Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Primula_20veris_20[genbank_20GCA_5F000788445.1_202014-12-03] 8,756 sequences; 309,692,940 total letters Query= NC_013772.1 Length=176677 Score E Sequences producing significant alignments: (Bits) Value seq260 116 4e-21 seq187 114 1e-20 seq1083 111 2e-19 seq1646 105 8e-18 seq1470 100 3e-16 seq771 100 3e-16 seq139 89.7 6e-13 >seq260 Length=279698 Score = 116 bits (128), Expect = 4e-21 Identities = 156/213 (73%), Gaps = 8/213 (4%) Strand=Plus/Plus Query 46385 ACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCG 46444 |||| |||| ||||||||||| ||||| ||||| || | ||| || || | || ||| Sbjct 162338 ACCAAGTGCAGGGTACTCTCCTTCTGGATGTTGTAATCAGCTAGGGTACGGCCATCCTCG 162397 Query 46445 AGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATG 46504 || ||||| |||||||| |||| | ||||||||| | || | | |||||| || Sbjct 162398 AGTTGCTTACCGGCGAAGATCAGCCTCTGCTGGTCCGGGGGAATTCCCTCCTTATCTTGA 162457 Query 46505 ATCTTCTTCTTGAGCGTCG-CCACCGTGTC---GCTCGATTCCACATCCACCGTGATGGT 46560 || || ||||| ||| | | | ||||| |||| ||||| |||| |||||||| Sbjct 162458 ATTTTGGCCTTGA-CGTTGTCGATGGTGTCGGAGCTC---TCCACCTCCAAGGTGATGGT 162513 Query 46561 TTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 ||||| |||||||| || || ||||||||||| Sbjct 162514 CTTGCCGGTCAGCGTCTTGACGAAGATTTGCAT 162546 Score = 91.5 bits (100), Expect = 2e-13 Identities = 161/231 (70%), Gaps = 8/231 (3%) Strand=Plus/Plus Query 46367 CCTCCTCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGAT 46426 || ||||||||||| | |||| || | ||||| ||||| ||||| || ||||||| Sbjct 162548 CCACCTCTTAAACGTAGGACCAAGTGTAGGGTACTTTCCTTCTGGATGTTATAGTCGGCA 162607 Query 46427 AGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGC 46486 || || || | || |||||||| || || ||||| || | | |||||||| | || Sbjct 162608 AGGGTACGACCATCCTCGAGCTGTTTTCCAGCGAAGATGAGTCTTTGCTGGTCTGGAGGG 162667 Query 46487 ACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCG-CCACCGTGTC---GCTCGATTC 46542 | | ||| || || ||| || | | | | ||| | | | ||||| |||| || Sbjct 162668 ATTCCCTCTTTATCTTGGAT-TTTTGCCTTAACGTTGTCGATGGTGTCTGAGCTC---TC 162723 Query 46543 CACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 || |||| |||||||| ||||| || || || || |||||||| ||||| Sbjct 162724 GACCTCCAGAGTGATGGTCTTGCCAGTGAGTGTCTTCACAAAGATCTGCAT 162774 >seq187 Length=363338 Score = 114 bits (126), Expect = 1e-20 Identities = 168/234 (72%), Gaps = 8/234 (3%) Strand=Plus/Plus Query 46365 TGCCTCCTCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGG 46424 |||| ||||| ||||| | |||| || || ||||| ||||| |||||||||||||| | Sbjct 22450 TGCCACCTCTCAAACGTAGGACCAAGTGTAAGGTACTTTCCTTCTGGATATTGTAGTCAG 22509 Query 46425 ATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCG 46484 ||| || || |||| |||||||| || ||||| || || | | |||||| || | | Sbjct 22510 CTAGCGTACGACCGTCCTCGAGCTGTTTTCCGGCAAAGATGAGCCTCTGCTGATCCGGGG 22569 Query 46485 GCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCG-CCACCGTGTC---GCTCGAT 46540 | | | ||||||||| ||||| ||| | | | | | | ||||| |||| Sbjct 22570 GAATCCCTTCCTTGTCCTGAATCTT-GGCTTTAACATTGTCTATGGTGTCGGAGCTC--- 22625 Query 46541 TCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCATT 46594 ||||| |||| |||||||| || || || ||||| || ||||| || |||||| Sbjct 22626 TCCACCTCCAAGGTGATGGTCTTTCCAGTAAGCGTCTTGACAAATATCTGCATT 22679 Score = 113 bits (124), Expect = 5e-20 Identities = 155/213 (73%), Gaps = 8/213 (4%) Strand=Plus/Plus Query 46385 ACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCG 46444 |||| |||| ||||||||||| ||||| ||||| || | ||| ||||| |||| || Sbjct 22014 ACCAAGTGCAGGGTACTCTCCTTCTGGATGTTGTAATCAGCTAGGGTGCGGCCGTCCTCC 22073 Query 46445 AGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATG 46504 ||||| || |||||||| || | | |||||| || | || | | ||||||||| Sbjct 22074 AGCTGTTTACCGGCGAAGATGAGCCTCTGCTGATCCGGGGGAATTCCCTCCTTGTCTTGA 22133 Query 46505 ATCTTCTTCTTGAGCGTCG-CCACCGTGTC---GCTCGATTCCACATCCACCGTGATGGT 46560 || || ||||| ||| | | | ||||| |||| || || |||| |||||||| Sbjct 22134 ATTTTGGCCTTGA-CGTTGTCTATGGTGTCGGAGCTC---TCAACCTCCAAGGTGATGGT 22189 Query 46561 TTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 ||||| |||| ||| || |||||||||||||| Sbjct 22190 CTTGCCGGTCAACGTCTTGACAAAGATTTGCAT 22222 Score = 113 bits (124), Expect = 5e-20 Identities = 157/219 (72%), Gaps = 6/219 (3%) Strand=Plus/Plus Query 46378 ACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTC 46437 ||| | ||||| |||| ||| |||||| ||||| ||||| || | ||| || ||| | Sbjct 29445 ACGGAGCACCAAGTGCAGAGTAGACTCCTTCTGGATGTTGTAATCAGCTAGGGTACGCCC 29504 Query 46438 GTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTT 46497 || || ||||| || ||||| || ||||| | ||||||||| | || | | |||||| Sbjct 29505 ATCCTCAAGCTGTTTCCCGGCAAAGATCAACCTCTGCTGGTCAGGGGGAATACCCTCCTT 29564 Query 46498 GTCCATGATCTTCTTCTTGAGCGTCGCCACCGTGTCG---CTCGATTCCACATCCACCGT 46554 ||| ||||| ||| | | | | ||||||| ||| ||||| |||| || Sbjct 29565 ATCCTGAATCTTGGCCTTCACGTTATCGATCGTGTCGGAGCTC---TCCACCTCCAAGGT 29621 Query 46555 GATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 ||| || || || ||||||||||| || ||||||||||| Sbjct 29622 GATAGTCTTCCCAGTCAGCGTTTTGACGAAGATTTGCAT 29660 Score = 109 bits (120), Expect = 6e-19 Identities = 165/231 (71%), Gaps = 8/231 (3%) Strand=Plus/Plus Query 46367 CCTCCTCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGAT 46426 || || || | ||| | |||||||| | ||||| |||||||||||||||||||||| Sbjct 30346 CCACCCCTGAGACGTAGGACCAGATGAAGGGTACTTTCCTTTTGGATATTGTAGTCGGCC 30405 Query 46427 AGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGC 46486 | || || |||| || ||||| || || |||||||| | | |||||||| | || Sbjct 30406 AAGGTACGACCGTCCTCTAGCTGTTTTCCAGCGAATATAAGCCTTTGCTGGTCTGGAGGT 30465 Query 46487 ACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCG-CCACCGTGTCG---CTCGATTC 46542 | || ||| || ||| ||| || ||||| ||| | | | |||||| ||| || Sbjct 30466 ATGCCCTCTTTATCCTGGATTTTTGCCTTGA-CGTTGTCGATGGTGTCGGAACTC---TC 30521 Query 46543 CACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 || || | |||||||| ||||| || || || || |||||||| ||||| Sbjct 30522 GACCTCGAGAGTGATGGTCTTGCCGGTGAGTGTCTTCACAAAGATCTGCAT 30572 Score = 104 bits (114), Expect = 3e-17 Identities = 163/232 (70%), Gaps = 6/232 (3%) Strand=Plus/Plus Query 46365 TGCCTCCTCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGG 46424 |||| ||||| ||||| | |||| || | ||| |||||| |||||||||||||||| Sbjct 30116 TGCCACCTCTCAAACGTAGGACCAAGTGTAGGGTAGACTCCTTCTGGATATTGTAGTCGG 30175 Query 46425 ATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCG 46484 || || || |||| |||||||| || || ||||| || | | ||||||||| | | Sbjct 30176 CAAGGGTACGACCGTCCTCGAGCTGTTTTCCAGCGAAGATGAGCCTCTGCTGGTCTGGGG 30235 Query 46485 GCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCGCCACCGTGTC---GCTCGATT 46541 | | | ||||||||| || ||| ||||| | | | ||||| ||| || Sbjct 30236 GAATTCCCTCCTTGTCTTGAATTTTCGCCTTGACATTGTCGATGGTGTCAGAGCT---TT 30292 Query 46542 CCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 | || || | |||||||| || || || || || || |||||||| ||||| Sbjct 30293 CGACTTCAAGGGTGATGGTCTTACCGGTGAGGGTCTTCACAAAGATCTGCAT 30344 Score = 98.7 bits (108), Expect = 1e-15 Identities = 150/211 (71%), Gaps = 2/211 (1%) Strand=Plus/Plus Query 46384 CACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTC 46443 ||||| || | ||| |||||| |||||||||||||| | || || || | || || Sbjct 22697 CACCAAGTGGAGGGTAGACTCCTTCTGGATATTGTAGTCAGCAAGGGTACGACCATCCTC 22756 Query 46444 GAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCAT 46503 |||||| || |||||||| || | | ||||||||| | || | | |||||| ||| Sbjct 22757 GAGCTGTTTCCCGGCGAAGATGAGCCTCTGCTGGTCTGGAGGGATTCCCTCCTTATCCTG 22816 Query 46504 GATCTTCTTCTTGAGCGTCG-CCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTT 46562 ||||| ||||| ||| | | | |||||| ||| || || | |||||||| | Sbjct 22817 AATCTTAGCCTTGA-CGTTGTCGATGGTGTCGGAGCTTTCGACCTCAAGAGTGATGGTCT 22875 Query 46563 TGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 |||| || || || || |||||||| ||||| Sbjct 22876 TGCCAGTAAGAGTCTTCACAAAGATCTGCAT 22906 Score = 96.9 bits (106), Expect = 4e-15 Identities = 150/213 (70%), Gaps = 6/213 (3%) Strand=Plus/Plus Query 46384 CACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTC 46443 ||||| || | ||| |||||| ||||| || || || | ||| || ||| | || || Sbjct 29679 CACCAAGTGGAGGGTAGACTCCTTCTGGATGTTATAATCAGCTAGGGTACGCCCATCCTC 29738 Query 46444 GAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCAT 46503 ||||| || ||||| || ||||| | ||||||||||| || | | ||||| ||| Sbjct 29739 AAGCTGTTTCCCGGCAAAGATCAACCTCTGCTGGTCGGGGGGAATACCTTCCTTATCCTG 29798 Query 46504 GATCTTCTTCTTGAGCGTCGCCACCGTGTC---GCTCGATTCCACATCCACCGTGATGGT 46560 ||||| ||| | | | | |||||| |||| ||||| |||| ||||| || Sbjct 29799 AATCTTAGCCTTCACGTTATCGATCGTGTCGGAGCTC---TCCACCTCCAAGGTGATAGT 29855 Query 46561 TTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 || || |||| |||||| || ||||||||||| Sbjct 29856 CTTCCCTGTCAACGTTTTGACGAAGATTTGCAT 29888 Score = 95.1 bits (104), Expect = 1e-14 Identities = 163/233 (70%), Gaps = 8/233 (3%) Strand=Plus/Plus Query 46365 TGCCTCCTCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGG 46424 |||| || || | ||| | ||||| || | || |||||| || ||||||||||| | Sbjct 42283 TGCCACCCCTGAGACGGAGGACCAGGTGGAGAGTGGACTCCTTCTGTATATTGTAGTCAG 42342 Query 46425 ATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCG 46484 ||| ||||| |||| |||||||| || ||||| || || | | ||||||||| | | Sbjct 42343 CTAGGGTGCGACCGTCCTCGAGCTGTTTACCGGCAAAGATGAGCCTCTGCTGGTCTGGAG 42402 Query 46485 GCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCG-CCACCGTGTC---GCTCGAT 46540 | | | |||||| ||| ||| || ||||| ||| | | | ||||| |||| Sbjct 42403 GAATTCCCTCCTTATCCTGGATTTTGGCCTTGA-CGTTGTCGATGGTGTCGGAGCTC--- 42458 Query 46541 TCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 || || || | || ||||| ||||| || || || || || || |||||||| Sbjct 42459 TCGACCTCGAGAGTAATGGTCTTGCCGGTGAGTGTCTTGACGAATATTTGCAT 42511 Score = 93.3 bits (102), Expect = 5e-14 Identities = 146/210 (70%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 46384 CACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTC 46443 ||||| || | ||| |||||| ||||| ||||| || | ||| || || |||| || Sbjct 22241 CACCAAGTGGAGGGTAGACTCCTTCTGGATGTTGTAATCAGCTAGGGTACGYCCGTCCTC 22300 Query 46444 GAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCAT 46503 ||||| || |||||||| || | | ||||||||| | || | | ||||||||| Sbjct 22301 AAGCTGTTTACCGGCGAAGATGAGCCTCTGCTGGTCTGGGGGAATCCCTTCCTTGTCCTG 22360 Query 46504 GATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTT 46563 ||||| ||||| | | | ||||| ||| || || | |||||||| || Sbjct 22361 AATCTTGGCCTTGACATTGTCAATGGTGTCAGAACTTTCAACCTCAAGGGTGATGGTCTT 22420 Query 46564 GCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 ||| || || || || |||||||||||||| Sbjct 22421 GCCAGTAAGAGTCTTGACAAAGATTTGCAT 22450 Score = 84.2 bits (92), Expect = 2e-11 Identities = 138/195 (71%), Gaps = 8/195 (4%) Strand=Plus/Plus Query 46403 TCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAAT 46462 ||||| ||||| || || |||| || || || | || || |||||||| ||||| || Sbjct 21804 TCCTTCTGGATGTTATAATCGGCAAGGGTACGTCCATCTTCAAGCTGCTTCCCGGCAAAG 21863 Query 46463 ATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTC 46522 ||||| | |||||| || | || | | ||||||||| |||||| ||||| ||| Sbjct 21864 ATCAACCTCTGCTGATCCGGGGGAATCCCTTCCTTGTCCTGGATCTTGGCCTTGA-CGTT 21922 Query 46523 GCCACC-GTGTCG---CTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTT 46578 | || ||||| ||| || || |||| ||||| || ||||| || || || || Sbjct 21923 GTCAATTGTGTCAGAACTC---TCGACCTCCAAAGTGATCGTCTTGCCGGTGAGGGTCTT 21979 Query 46579 AACAAAGATTTGCAT 46593 || ||||||||||| Sbjct 21980 CACGAAGATTTGCAT 21994 >seq1083 Length=90715 Score = 111 bits (122), Expect = 2e-19 Identities = 163/228 (71%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 46367 CCTCCTCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGAT 46426 || ||||||||||| | ||| ||||| | ||| |||||| || || |||||||||| | Sbjct 36349 CCGCCTCTTAAACGGAGCACGAGATGTAGAGTAGACTCCTTCTGTATGTTGTAGTCGGCT 36408 Query 46427 AGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGC 46486 | |||||| | || ||||| || || || || || || | | ||||| || | ||| Sbjct 36409 AAAGTGCGACCATCCTCGAGTTGTTTTCCAGCAAAGATGAGTCTTTGCTGATCTGGCGGG 36468 Query 46487 ACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCG-CCACCGTGTCGCTCGATTCCAC 46545 | || ||| |||||| || ||| || | ||| | | | |||||| |||||| Sbjct 36469 ATGCACTCTTTGTCCTGTATTTTCGATTTCA-CGTTGTCGATTGTGTCGGAGCCTTCCAC 36527 Query 46546 ATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 || | ||||||||||| || || || ||||| |||||||| ||||| Sbjct 36528 CTCGAGGGTGATGGTTTTTCCGGTTAGGGTTTTCACAAAGATCTGCAT 36575 >seq1646 Length=84127 Score = 105 bits (116), Expect = 8e-18 Identities = 154/214 (72%), Gaps = 8/214 (4%) Strand=Plus/Plus Query 46384 CACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTC 46443 ||||| || | ||| |||||| ||||| |||||||| | || || ||| | || || Sbjct 61660 CACCAAGTGGAGGGTAGACTCCTTCTGGATGTTGTAGTCAGCAAGGGTACGCCCATCCTC 61719 Query 46444 GAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCAT 46503 ||| ||||| |||||||| || | | ||||||||| | || | || |||||| || Sbjct 61720 GAGTTGCTTTCCGGCGAAGATGAGCCTCTGCTGGTCCGGGGGAATGCCCTCCTTATCTTG 61779 Query 46504 GATCTTCTTCTTGAGCGTCGCCACC-GTGTCG---CTCGATTCCACATCCACCGTGATGG 46559 |||||| ||||| ||| | || |||||| ||| || || || | ||||||| Sbjct 61780 AATCTTCGCCTTGA-CGTTGTCAATAGTGTCGGAACTC---TCAACCTCAAGGGTGATGG 61835 Query 46560 TTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 ||||||| || || || || |||||||| ||||| Sbjct 61836 TTTTGCCGGTAAGGGTCTTGACAAAGATCTGCAT 61869 Score = 105 bits (116), Expect = 8e-18 Identities = 141/195 (72%), Gaps = 6/195 (3%) Strand=Plus/Plus Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461 ||||||||||||||||||||| | ||| ||||| |||| |||||||| || ||||| || Sbjct 61906 CTCCTTTTGGATATTGTAGTCAGCTAGGGTGCGGCCGTCTTCGAGCTGTTTACCGGCAAA 61965 Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGT 46521 || | | ||||||||| | || | | ||| ||||| ||| ||| ||||| | Sbjct 61966 GATGAGCCTCTGCTGGTCTGGTGGGATACCCTCTTTGTCTTGGATTTTCGCCTTGACATT 62025 Query 46522 CGCCACCGTGTC---GCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTT 46578 | | ||||| ||| ||| || |||| || ||||| || || || || || || Sbjct 62026 GTCAATGGTGTCAGAGCT---TTCAACTTCCAAGGTAATGGTCTTTCCGGTGAGAGTCTT 62082 Query 46579 AACAAAGATTTGCAT 46593 |||||||||||||| Sbjct 62083 TACAAAGATTTGCAT 62097 Score = 98.7 bits (108), Expect = 1e-15 Identities = 160/228 (70%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 46367 CCTCCTCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGAT 46426 || ||||| ||||| | |||| || | || |||||||| |||||||||||||||| | Sbjct 62099 CCACCTCTCAAACGTAGGACCAAGTGTAGGGTGCTCTCCTTCTGGATATTGTAGTCGGCT 62158 Query 46427 AGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGC 46486 || || || | || || | |||||| ||||| || || | | ||||||||| | || Sbjct 62159 AGGGTACGACCATCTTCTAACTGCTTTCCGGCAAAGATGAGCCTCTGCTGGTCTGGGGGA 62218 Query 46487 ACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCG-CCACCGTGTCGCTCGATTCCAC 46545 | | ||| || ||| || || ||||| ||| | | | || ||| ||| || Sbjct 62219 ATACCCTCTTTATCCTGAATTTTAGCCTTGA-CGTTGTCGATGGTATCGGAGCTTTCGAC 62277 Query 46546 ATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 || | |||||||| ||||| || || || || |||||||| ||||| Sbjct 62278 CTCGAGAGTGATGGTCTTGCCGGTGAGAGTCTTCACAAAGATCTGCAT 62325 Score = 95.1 bits (104), Expect = 1e-14 Identities = 138/194 (71%), Gaps = 6/194 (3%) Strand=Plus/Plus Query 46403 TCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAAT 46462 ||||||||||| || ||||| | || || ||| | || || ||||| || ||||| || Sbjct 61451 TCCTTTTGGATGTTATAGTCAGCAAGGGTACGCCCATCCTCAAGCTGTTTCCCGGCAAAG 61510 Query 46463 ATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTC 46522 ||||| | ||||||||| | || | | ||| ||||| ||||| ||||| | Sbjct 61511 ATCAACCTCTGCTGGTCTGGAGGAATTCCCTCTTTGTCTTGAATCTTGGCCTTGACATTA 61570 Query 46523 GCCACCGTGTC---GCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTA 46579 | | ||||| |||| ||||| |||| ||||| || ||||| || ||||| || Sbjct 61571 TCAATGGTGTCGGAGCTC---TCCACCTCCAAGGTGATCGTCTTGCCGGTTAGCGTCTTG 61627 Query 46580 ACAAAGATTTGCAT 46593 || ||||||||||| Sbjct 61628 ACGAAGATTTGCAT 61641 >seq1470 Length=49555 Score = 100 bits (110), Expect = 3e-16 Identities = 161/230 (70%), Gaps = 6/230 (3%) Strand=Plus/Minus Query 46367 CCTCCTCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGAT 46426 || ||||| ||||| | |||| ||||| ||||||||||| ||||| |||||||||| Sbjct 30842 CCACCTCTCAAACGTAGGACCAAGTGCAAGGTACTCTCCTTCTGGATGTTGTAGTCGGCA 30783 Query 46427 AGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGC 46486 || || || | || || ||||| || ||||| || || | | ||||||||| | || Sbjct 30782 AGGGTACGACCATCCTCAAGCTGTTTTCCGGCAAAGATGAGCCTCTGCTGGTCTGGAGGG 30723 Query 46487 ACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCGCCACCGTGTC---GCTCGATTCC 46543 | | |||||| || ||| || ||| | | | | ||||| |||| || Sbjct 30722 ATTCCCTCCTTATCTTGGATTTTTGCCTTAACGTTATCAATGGTGTCGGAGCTC---TCG 30666 Query 46544 ACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 || || | |||||||| ||||| || || || || |||||||| ||||| Sbjct 30665 ACCTCGAGAGTGATGGTCTTGCCGGTGAGTGTCTTCACAAAGATCTGCAT 30616 Score = 87.8 bits (96), Expect = 2e-12 Identities = 136/192 (71%), Gaps = 2/192 (1%) Strand=Plus/Minus Query 46403 TCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAAT 46462 ||||| ||||| |||||||| | || || ||| | || || ||||| || ||||| || Sbjct 31034 TCCTTCTGGATGTTGTAGTCAGCAAGGGTACGCCCATCCTCAAGCTGTTTCCCGGCAAAG 30975 Query 46463 ATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTC 46522 ||||| | |||||||| | || | | ||||||||| |||||| ||||| ||| Sbjct 30974 ATCAACCTTTGCTGGTCTGGGGGAATCCCTTCCTTGTCCTGGATCTTGGCCTTGA-CGTT 30916 Query 46523 GCCACC-GTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAAC 46581 | || |||||| ||| || || | ||||| || || || || || || || || Sbjct 30915 GTCAATAGTGTCGGAACTTTCGACTTCGAGGGTGATCGTCTTTCCAGTGAGGGTCTTCAC 30856 Query 46582 AAAGATTTGCAT 46593 ||||||||||| Sbjct 30855 GAAGATTTGCAT 30844 >seq771 Length=161796 Score = 100 bits (110), Expect = 3e-16 Identities = 150/212 (71%), Gaps = 6/212 (3%) Strand=Plus/Minus Query 46385 ACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCG 46444 |||| ||||| ||||||||||| ||||| ||||| |||| || || ||| | || || Sbjct 43478 ACCAAGTGCAAGGTACTCTCCTTCTGGATGTTGTAATCGGCTACGGTACGCCCATCCTCA 43419 Query 46445 AGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATG 46504 ||||| || ||||| |||||||| | ||||||||| | || | | ||| ||||| | Sbjct 43418 AGCTGTTTCCCGGCAAATATCAACCTCTGCTGGTCTGAGGGAATTCCCTCTTTGTCTTGG 43359 Query 46505 ATCTTCTTCTTGAGCGTCGCCACCGTGTCG---CTCGATTCCACATCCACCGTGATGGTT 46561 || || ||||| || | | |||||| ||| || || |||| || | ||| Sbjct 43358 ATTTTAGCCTTGACGTTCTCGATGGTGTCGGAACTC---TCGACTTCCAAAGTTACGGTC 43302 Query 46562 TTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 || || || || || || || ||||| ||||| Sbjct 43301 TTTCCTGTGAGGGTATTCACGAAGATCTGCAT 43270 Score = 95.1 bits (104), Expect = 1e-14 Identities = 162/231 (70%), Gaps = 8/231 (3%) Strand=Plus/Minus Query 46367 CCTCCTCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGAT 46426 || ||||| ||||| | |||| || | || ||||||||||||||| ||||| | Sbjct 43268 CCACCTCTCAAACGTAGGACCAAGTGTAGGGTGGACTCCTTTTGGATATTATAGTCAGCA 43209 Query 46427 AGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGC 46486 || || || ||| || ||||| || ||||| || || | | ||||||||| | || Sbjct 43208 AGGGTACGACTGTCCTCAAGCTGTTTTCCGGCAAAGATGAGCCTCTGCTGGTCTGGAGGG 43149 Query 46487 ACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCG-CCACCGTGTC---GCTCGATTC 46542 | | |||||| ||| |||||| ||| | ||| | | | ||||| |||| || Sbjct 43148 ATACCCTCCTTATCCTGGATCTTGGCCTT-AACGTTGTCGATGGTGTCTGAGCTC---TC 43093 Query 46543 CACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 || || | |||||||| ||||| || || || ||||||||||| ||||| Sbjct 43092 GACCTCGAGAGTGATGGTCTTGCCGGTGAGTGTCTTAACAAAGATCTGCAT 43042 >seq139 Length=432677 Score = 89.7 bits (98), Expect = 6e-13 Identities = 159/231 (69%), Gaps = 6/231 (3%) Strand=Plus/Plus Query 46367 CCTCCTCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGAT 46426 || || || || || | ||| || || | ||| |||||||| || ||||| || | Sbjct 178332 CCGCCCCTCAACCGGAGCACAAGGTGAAGGGTAGATTCCTTTTGAATGTTGTAATCAGCA 178391 Query 46427 AGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGC 46486 || ||||| |||| ||||||||||| ||||| || || | | |||||| || | ||| Sbjct 178392 AGGGTGCGTCCGTCCTCGAGCTGCTTCCCGGCAAAGATGAGCCTCTGCTGATCTGGCGGA 178451 Query 46487 ACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCGCCACCGTGTC---GCTCGATTCC 46543 | | ||||||||| ||||| |||||| | | | || || |||| || Sbjct 178452 ATACCCTCCTTGTCTTGAATCTTTGTCTTGACATTATCGATGGTATCCGAGCTC---TCA 178508 Query 46544 ACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCATT 46594 || || | || || || || || || || ||||| ||||||||||||||| Sbjct 178509 ACCTCTAGAGTAATAGTCTTTCCAGTGAGGGTTTTCACAAAGATTTGCATT 178559 Score = 84.2 bits (92), Expect = 2e-11 Identities = 150/218 (69%), Gaps = 6/218 (3%) Strand=Plus/Plus Query 46379 CGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCG 46438 || || |||| ||| | || ||| || || || |||||||| | || ||| || | Sbjct 177660 CGTAAAACCAAATGAAGAGTGGACTCTTTCTGAATGTTGTAGTCAGCTAAAGTCCGTCCA 177719 Query 46439 TCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTG 46498 || || | ||| || || || ||||||| | ||||||||| | || | | |||||| Sbjct 177720 TCTTCCAACTGTTTACCAGCAAATATCAGCCTCTGCTGGTCTGGTGGGATCCCCTCCTTA 177779 Query 46499 TCCATGATCTTCTTCTTGAGCGTCGCCACCGTGTCG---CTCGATTCCACATCCACCGTG 46555 || ||||| ||| | | | | ||||| ||| ||||| |||| ||| Sbjct 177780 TCTTGAATCTTAGCCTTCACATTATCAATAGTGTCTGAACTC---TCCACCTCCAATGTG 177836 Query 46556 ATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 || ||||| ||||||| ||| ||||||||||||||||| Sbjct 177837 ATCGTTTTCCCCGTCAACGTCTTAACAAAGATTTGCAT 177874 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 565176534657120