Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Primula_20veris_20[genbank_20GCA_5F000788445.1_202014-12-03] 8,756 sequences; 309,692,940 total letters Query= NC_001350.1 Length=112930 Score E Sequences producing significant alignments: (Bits) Value seq2233 96.9 3e-15 >seq2233 Length=51071 Score = 96.9 bits (106), Expect = 3e-15 Identities = 85/106 (80%), Gaps = 0/106 (0%) Strand=Plus/Plus Query 101756 ACATGAGCAATCATGCAAGTTAAAAGAGAATAGCTAGCAATGTTAAATGGCACTCCTAAC 101815 ||||||||||||||||| || ||||| | ||| || || || ||||||||||| || Sbjct 16480 ACATGAGCAATCATGCATGTCAAAAGGGCATAAGATGCGATATTGAATGGCACTCCCAAG 16539 Query 101816 CCCATATCAGCTGATCTTTGATACAGTTGACAGGAAAGCTTTCCAT 101861 ||||||||||| |||| ||||||| |||||| || |||| |||| Sbjct 16540 CCCATATCAGCAGATCGCTGATACATTTGACAAGATAGCTCGCCAT 16585 Score = 95.1 bits (104), Expect = 9e-15 Identities = 81/100 (81%), Gaps = 0/100 (0%) Strand=Plus/Plus Query 101756 ACATGAGCAATCATGCAAGTTAAAAGAGAATAGCTAGCAATGTTAAATGGCACTCCTAAC 101815 ||||||||||||||||| || ||||| | ||| || || ||||||||||| || || Sbjct 6446 ACATGAGCAATCATGCATGTCAAAAGGGCATAAGATGCGATATTAAATGGCACCCCCAAA 6505 Query 101816 CCCATATCAGCTGATCTTTGATACAGTTGACAGGAAAGCT 101855 ||||||||||| |||| |||||||| ||| || || |||| Sbjct 6506 CCCATATCAGCAGATCGTTGATACATTTGGCACGACAGCT 6545 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 361212649529756