833327 Query 178191 ACAGAAACTGAGTCCCAGAACTATGGTTACAAGTTCGGACAAGAAGAAGAAACATATAAC 178250 | | ||| ||| ||| || | ||||||| || || ||| | |||||||| ||| || Sbjct 4833328 AAATAAAATGAATCCACTAATGAAGGTTACAGATTTGGTCAAAAGGAAGAAACTTATGAC 4833387 Query 178251 ATCGTCGCAGCCCATGGTTACTTCGGTCGTTTGATCTTCCAATATGCATCGTTCAACAAC 178310 ||||| | || ||||||| || || | ||||||| ||||||| || |||| | Sbjct 4833388 ATCGTAGTTGCTCATGGTTCTTTTGGCTGACCGATCTTCTAATATGCTAGTTTTAACAGC 4833447 Query 178311 TCCCGTTCACTGCACTTCTTCCTCGCAGCATGGCCTGTAGTTGGAATCTGGTTCAC 178366 || | ||| | || |||||| | | | |||||| || | || ||||||||||| Sbjct 4833448 TCTCATTCTTTACATTTCTTCTTAGGTTCTTGGCCTATAATAGGTATCTGGTTCAC 4833503 >seq19 Length=16008726 Score = 114 bits (126), Expect = 2e-20 Identities = 115/148 (78%), Gaps = 1/148 (1%) Strand=Plus/Minus Query 179425 GCGATCTTTAGATTCCTACTTTTCTTACAAGGTTTCCACAACTGGACACTCAACCCCTTT 179484 || || ||| ||||| | || || || ||||| || || || |||||||| ||| | ||| Sbjct 8026091 GCTATATTTTGATTCATCCTCTTTTTCCAAGGATTTCATAATTGGACACTGAACGCATTT 8026032 Query 179485 CACATGATGGGAGTTGCAGGTATCCTGGGTGGTGCTCTGCTCTCTGCTATTCATGGAGTA 179544 || |||| ||||||||| ||| | |||| | ||||||| | | |||||||||||| | Sbjct 8026031 CATATGACGGGAGTTGCCGGTGTATTGGGCGTTGCTCTGTTATGTGCTATTCATGGTGCT 8025972 Query 179545 ACTGTAGAGAATACATTGTATGAAGATG 179572 |||||||| ||||| || | |||||||| Sbjct 8025971 ACTGTAGAAAATACTTTAT-TGAAGATG 8025945 >seq4 Length=23188140 Score = 105 bits (116), Expect = 8e-18 Identities = 182/262 (69%), Gaps = 2/262 (1%) Strand=Plus/Minus Query 138502 GGCGAAGAACAAATCTTTGACTGTGCTGATGATCAGTACATCCTTGATGCTGCTGATGAA 138561 |||||||| || ||||| | | ||||| |||||||| ||||| || || | Sbjct 20462787 GGCGAAGAGCATGAATTTGAAGCTCCAGATGACACATACATCCTAGATGCAGCCGAGAAT 20462728 Query 138562 GCAGGTATTGATCTTCCCTACTCCTGTCGTGCTGGTGCATGTTCTACCTGTGCTGGTAAA 138621 ||||| |||| || || || || || | ||||| || |||| |||||||||||| || Sbjct 20462727 GCAGGAGTTGAGCTGCCTTATTCTTGCAGGGCTGGGGCTTGTTGTACCTGTGCTGGGAAG 20462668 Query 138622 TTAGTTGAAGGAACTGTAGATCAGTCTGACCAGTCTTTCCTTGATGATGACCAAATTGCA 138681 | | ||| |||| || |||||||| ||||||||||| || || |||| || | Sbjct 20462667 GTGGCATCAGGTTCTGTCGACCAGTCTGATGGTTCTTTCCTTGACGAGGATCAAA-TGAA 20462609 Query 138682 GCA-GGATTTATCATGACTTGCGTAGCATACCCCACATCCGATTGTATAATTGAAACTGA 138740 | | || | | | |||||||||| | ||||| || || |||||| | ||| | ||| | Sbjct 20462608 GGACGGTTATCTTCTGACTTGCGTTTCCTACCCAACTTCAGATTGTGTGATTCACACTCA 20462549 Query 138741 AAAAGAGGACGAACTATACTGA 138762 || || | || || | |||| Sbjct 20462548 CAAGGAAGGTGACCTTTGCTGA 20462527 Score = 84.2 bits (92), Expect = 3e-11 Identities = 152/220 (69%), Gaps = 7/220 (3%) Strand=Plus/Plus Query 138538 TACATCCTTGATGCTGCTGATGAAGCAGGT---ATTGATCTTCCCTACTCCTGTCGTGCT 138594 ||||||||||| |||||| || |||| ||||| || |||||||| || | ||| Sbjct 21677418 TACATCCTTGACCATGCTGAGGAGGCAGAAGAGATTGACCTCCCCTACTCATGCAGGGCT 21677477 Query 138595 GGTGCATGTTCTACCTGTGCTGGTAAATTAGTTGAAGGAACTGTAGATCAGTCTGA--CC 138652 || |||| ||| | ||| ||| || | || | || ||||| ||||||||||| | Sbjct 21677478 GGCTCATGCTCTTCATGTCTTGGCAAGATTGTGAAGGGGACTGTGGATCAGTCTGATGCT 21677537 Query 138653 AGTCTTTCCTTGATGATGACCAAATTGCAGCAGGATTTATCATGACTTGCGTAGCATACC 138712 || ||||||||||||||||| || | | ||| | | | || || || || || | Sbjct 21677538 AG--CTTCCTTGATGATGACCAGATAGAGGAAGGCTGGGTTCTCACCTGTGTTGCTTATC 21677595 Query 138713 CCACATCCGATTGTATAATTGAAACTGAAAAAGAGGACGA 138752 | || || ||| | | || || || | |||||||| || Sbjct 21677596 CTACGTCTGATGTTGTCATCGAGACACACAAAGAGGAAGA 21677635 >seq1 Length=48367220 Score = 98.7 bits (108), Expect = 1e-15 Identities = 121/162 (75%), Gaps = 4/162 (2%) Strand=Plus/Minus Query 138518 TTGACTGTGCTGATGATCAGTACATCCTTGATGCTGCTGATGAAGCAGGTATTGATCTTC 138577 |||| || ||||||| ||||||||||| ||||| || | ||||||||| |||| Sbjct 47650805 TTGAATGCTCTGATGAAACCTACATCCTTGACAAGGCTGAAGAGGAAGGTATTGACCTTC 47650746 Query 138578 CCTACTCCTGTCGTGCTGGTGCATGTTCTACCTGTGCTGGTAAATTAGTTGAAGGAACTG 138637 | ||||| || | |||||||| || ||| | |||||||| || | || ||||| | || Sbjct 47650745 CATACTCATGCAGGGCTGGTGCTTGCTCTTCATGTGCTGGGAAGATCGTGGAAGGGATTG 47650686 Query 138638 TAGATCAGTCTGA--CCAGTCTTTCCTTGATGATGACCAAAT 138677 | ||||||||||| | || |||| |||| || ||||| || Sbjct 47650685 TGGATCAGTCTGATGCTAG-CTTT-CTTGGAGAAGACCAGAT 47650646 >seq9 Length=12942059 Score = 95.1 bits (104), Expect = 1e-14 Identities = 168/245 (69%), Gaps = 0/245 (0%) Strand=Plus/Minus Query 138529 GATGATCAGTACATCCTTGATGCTGCTGATGAAGCAGGTATTGATCTTCCCTACTCCTGT 138588 ||||| ||||||||| ||||| ||||| | ||||| ||||| || || || || || Sbjct 12537818 GATGACGTGTACATCCTAGATGCCGCTGAGAATGCAGGAATTGACCTGCCTTATTCTTGC 12537759 Query 138589 CGTGCTGGTGCATGTTCTACCTGTGCTGGTAAATTAGTTGAAGGAACTGTAGATCAGTCT 138648 | ||||| || ||||||||||||||||| || | ||| |||| || |||||| Sbjct 12537758 AGGGCTGGGGCTTGTTCTACCTGTGCTGGGAAGGCGGCATCAGGTTCTGTCGACCAGTCT 12537699 Query 138649 GACCAGTCTTTCCTTGATGATGACCAAATTGCAGCAGGATTTATCATGACTTGCGTAGCA 138708 || || ||||| ||||| | ||||| | | || | | | | |||||| | | Sbjct 12537698 GATGGTTCATTCCTCGATGAGAATCAAATGGGGGAGGGCTATCTTCTAACTTGCATTTCC 12537639 Query 138709 TACCCCACATCCGATTGTATAATTGAAACTGAAAAAGAGGACGAACTATACTGATGGAGT 138768 || || || || || ||| | ||| | ||| | || || | || || |||||| || | Sbjct 12537638 TATCCAACTTCTGACTGTGTGATTCACACTCACAAGGAAGGTGATCTTTACTGAGGGCTT 12537579 Query 138769 TTACA 138773 || || Sbjct 12537578 TTGCA 12537574 >seq1667 Length=4831 Score = 91.5 bits (100), Expect = 2e-13 Identities = 142/200 (71%), Gaps = 6/200 (3%) Strand=Plus/Plus Query 178949 TGGATGACTGGCTTAATCG---GGATCGCTTTGTCTTTGTGGGTTGGTCTGGACTCCTAC 179005 ||||||||||| ||| || ||| || ||||| ||||||||||||||||| || | | Sbjct 2915 TGGATGACTGG-TTA--CGAAAGGACCGTTTTGTTTTTGTGGGTTGGTCTGGTCTATTGC 2971 Query 179006 TTCTTCCCACTGCTTATCTTGCCATTGGCGGTTGGCTTACTGGGACAGCTTTTGTTACGA 179065 | |||| ||| ||| ||||| | || |||||| | || | | | | ||||| || Sbjct 2972 TCTTTCCTTATGCCTATTTTGCCTTAGGGGGTTGGTTCACAGTTATAACCTTTGTAACCT 3031 Query 179066 GTTGGTACACCCATGGTCTTGCTAGTTCCTATCTTGAAGGTGCTAACTTTCTTACGGCAG 179125 ||||| |||||||| | || ||||||||| | ||||| ||||| | || || | Sbjct 3032 CATGGTATACCCATGGATTGGCCAGTTCCTATTTGAAAGGTTGCAACTTCTTAACCGCTG 3091 Query 179126 CTGTCTCGACGCCTGCTGAT 179145 || || || |||||| || Sbjct 3092 TAGTTTCTACTCCTGCTAAT 3111 >seq3 Length=20216275 Score = 89.7 bits (98), Expect = 6e-13 Identities = 151/218 (69%), Gaps = 3/218 (1%) Strand=Plus/Minus Query 138538 TACATCCTTGATGCTGCTGATGAAGCA---GGTATTGATCTTCCCTACTCCTGTCGTGCT 138594 |||||||| || |||||| || || || || || || || ||||| || | ||| Sbjct 955935 TACATCCTCGACCATGCTGAGGAGGCGCATGGAATGGACCTCCCATACTCATGCAGGGCT 955876 Query 138595 GGTGCATGTTCTACCTGTGCTGGTAAATTAGTTGAAGGAACTGTAGATCAGTCTGACCAG 138654 || || || ||| | |||||||| || | || |||| ||||| ||||||||||| Sbjct 955875 GGAGCTTGCTCTTCATGTGCTGGCAAGGTTGTGCAAGGGACTGTGGATCAGTCTGATGGT 955816 Query 138655 TCTTTCCTTGATGATGACCAAATTGCAGCAGGATTTATCATGACTTGCGTAGCATACCCC 138714 ||||||||||| ||||| || || | ||| | | | ||||| || || || || Sbjct 955815 AGCTTCCTTGATGAAGACCAGATAGCGGAAGGTTGGGTTCTCACTTGTGTTGCTTATCCT 955756 Query 138715 ACATCCGATTGTATAATTGAAACTGAAAAAGAGGACGA 138752 || || ||| | | ||||| || | |||||||| || Sbjct 955755 ACGTCTGATGTTGTCATTGAGACACACAAAGAGGAAGA 955718 >seq8 Length=18835763 Score = 82.4 bits (90), Expect = 9e-11 Identities = 162/237 (68%), Gaps = 2/237 (1%) Strand=Plus/Minus Query 138527 CTGATGATCAGTACATCCTTGATGCTGCTGATGAAGCAGGTATTGATCTTCCCTACTCCT 138586 ||| |||| ||||||||||| | ||||| | ||||| | || || || ||||| | Sbjct 1005465 CTGGTGATACTTACATCCTTGACTCAGCTGAAAATGCAGGAGTGGAGCTCCCATACTCAT 1005406 Query 138587 GTCGTGCTGGTGCATGTTCTACCTGTGCTGGTAAATTAGTTGAAGGAACTGTAGATCAGT 138646 | | || || || || ||||| |||||||||| || ||| ||| | ||||| || | Sbjct 1005405 GCAGAGCCGGAGCCTGCTCTACTTGTGCTGGTATGTTGGTTTCAGGGTCCGTAGACCAAT 1005346 Query 138647 CTGACCAGTCTTTCCTTGATGATGACCAAATTGCAGCA-GGATTTATCATGACTTGCGTA 138705 | || || ||||||||||| | || | || || | |||| || | || || || Sbjct 1005345 CAGATGGTTCATTCCTTGATGAGAAACAGA-TGGAGAAGGGATACGTCCTTACCTGTGTC 1005287 Query 138706 GCATACCCCACATCCGATTGTATAATTGAAACTGAAAAAGAGGACGAACTATACTGA 138762 |||| || || || || ||| | ||| | || | || ||||| || || || ||| Sbjct 1005286 TCATATCCAACTTCGGACTGTGTGATTCACACACACAAGGAGGAAGATCTGTATTGA 1005230 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 605648166908240