Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Primula_20veris_20[genbank_20GCA_5F000788445.1_202014-12-03] 8,756 sequences; 309,692,940 total letters Query= NC_010191.2 Length=186713 Score E Sequences producing significant alignments: (Bits) Value seq524 98.7 1e-15 >seq524 Length=308948 Score = 98.7 bits (108), Expect = 1e-15 Identities = 148/207 (71%), Gaps = 5/207 (2%) Strand=Plus/Plus Query 126113 AGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAACCCGAGAAGAAGATTCCCTCC 126172 ||||| | |||||| | |||||| || |||||||| |||||||| |||||||| ||| Sbjct 106120 AGACCTCTCTTCTTGAGCCAGAAGATAGCACAAAAACTTCCCGAGAAAAAGATTCCTTCC 106179 Query 126173 ACACACGCGAACGCAAAGAGACGCTCAGCAAAGGA-GCGCGACTTTGTGTCAAACCACTT 126231 |||||||| || |||| | | ||||||||| || | | || | || | |||| | Sbjct 106180 ACACACGCAAAAGCAACAATCCTCTCAGCAAAAGACTCCCCACCAT-TG---ATCCACCT 106235 Query 126232 CATCGCCCACTGCGCCTTTTTCTCGATACACGGGACGGTCTGGATCGCTTCAAAGAGTTC 126291 ||| ||||| | ||||| ||||| | ||| |||| |||| | ||| | || || Sbjct 106236 CATTGCCCATTTGGCCTTCTTCTCAACACAGGGGATCGTCTCCACCGCATGGAACAGCCT 106295 Query 126292 CTTCTTTTCTGATGGATCTTTGATGTA 126318 | |||||||| | ||||| ||||| Sbjct 106296 GTGCTTTTCTGCAGAGTCTTTTATGTA 106322 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 597288219648480