Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Populus_20trichocarpa_20[refseq_20GCF_5F000002775.3_202013-10-18] 2,514 sequences; 417,286,671 total letters Query= NC_028879.1 Length=43225 Score E Sequences producing significant alignments: (Bits) Value seq2514 80.6 7e-11 >seq2514 Length=157033 Score = 80.6 bits (88), Expect = 7e-11 Identities = 58/67 (87%), Gaps = 0/67 (0%) Strand=Plus/Plus Query 31257 CTGCGCCGGTAGGATTCGAACCTACGAATGCCGGAATCAAAATCCGGTGCCTTACCGCTT 31316 ||| | ||| ||||||||||||| |||||| ||| ||||||| ||| ||||||||||||| Sbjct 5586 CTGGGACGGAAGGATTCGAACCTCCGAATGGCGGGATCAAAACCCGTTGCCTTACCGCTT 5645 Query 31317 GGCGACG 31323 ||| ||| Sbjct 5646 GGCCACG 5652 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 138194274259516