Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Primula_20veris_20[genbank_20GCA_5F000788445.1_202014-12-03] 8,756 sequences; 309,692,940 total letters Query= NC_009898.1 Length=368683 Score E Sequences producing significant alignments: (Bits) Value seq1646 141 2e-28 seq187 138 3e-27 seq1470 122 2e-22 seq260 116 9e-21 seq771 114 3e-20 seq114 107 5e-18 seq212 104 6e-17 seq139 100 7e-16 seq1083 86.0 1e-11 seq21 86.0 1e-11 seq85 84.2 5e-11 >seq1646 Length=84127 Score = 141 bits (156), Expect = 2e-28 Identities = 152/200 (76%), Gaps = 6/200 (3%) Strand=Plus/Plus Query 288277 GTGCTTTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCT 288336 ||||| || || |||||||| |||||||| || || || || |||||||| || ||||| Sbjct 62129 GTGCTCTCCTTCTGGATATTGTAGTCGGCTAGGGTACGACCATCTTCTAACTGCTTTCCG 62188 Query 288337 GCGAAGATCAGACGCTGTTGAGAATCTGGG---ATTCCTTCTTTATCCTGGATTTTCGCT 288393 || ||||| || | ||| || |||||| || || ||||||||||| ||||| || Sbjct 62189 GCAAAGATGAGCCTCTGCTGG---TCTGGGGGAATACCCTCTTTATCCTGAATTTTAGCC 62245 Query 288394 TTCACGTTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGA 288453 || ||||| || || | |||| ||| || ||||| ||||| ||||| ||||| ||| Sbjct 62246 TTGACGTTGTCGATGGTATCGGAGCTTTCGACCTCGAGAGTGATGGTCTTGCCGGTGAGA 62305 Query 288454 GTCTTGACGAATATCTGCAT 288473 ||||| || || |||||||| Sbjct 62306 GTCTTCACAAAGATCTGCAT 62325 Score = 116 bits (128), Expect = 9e-21 Identities = 167/233 (72%), Gaps = 12/233 (5%) Strand=Plus/Plus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| || || | || || || |||| ||| ||||| ||||| ||||| ||||| Sbjct 61187 CCACCACGAAGACGGAGGACAAGGTGAAGAGTGGACTCTTTCTGGATGTTATAATCGGCC 61246 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 | || | || ||||| || || || ||||| ||||||| | ||| || |||||| Sbjct 61247 AAAGTCCTCCCATCTTCCAACTGCTTGCCTGCAAAGATCAACCTCTGCTGG---TCTGGG 61303 Query 288367 ---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATC---GCTCGAT 288420 || || || || ||||| ||||| || || ||||| || || | ||| |||| Sbjct 61304 GGAATGCCCTCCTTGTCCTGAATTTTTGCCTTAACGTTGTCAATGGTATCCGAGCTC--- 61360 Query 288421 TCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || || || | ||||| |||||||| || || |||||||||||||||||||| Sbjct 61361 TCCACCTCCAATGTGATGGTCTTCCCAGTAAGGGTCTTGACGAATATCTGCAT 61413 Score = 114 bits (126), Expect = 3e-20 Identities = 164/230 (71%), Gaps = 6/230 (3%) Strand=Plus/Plus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| | ||| | || || || || | ||| || ||||||||||| ||||| || Sbjct 61871 CCACCTCTGAGGCGGAGGACCAGGTGGAGGGTGGACTCCTTTTGGATATTGTAGTCAGCT 61930 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 || ||||| |||||||| | ||||| || || ||||| || | ||| || |||| Sbjct 61931 AGGGTGCGGCCGTCTTCGAGCTGTTTACCGGCAAAGATGAGCCTCTGCTGGTCTGGTGGG 61990 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATC---GCTCGATTCT 288423 || || ||||| || ||||||||||| || || || || || | || ||| ||| Sbjct 61991 ATACCCTCTTTGTCTTGGATTTTCGCCTTGACATTGTCAATGGTGTCAGAGCT---TTCA 62047 Query 288424 ACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 ||||| | || || ||||| ||||| |||||||| || || || ||||| Sbjct 62048 ACTTCCAAGGTAATGGTCTTTCCGGTGAGAGTCTTTACAAAGATTTGCAT 62097 Score = 93.3 bits (102), Expect = 1e-13 Identities = 141/198 (71%), Gaps = 12/198 (6%) Strand=Plus/Plus Query 288282 TTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAA 288341 ||| |||||||| |||||||| || || || || || || || | ||||| || || || Sbjct 61450 TTCCTTTTGGATGTTATAGTCAGCAAGGGTACGCCCATCCTCAAGCTGTTTCCCGGCAAA 61509 Query 288342 GATCAGACGCTGTTGAGAATCTGGG---ATTCCTTCTTTATCCTGGATTTTCGCTTTCAC 288398 ||||| | ||| || ||||| ||||| ||||| || || || || || || || Sbjct 61510 GATCAACCTCTGCTGG---TCTGGAGGAATTCCCTCTTTGTCTTGAATCTTGGCCTTGAC 61566 Query 288399 GTTTTCTATAGAATCG---CTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGT 288455 || || || | ||| ||| || || || | ||||||||||| ||||| || || Sbjct 61567 ATTATCAATGGTGTCGGAGCTC---TCCACCTCCAAGGTGATCGTCTTGCCGGTTAGCGT 61623 Query 288456 CTTGACGAATATCTGCAT 288473 ||||||||| || ||||| Sbjct 61624 CTTGACGAAGATTTGCAT 61641 >seq187 Length=363338 Score = 138 bits (152), Expect = 3e-27 Identities = 172/233 (74%), Gaps = 12/233 (5%) Strand=Plus/Plus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| | ||| | || || ||||||| || ||||| ||||||||||| |||||||| Sbjct 30346 CCACCCCTGAGACGTAGGACCAGATGAAGGGTACTTTCCTTTTGGATATTGTAGTCGGCC 30405 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGAC---GCTGTTGAGAATCT 288363 | || || ||||| |||| |||||||| ||||| || || | |||| | | | Sbjct 30406 AAGGTACGACCGTCCTCTAGCTGTTTTCCAGCGAATATAAGCCTTTGCTGGTCTGGA--- 30462 Query 288364 GGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCG---CTCGAT 288420 || || || ||||||||||||||||| || || ||||| || || | ||| ||| Sbjct 30463 GGTATGCCCTCTTTATCCTGGATTTTTGCCTTGACGTTGTCGATGGTGTCGGAACTC--- 30519 Query 288421 TCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || || ||||| ||||| ||||| ||||| || ||||| || || |||||||| Sbjct 30520 TCGACCTCGAGAGTGATGGTCTTGCCGGTGAGTGTCTTCACAAAGATCTGCAT 30572 Score = 125 bits (138), Expect = 2e-23 Identities = 173/238 (73%), Gaps = 13/238 (5%) Strand=Plus/Plus Query 288242 CATGTCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGT 288301 |||| ||||| | ||| | || || ||||| | ||| || || ||||| || |||| Sbjct 42053 CATG-CCACCCCTGAGACGGAGGACCAGATGGAGAGTGGACTCCTTCTGGATGTTGTAGT 42111 Query 288302 CGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAAT 288361 |||| || || ||||| || || | |||||||| || ||||| || | || ||| | Sbjct 42112 CGGCAAGGGTACGTCCATCCTCGAGCTGTTTTCCGGCAAAGATGAGCCTTTGCTGA---T 42168 Query 288362 CTGGG---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATC---GC 288415 | ||| ||||| || |||||||||||||| || || ||||| || || | || || Sbjct 42169 CCGGGGGAATTCCCTCCTTATCCTGGATTTTGGCCTTGACGTTGTCGATGGTGTCGGAGC 42228 Query 288416 TCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || || || ||||| ||||| ||||| || || || ||||||||||| |||||||| Sbjct 42229 TC---TCCACCTCGAGGGTGATGGTCTTGCCCGTAAGGGTCTTGACGAAGATCTGCAT 42283 Score = 122 bits (134), Expect = 2e-22 Identities = 182/253 (72%), Gaps = 14/253 (6%) Strand=Plus/Plus Query 288242 CATGTCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGT 288301 |||| ||||| | ||| | || || || || | ||| || || || ||||| |||| Sbjct 42281 CATG-CCACCCCTGAGACGGAGGACCAGGTGGAGAGTGGACTCCTTCTGTATATTGTAGT 42339 Query 288302 CGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAAT 288361 | || || ||||| ||||| || | ||||| || || ||||| || | ||| || | Sbjct 42340 CAGCTAGGGTGCGACCGTCCTCGAGCTGTTTACCGGCAAAGATGAGCCTCTGCTGG---T 42396 Query 288362 CTGGG---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATC---GC 288415 |||| ||||| || |||||||||||||| || || ||||| || || | || || Sbjct 42397 CTGGAGGAATTCCCTCCTTATCCTGGATTTTGGCCTTGACGTTGTCGATGGTGTCGGAGC 42456 Query 288416 TCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCATTA 288475 || || || ||||| || || ||||| ||||| || |||||||||||||| |||| | Sbjct 42457 TC---TCGACCTCGAGAGTAATGGTCTTGCCGGTGAGTGTCTTGACGAATATTTGCA-TC 42512 Query 288476 TGTTATTCTAATA 288488 ||||||| |||| Sbjct 42513 TGTTATTTAAATA 42525 Score = 120 bits (132), Expect = 7e-22 Identities = 168/233 (72%), Gaps = 12/233 (5%) Strand=Plus/Plus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| ||||| | || || || |||| || ||||| ||||||||||| ||||| Sbjct 21540 CCACCACGGAGACGGAGGACAAGGTGAAGAGTAGACTCTTTCTGGATATTATAATCGGCC 21599 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 | || | || ||||| || || || || || ||||||| | ||| || || ||| Sbjct 21600 AAAGTCCTCCCATCTTCCAACTGCTTGCCGGCAAAGATCAACCTCTGCTG---GTCCGGG 21656 Query 288367 ---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATC---GCTCGAT 288420 || || || |||||||| |||||||| |||||||| || || | ||| |||| Sbjct 21657 GGAATACCCTCCTTATCCTGAATTTTCGCCTTCACGTTATCGATCGTATCAGAGCTC--- 21713 Query 288421 TCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || || || | ||||| ||||||||||| || |||||||| || |||||||| Sbjct 21714 TCCACCTCCAAGGTGATAGTCTTCCCGGTAAGGGTCTTGACAAAAATCTGCAT 21766 Score = 118 bits (130), Expect = 3e-21 Identities = 150/204 (74%), Gaps = 12/204 (6%) Strand=Plus/Plus Query 288277 GTGCTTTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCT 288336 || ||||| || |||||||| ||||| || ||||| || ||||| || | |||||||| Sbjct 22482 GTACTTTCCTTCTGGATATTGTAGTCAGCTAGCGTACGACCGTCCTCGAGCTGTTTTCCG 22541 Query 288337 GCGAAGATCAGACGCTGTTGAGAATCTGGG---ATTCCTTCTTTATCCTGGATTTTCGCT 288393 || ||||| || | ||| ||| || ||| || ||||| || ||||| || || ||| Sbjct 22542 GCAAAGATGAGCCTCTGCTGA---TCCGGGGGAATCCCTTCCTTGTCCTGAATCTTGGCT 22598 Query 288394 TTCACGTTTTCTATAGAATCG---CTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTC 288450 || || || ||||| | ||| ||| || || || | ||||| ||||| || || Sbjct 22599 TTAACATTGTCTATGGTGTCGGAGCTC---TCCACCTCCAAGGTGATGGTCTTTCCAGTA 22655 Query 288451 AGAGTCTTGACGAATATCTGCATT 288474 || |||||||| |||||||||||| Sbjct 22656 AGCGTCTTGACAAATATCTGCATT 22679 Score = 116 bits (128), Expect = 9e-21 Identities = 167/233 (72%), Gaps = 12/233 (5%) Strand=Plus/Plus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| ||||| | || || || |||| ||| ||||| ||||| ||||| ||||| Sbjct 29206 CCACCACGGAGACGGAGGACAAGGTGAAGAGTGGACTCTTTCTGGATGTTATAATCGGCC 29265 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 | || | || ||||| || || || ||||| ||||||| | ||| || |||||| Sbjct 29266 AAAGTCCTCCCATCTTCCAACTGCTTGCCTGCAAAGATCAACCTCTGCTGG---TCTGGG 29322 Query 288367 ---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCG---CTCGAT 288420 || || || |||||||| || || || |||||||| || || | ||| ||| Sbjct 29323 GGAATACCCTCCTTATCCTGAATCTTGGCCTTCACGTTGTCGATCGTATCCGAACTC--- 29379 Query 288421 TCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || || || | ||||| |||||||| || || ||||||||||| |||||||| Sbjct 29380 TCAACCTCCAAGGTGATAGTCTTCCCCGTAAGGGTCTTGACGAAAATCTGCAT 29432 Score = 111 bits (122), Expect = 4e-19 Identities = 145/198 (73%), Gaps = 12/198 (6%) Strand=Plus/Plus Query 288282 TTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAA 288341 ||| || ||||| || ||||| || || || |||||||| || | ||| || || ||||| Sbjct 29925 TTCCTTCTGGATGTTGTAGTCAGCAAGGGTACGTCCGTCCTCAAGTTGCTTGCCGGCGAA 29984 Query 288342 GATCAGACGCTGTTGAGAATCTGGG---ATTCCTTCTTTATCCTGGATTTTCGCTTTCAC 288398 ||| || | || || |||||| || |||||||| ||||| || || || || || Sbjct 29985 GATGAGCCTTTGCTGG---TCTGGGGGGATCCCTTCTTTGTCCTGAATCTTGGCCTTTAC 30041 Query 288399 GTTTTCTATAGAATCG---CTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGT 288455 ||| || || | ||| ||| || || ||||| ||||| ||||| || || ||||| Sbjct 30042 GTTATCAATGGTGTCGGAACTC---TCAACCTCGAGGGTGATGGTCTTGCCCGTAAGAGT 30098 Query 288456 CTTGACGAATATCTGCAT 288473 |||||| || |||||||| Sbjct 30099 CTTGACAAAGATCTGCAT 30116 Score = 111 bits (122), Expect = 4e-19 Identities = 166/233 (71%), Gaps = 12/233 (5%) Strand=Plus/Plus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| || || | || || || |||| || ||||| ||||| ||||| || || Sbjct 41145 CCACCACGAAGACGGAGGACAAGGTGAAGAGTAGACTCTTTCTGGATGTTATAATCAGCC 41204 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 | ||| | || ||||| || ||||| || |||||||||| | ||| ||| ||||| Sbjct 41205 AACGTCCTCCCATCTTCCAACTGTTTGCCAGCGAAGATCAACCTCTGCTGA---TCTGGA 41261 Query 288367 ---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATC---GCTCGAT 288420 || || || ||||||||||| || || ||||| || || || | || |||| Sbjct 41262 GGAATACCCTCCTTATCCTGGATCTTAGCCTTCACATTATCGATGGTGTCCGAGCTC--- 41318 Query 288421 TCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || || || || ||||| |||||||| || || |||||||| || |||||||| Sbjct 41319 TCCACCTCCAGGGTGATGGTCTTCCCCGTAAGGGTCTTGACAAAGATCTGCAT 41371 Score = 107 bits (118), Expect = 5e-18 Identities = 165/233 (71%), Gaps = 12/233 (5%) Strand=Plus/Plus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||||||||| | || || | |||| || ||| || ||||| ||||| ||||| Sbjct 21768 CCACCGCGGAGACGGAGCACCAAGTGAAGGGTTGATTCCTTCTGGATGTTATAATCGGCA 21827 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 || || ||||| ||||| | || || || || ||||||| | ||| || ||| ||| Sbjct 21828 AGGGTACGTCCATCTTCAAGCTGCTTCCCGGCAAAGATCAACCTCTGCTG---ATCCGGG 21884 Query 288367 ---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATC---GCTCGAT 288420 || ||||| || |||||||| || || || ||||| || || | || ||| Sbjct 21885 GGAATCCCTTCCTTGTCCTGGATCTTGGCCTTGACGTTGTCAATTGTGTCAGAACTC--- 21941 Query 288421 TCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || || || | ||||||||||| ||||| || ||||| ||||| || ||||| Sbjct 21942 TCGACCTCCAAAGTGATCGTCTTGCCGGTGAGGGTCTTCACGAAGATTTGCAT 21994 Score = 100 bits (110), Expect = 7e-16 Identities = 142/197 (72%), Gaps = 12/197 (6%) Strand=Plus/Plus Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342 || || ||||| || |||||||| || || |||||||| || | |||||||| || ||| Sbjct 41865 TCCTTCTGGATGTTGTAGTCGGCAAGGGTACGTCCGTCCTCGAGCTGTTTTCCGGCAAAG 41924 Query 288343 ATCAGACGCTGTTGAGAATCTGGG---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACG 288399 || || | || ||| || ||| || ||||| || ||||| || || || || ||| Sbjct 41925 ATGAGCCTTTGCTGA---TCCGGGGGAATCCCTTCCTTGTCCTGAATCTTGGCCTTGACG 41981 Query 288400 TTTTCTATAGAATCG---CTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTC 288456 || || || | ||| ||| || || || || || || ||||| || || || ||| Sbjct 41982 TTGTCGATGGTGTCGGAGCTC---TCCACCTCAAGGGTAATGGTCTTTCCCGTAAGGGTC 42038 Query 288457 TTGACGAATATCTGCAT 288473 |||||||| |||||||| Sbjct 42039 TTGACGAAGATCTGCAT 42055 Score = 87.8 bits (96), Expect = 4e-12 Identities = 136/194 (70%), Gaps = 6/194 (3%) Strand=Plus/Plus Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342 || || ||||| || || || || || || || ||||| || | ||||| || |||||| Sbjct 22260 TCCTTCTGGATGTTGTAATCAGCTAGGGTACGYCCGTCCTCAAGCTGTTTACCGGCGAAG 22319 Query 288343 ATCAGACGCTGTTGAGAATCTGGG---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACG 288399 || || | ||| || |||||| || ||||| || ||||| || || || || || Sbjct 22320 ATGAGCCTCTGCTGG---TCTGGGGGAATCCCTTCCTTGTCCTGAATCTTGGCCTTGACA 22376 Query 288400 TTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTG 288459 || || || | || ||| || || || ||||| ||||| || || ||||||||| Sbjct 22377 TTGTCAATGGTGTCAGAACTTTCAACCTCAAGGGTGATGGTCTTGCCAGTAAGAGTCTTG 22436 Query 288460 ACGAATATCTGCAT 288473 || || || ||||| Sbjct 22437 ACAAAGATTTGCAT 22450 >seq1470 Length=49555 Score = 122 bits (134), Expect = 2e-22 Identities = 144/194 (74%), Gaps = 6/194 (3%) Strand=Plus/Minus Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342 || || ||||| || |||||||| || || |||||||| || | ||||| || || ||| Sbjct 31262 TCCTTCTGGATGTTGTAGTCGGCAAGRGTACGTCCGTCCTCAAGCTGTTTCCCGGCAAAG 31203 Query 288343 ATCAGACGCTGTTGAGAATCTGGG---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACG 288399 |||| | ||| || |||||| || ||||| || |||||||| || || || ||| Sbjct 31202 ATCAACCTCTGCTGG---TCTGGGGGAATCCCTTCCTTGTCCTGGATCTTGGCCTTGACG 31146 Query 288400 TTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTG 288459 || || |||| ||| ||| || || | ||||| ||||| || || ||||||||| Sbjct 31145 TTATCAATAGTGTCGGAACTTTCGACCTCCAAAGTGATGGTCTTTCCCGTAAGAGTCTTG 31086 Query 288460 ACGAATATCTGCAT 288473 |||||||||||||| Sbjct 31085 ACGAATATCTGCAT 31072 Score = 109 bits (120), Expect = 1e-18 Identities = 163/230 (71%), Gaps = 6/230 (3%) Strand=Plus/Minus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| ||||| | ||||| | || | || ||| || ||||| || ||||| || Sbjct 31070 CCACCACGGAGACGGAGTACCAAGTGGAGGGTCGATTCCTTCTGGATGTTGTAGTCAGCA 31011 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 || || || || || || | ||||| || || ||||||| | || || |||||| Sbjct 31010 AGGGTACGCCCATCCTCAAGCTGTTTCCCGGCAAAGATCAACCTTTGCTGG---TCTGGG 30954 Query 288367 ---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCT 288423 || ||||| || |||||||| || || || ||||| || |||| ||| ||| Sbjct 30953 GGAATCCCTTCCTTGTCCTGGATCTTGGCCTTGACGTTGTCAATAGTGTCGGAACTTTCG 30894 Query 288424 ACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 |||||||| ||||||||||| || || || ||||| ||||| || ||||| Sbjct 30893 ACTTCGAGGGTGATCGTCTTTCCAGTGAGGGTCTTCACGAAGATTTGCAT 30844 >seq260 Length=279698 Score = 116 bits (128), Expect = 9e-21 Identities = 149/203 (73%), Gaps = 12/203 (6%) Strand=Plus/Plus Query 288277 GTGCTTTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCT 288336 || ||||| || ||||| ||||||||||| || || || || || || | |||||||| Sbjct 162578 GTACTTTCCTTCTGGATGTTATAGTCGGCAAGGGTACGACCATCCTCGAGCTGTTTTCCA 162637 Query 288337 GCGAAGATCAGAC---GCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCT 288393 |||||||| || | |||| | | | |||||||| |||||||| |||||||| || Sbjct 162638 GCGAAGATGAGTCTTTGCTGGTCTGGA---GGGATTCCCTCTTTATCTTGGATTTTTGCC 162694 Query 288394 TTCACGTTTTCTATAGAATC---GCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTC 288450 || ||||| || || | || |||| || || || || ||||| ||||| || || Sbjct 162695 TTAACGTTGTCGATGGTGTCTGAGCTC---TCGACCTCCAGAGTGATGGTCTTGCCAGTG 162751 Query 288451 AGAGTCTTGACGAATATCTGCAT 288473 || ||||| || || |||||||| Sbjct 162752 AGTGTCTTCACAAAGATCTGCAT 162774 Score = 111 bits (122), Expect = 4e-19 Identities = 166/233 (71%), Gaps = 12/233 (5%) Strand=Plus/Plus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| || || | || || ||||||| ||| ||||| ||||| ||||| || || Sbjct 161864 CCACCACGAAGACGGAGGACAAGATGAAGAGTGGACTCTTTCTGGATGTTATAATCCGCC 161923 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 | || | || || || || || || || |||||||||| | ||| ||| || ||| Sbjct 161924 AAAGTCCTCCCATCCTCCAACTGCTTGCCGGCGAAGATCAACCTCTGCTGA---TCCGGG 161980 Query 288367 ---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATC---GCTCGAT 288420 ||||| || |||||||| || || || ||||| || || || | ||| |||| Sbjct 161981 GGAATTCCCTCCTTATCCTGAATCTTGGCCTTCACATTGTCAATGGTATCCGAGCTC--- 162037 Query 288421 TCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || || || | ||||| |||||||| || || |||||||| ||||||||||| Sbjct 162038 TCCACCTCCAAGGTGATGGTCTTCCCCGTAAGGGTCTTGACAAATATCTGCAT 162090 Score = 102 bits (112), Expect = 2e-16 Identities = 164/233 (70%), Gaps = 12/233 (5%) Strand=Plus/Plus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| ||||| | || || | || | || || || || ||||| || || || || Sbjct 162320 CCACCACGGAGACGTAGGACCAAGTGCAGGGTACTCTCCTTCTGGATGTTGTAATCAGCT 162379 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 || || || || || || | ||| || || ||||||||||| | ||| || || ||| Sbjct 162380 AGGGTACGGCCATCCTCGAGTTGCTTACCGGCGAAGATCAGCCTCTGCTG---GTCCGGG 162436 Query 288367 ---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATC---GCTCGAT 288420 ||||| || ||||| || ||||| || || ||||| || || | || |||| Sbjct 162437 GGAATTCCCTCCTTATCTTGAATTTTGGCCTTGACGTTGTCGATGGTGTCGGAGCTC--- 162493 Query 288421 TCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || || || | ||||| ||||| |||||||| ||||||||||| || ||||| Sbjct 162494 TCCACCTCCAAGGTGATGGTCTTGCCGGTCAGCGTCTTGACGAAGATTTGCAT 162546 >seq771 Length=161796 Score = 114 bits (126), Expect = 3e-20 Identities = 145/197 (74%), Gaps = 12/197 (6%) Strand=Plus/Minus Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342 || ||||||||||||||||| || || || || | ||| || | |||||||| || ||| Sbjct 43232 TCCTTTTGGATATTATAGTCAGCAAGGGTACGACTGTCCTCAAGCTGTTTTCCGGCAAAG 43173 Query 288343 ATCAGACGCTGTTGAGAATCTGG---GATTCCTTCTTTATCCTGGATTTTCGCTTTCACG 288399 || || | ||| || ||||| ||| || || ||||||||||| || || || ||| Sbjct 43172 ATGAGCCTCTGCTGG---TCTGGAGGGATACCCTCCTTATCCTGGATCTTGGCCTTAACG 43116 Query 288400 TTTTCTATAGAATC---GCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTC 288456 || || || | || |||| || || ||||| ||||| ||||| ||||| || ||| Sbjct 43115 TTGTCGATGGTGTCTGAGCTC---TCGACCTCGAGAGTGATGGTCTTGCCGGTGAGTGTC 43059 Query 288457 TTGACGAATATCTGCAT 288473 || || || |||||||| Sbjct 43058 TTAACAAAGATCTGCAT 43042 Score = 98.7 bits (108), Expect = 2e-15 Identities = 139/194 (72%), Gaps = 6/194 (3%) Strand=Plus/Minus Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342 ||||| ||||| ||||| ||||| | || | || | ||| || ||||| || || ||| Sbjct 43688 TCTTTCTGGATGTTATAATCGGCCAAAGTCCTCCCATATTCCAACTGTTTCCCAGCAAAG 43629 Query 288343 ATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTT 288402 |||| | ||| || | || || ||||| || |||||||| || || || | ||| Sbjct 43628 ATCAACCTCTGCTGGTCAGGGGGAATCCCTTCCTTGTCCTGGATCTTGGCCTTGATGTTA 43569 Query 288403 TCTATAGAATCG---CTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTG 288459 || || | ||| ||| || || || | ||||| |||||||| || || |||||| Sbjct 43568 TCAATGGTGTCGGAGCTC---TCGACCTCCAAAGTGATGGTCTTCCCTGTGAGGGTCTTG 43512 Query 288460 ACGAATATCTGCAT 288473 |||||||||||||| Sbjct 43511 ACGAATATCTGCAT 43498 >seq114 Length=372266 Score = 107 bits (118), Expect = 5e-18 Identities = 107/139 (77%), Gaps = 0/139 (0%) Strand=Plus/Minus Query 288246 TCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGC 288305 |||||| | ||| ||||| || ||||||| || ||||||||||| || ||||| || Sbjct 349200 TCCACCTCTGAGCCTAAGAACCAGATGAAGTGTCGACTCTTTTTGGATGTTGTAGTCTGC 349141 Query 288306 GAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGG 288365 || || || || ||||||| ||||||||| ||||| |||| | |||||| | ||| Sbjct 349140 AAGTGTTCGGCCATCTTCTAGTTGTTTTCCAGCGAAAATCAACCTTTGTTGATCAGGTGG 349081 Query 288366 GATTCCTTCTTTATCCTGG 288384 || ||||||||||||||| Sbjct 349080 AATCCCTTCTTTATCCTGG 349062 >seq212 Length=467306 Score = 104 bits (114), Expect = 6e-17 Identities = 86/105 (82%), Gaps = 0/105 (0%) Strand=Plus/Minus Query 288370 CCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACTTCG 288429 ||||| ||||||||||| || ||||| ||||| || |||| ||| |||||||| || ||| Sbjct 58875 CCTTCCTTATCCTGGATCTTAGCTTTAACGTTATCAATAGTATCACTCGATTCGACCTCG 58816 Query 288430 AGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCATT 288474 || ||||| || ||||| || || || || ||||| ||||||||| Sbjct 58815 AGAGTGATGGTTTTCCCAGTTAGGGTTTTCACGAAAATCTGCATT 58771 >seq139 Length=432677 Score = 100 bits (110), Expect = 7e-16 Identities = 142/197 (72%), Gaps = 12/197 (6%) Strand=Plus/Plus Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342 || || || || |||||||| || || ||||| || ||||| | || || || || ||| Sbjct 178140 TCCTTCTGAATGTTATAGTCTGCAAGTGTGCGACCATCTTCAAGCTGCTTCCCGGCAAAG 178199 Query 288343 ATCAGACGCTGTTGAGAATCTGGG---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACG 288399 || || | ||| ||| ||||| || || |||||||||||||| ||||| || ||| Sbjct 178200 ATAAGCCTCTGCTGA---TCTGGAGGAATACCCTCTTTATCCTGGATCTTCGCCTTTACG 178256 Query 288400 TTTTCTATAGAATC---GCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTC 288456 || || || | ||| |||| || || || || || || || || ||||||| ||| Sbjct 178257 TTGTCGATTGTATCAGAGCTC---TCAACCTCAAGTGTAATGGTTTTACCGGTCAAGGTC 178313 Query 288457 TTGACGAATATCTGCAT 288473 || || || |||||||| Sbjct 178314 TTAACAAAGATCTGCAT 178330 Score = 98.7 bits (108), Expect = 2e-15 Identities = 161/231 (70%), Gaps = 6/231 (3%) Strand=Plus/Plus Query 288246 TCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGC 288305 |||||| | || | || || ||||||| || ||| || || || || ||||| || Sbjct 178559 TCCACCTCTAAGACGGAGCACCAGATGAAGGGTTGATTCCTTCTGAATGTTGTAGTCAGC 178618 Query 288306 GAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTG- 288364 || || || || || || | || ||||| || ||||| || | ||| ||| |||| Sbjct 178619 TAGGGTTCGGCCATCCTCGAGCTGCTTTCCAGCAAAGATTAGCCTCTGCTGA---TCTGT 178675 Query 288365 --GGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTC 288422 |||| || ||||| || || ||||| | ||| || |||| | || ||| ||| Sbjct 178676 CGGGATGCCCTCTTTGTCTTGTATTTTGGATTTGACACTTTCGACAGTATCAGGACTTTC 178735 Query 288423 TACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || ||||| || || ||||| ||||| || || ||||| ||||||||||| Sbjct 178736 CACATCGAGGGTTATAGTCTTTCCGGTAAGGGTTTTGACAAATATCTGCAT 178786 Score = 87.8 bits (96), Expect = 4e-12 Identities = 130/182 (71%), Gaps = 12/182 (7%) Strand=Plus/Plus Query 288298 TAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGA 288357 || || || || || || ||||| |||| || ||||| ||||| ||||| | ||| ||| Sbjct 177927 TAATCTGCAAGTGTACGACCGTCCTCTAGCTGCTTTCCGGCGAAAATCAGCCTCTGCTGA 177986 Query 288358 GAATCTGGG---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATC- 288413 ||||| || || |||||||||||||| || || || || || || || | ||| Sbjct 177987 ---TCTGGAGGAATACCCTCTTTATCCTGGATCTTTGCCTTAACATTATCGATTGTATCA 178043 Query 288414 --GCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGC 288471 ||| || || || || ||||| ||||| || |||| ||||| || || |||||| Sbjct 178044 GAACTC---TCGACCTCAAGAGTGATGGTCTTGCCAGTCAAGGTCTTAACAAAAATCTGC 178100 Query 288472 AT 288473 || Sbjct 178101 AT 178102 >seq1083 Length=90715 Score = 86.0 bits (94), Expect = 1e-11 Identities = 88/114 (77%), Gaps = 6/114 (5%) Strand=Plus/Plus Query 288363 TGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATC---GCTCGA 288419 ||| || ||||| || ||||| || || ||||| || || || |||| ||| |||| Sbjct 35793 TGGTATCCCTTCCTTGTCCTGTATCTTTGCTTTAACATTATCGATAGTATCCGAGCTC-- 35850 Query 288420 TTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || ||||||||||| ||||| ||||| |||| |||||| || || |||||||| Sbjct 35851 -TCAACTTCGAGCGTAATCGTTTTCCCAGTCAAAGTCTTCACAAAAATCTGCAT 35903 >seq21 Length=880249 Score = 86.0 bits (94), Expect = 1e-11 Identities = 109/149 (73%), Gaps = 6/149 (4%) Strand=Plus/Minus Query 288328 TGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATT 288387 ||||| || || ||||| || || || ||| | |||||| ||||| ||||| || || Sbjct 295663 TGTTTACCGGCAAAGATGAGTCGTTGCTGATCAGGTGGGATACCTTCCTTATCTTGAATC 295604 Query 288388 TTCGCTTTCACGTTTTCTATAGAATCG---CTCGATTCTACTTCGAGCGTGATCGTCTTC 288444 || || || || || || || | ||| ||| ||||| || ||||| ||||||||| Sbjct 295603 TTAGCCTTGACATTGTCGATGGTATCAGAACTC---TCTACCTCTAGCGTTATCGTCTTC 295547 Query 288445 CCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || || || || || ||||| |||||||| Sbjct 295546 CCCGTTAGGGTTTTCACGAAGATCTGCAT 295518 >seq85 Length=395883 Score = 84.2 bits (92), Expect = 5e-11 Identities = 81/104 (78%), Gaps = 0/104 (0%) Strand=Plus/Plus Query 288370 CCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACTTCG 288429 ||||| || || |||||||| || || || || || || | ||| |||||||| ||||| Sbjct 147589 CCTTCCTTGTCTTGGATTTTAGCCTTGACATTATCAATGGTATCACTCGATTCCACTTCA 147648 Query 288430 AGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || || ||||| || || |||| ||||| || ||||||||||| Sbjct 147649 AGTGTTATCGTTTTACCCGTCAACGTCTTCACAAATATCTGCAT 147692 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1179522058996568