Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Primula_20veris_20[genbank_20GCA_5F000788445.1_202014-12-03] 8,756 sequences; 309,692,940 total letters Query= NC_007383.1 Length=134394 Score E Sequences producing significant alignments: (Bits) Value seq139 100 2e-16 >seq139 Length=432677 Score = 100 bits (110), Expect = 2e-16 Identities = 159/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 23990 AATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAA 24049 ||||||| | ||||| ||||| | |||||||| | ||||| | || || ||| | Sbjct 178559 AATGCAAATCTTTGTGAAAACCCTCACTGGAAAGACTATTACTCTAGAGGTTGAGAGCTC 178500 Query 24050 CGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCA 24109 || |||||||| | ||||| ||||||| ||||| || || || || || ||||| Sbjct 178499 GGATACCATCGATAATGTCAAGACAAAGATTCAAGACAAGGAGGGTATTCCGCCAGATCA 178440 Query 24110 ACAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAA 24169 ||||| || || | | ||| ||||| ||||| || | | | | | ||||| || Sbjct 178439 GCAGAGGCTCATCTTTGCCGGGAAGCAGCTCGAGGACGGACGCACCCTTGCTGATTACAA 178380 Query 24170 CATTCAAAAAGAATCTACAATTCATTTAGTGTTAAGATTGAGAGGAGG 24217 ||||||||| |||||||| |||| | ||| | | ||||| || || Sbjct 178379 CATTCAAAAGGAATCTACCCTTCACCTTGTGCTCCGGTTGAGGGGCGG 178332 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 429890119917180