Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Primula_20veris_20[genbank_20GCA_5F000788445.1_202014-12-03] 8,756 sequences; 309,692,940 total letters Query= NC_006884.2 Length=178249 Score E Sequences producing significant alignments: (Bits) Value seq471 113 5e-20 >seq471 Length=100806 Score = 113 bits (124), Expect = 5e-20 Identities = 161/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 171966 AACTTTTTAACTGCAGCAGTATCAACACCTGGTGATGCTATGGGTCATAGTCTATTGTTC 172025 || |||||||| || ||||| || | |||| | || | | | ||| | | ||||| Sbjct 70226 AATTTTTTAACGGCTGCAGTTTCTATGCCTGCTAATAGTTTAGCACATTCTTTGTTGTTA 70285 Query 172026 CTATGGGGACCTGAGGCACAAGGAGATCTTGTACGATGGTTTCAATTAGGTGGACTATGG 172085 || ||||| ||| | |||||||||||| || || |||| |||||| ||||| || ||| Sbjct 70286 CTCTGGGGTCCTAAAGCACAAGGAGATTTTACTCGTTGGTGTCAATTGGGTGGTCTGTGG 70345 Query 172086 AACTTTGTAGCATTACATGGAGTCTTTGGACTCATAGGTTTCATGCTTAGACAGTTTGAG 172145 | ||||| || | || || | || ||||| |||||||||||| | | || ||||| Sbjct 70346 ACTTTTGTTGCTCTCCACGGTGCTTTCGGACTAATAGGTTTCATGTTATGTCAATTTGAA 70405 Query 172146 ATTGCAGGACTTGTTGGGATACGTCCTTACAACGCACTAGCATTCTC 172192 |||| || ||| |||||||||| || || | |||||||| Sbjct 70406 CTTGCTCGATCTGTGTAATTACGTCCTTATAATGCGATTGCATTCTC 70452 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 570206384079840