Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Primula_20veris_20[genbank_20GCA_5F000788445.1_202014-12-03] 8,756 sequences; 309,692,940 total letters Query= NC_008520.2 Length=132239 Score E Sequences producing significant alignments: (Bits) Value seq1646 86.0 5e-12 >seq1646 Length=84127 Score = 86.0 bits (94), Expect = 5e-12 Identities = 155/227 (68%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 111187 ATGCAAATTTTTGTCAAAACGATGACCGGCAAAACCATTACCGTGGAAACGGAACCCAGC 111246 ||||| || || ||||| || | || || || ||||| || |||| ||| | Sbjct 61413 ATGCAGATATTCGTCAAGACCCTTACTGGGAAGACCATCACATTGGAGGTGGAGAGCTCG 61354 Query 111247 GATTCTGTTGGCCAGGTAAAACAAAAAATTGCCGACAAAGAAGGCGTTCCCGTCGATCAA 111306 ||| | ||| | | || || ||||||| ||||| || ||| ||||| || || Sbjct 61353 GATACCATTGACAACGTTAAGGCAAAAATTCAGGACAAGGAGGGCATTCCCCCAGACCAG 61294 Query 111307 CAAAGGCTTATTTATGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAAT 111366 || ||| | || | ||| ||||| || ||||||||| | ||| ||||||||||||| Sbjct 61293 CAGAGGTTGATCTTTGCAGGCAAGCAGTTGGAAGATGGGAGGACTTTGGCCGATTATAAC 61234 Query 111367 ATACAAAAAGAATCTACACTACATTTAGTGTTGCGTCTGCGCGGTGG 111413 || || ||||| || || || || | || | ||||| || ||||| Sbjct 61233 ATCCAGAAAGAGTCCACTCTTCACCTTGTCCTCCGTCTTCGTGGTGG 61187 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 422994855815200