Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Primula_20veris_20[genbank_20GCA_5F000788445.1_202014-12-03] 8,756 sequences; 309,692,940 total letters Query= NC_003083.1 Length=118584 Score E Sequences producing significant alignments: (Bits) Value seq114 82.4 6e-11 >seq114 Length=372266 Score = 82.4 bits (90), Expect = 6e-11 Identities = 93/125 (74%), Gaps = 0/125 (0%) Strand=Plus/Minus Query 18108 AGTCTAAGTACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCCATTGTTTTA 18167 || ||||| |||| |||||||| || |||||||| ||||||||||| || | |||| Sbjct 349190 AGCCTAAGAACCAGATGAAGTGTCGACTCTTTTTGGATGTTGTAGTCTGCAAGTGTTCGG 349131 Query 18168 CAATCTTCCAATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGCACGCCTTCC 18227 | |||||| | |||||| || || | || | ||||||||||| || | ||||| Sbjct 349130 CCATCTTCTAGTTGTTTTCCAGCGAAAATCAACCTTTGTTGATCAGGTGGAATCCCTTCT 349071 Query 18228 TTATC 18232 ||||| Sbjct 349070 TTATC 349066 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 379303518779220