Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Primula_20veris_20[genbank_20GCA_5F000788445.1_202014-12-03] 8,756 sequences; 309,692,940 total letters Query= NC_013953.1 Length=156344 Score E Sequences producing significant alignments: (Bits) Value seq187 150 2e-31 seq1470 147 2e-30 seq260 134 1e-26 seq1646 132 5e-26 seq771 127 2e-24 seq1083 111 2e-19 seq139 104 2e-17 >seq187 Length=363338 Score = 150 bits (166), Expect = 2e-31 Identities = 165/217 (76%), Gaps = 2/217 (1%) Strand=Plus/Minus Query 38244 aTGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 |||||||| ||||| || || ||||| ||||| ||||||||| | || || ||| | || Sbjct 41827 ATGCAAATTTTCGTGAAGACCCTCACCGGCAAGACCATCACCTTGGAGGTGGAGAGCTCC 41768 Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362 |||| | | | |||| |||| | ||||| | || || |||||||||||| | || || Sbjct 41767 GACACCATCGACAACG-TTAAGGCGAAAATTCAAGATAAGGAGGGAATTCCCCCAGATCA 41709 Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422 |||| ||||||| | || || |||||||| || |||| || ||||| ||||||||| Sbjct 41708 ACAGAGGCTCATCTTTGCCGGTAAACAGCTTGAGGACGGACGTACCCTTGCCGACTACAA 41649 Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGT 38459 |||||| ||||| | || ||||| ||||| || ||| Sbjct 41648 CATCCAGAAGGAGTCTACCCTGCACTTGGTCCTACGT 41612 Score = 141 bits (156), Expect = 9e-29 Identities = 168/228 (74%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 38244 aTGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || || || || || ||||| || || ||||||||| | || ||||| | | Sbjct 30344 ATGCAGATCTTTGTGAAGACCCTCACCGGTAAGACCATCACCCTTGAAGTCGAAAGCTCT 30285 Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAA 38363 |||| | | | | | || | ||||| | ||||| |||||||||||| | ||||| Sbjct 30284 GACACCATCGACAATGTCAAGGCGAAAATTCAAGACAAGGAGGGAATTCCCCCAGACCAG 30225 Query 38364 CAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 38423 ||| ||||||| | ||| || |||||||| || |||| || ||||| ||||||||| Sbjct 30224 CAGAGGCTCATCTTCGCTGGAAAACAGCTCGAGGACGGTCGTACCCTTGCCGACTACAAT 30165 Query 38424 ATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGGC 38471 ||||| ||||| | || || || ||||| || ||||||||||| ||| Sbjct 30164 ATCCAGAAGGAGTCTACCCTACACTTGGTCCTACGTTTGAGAGGTGGC 30117 Score = 138 bits (152), Expect = 1e-27 Identities = 177/241 (73%), Gaps = 5/241 (2%) Strand=Plus/Minus Query 38235 TTTaaaaaa---aTGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGAC 38291 |||||| || |||||||||||||| || || ||||| ||||| ||||| || |||| Sbjct 42523 TTTAAATAACAGATGCAAATATTCGTCAAGACACTCACCGGCAAGACCATTACTCTCGAG 42464 Query 38292 GTCGAGGCCACCGACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAAT 38350 |||||| | |||||| | | | |||| | || | ||||||| || || |||||||| Sbjct 42463 GTCGAGAGCTCCGACACCATCGACAACG-TCAAGGCCAAAATCCAGGATAAGGAGGGAAT 42405 Query 38351 TCCCGCCGACCAACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCT 38410 ||| | ||||| ||| ||||||| | || || |||||||| || |||| |||||||| Sbjct 42404 TCCTCCAGACCAGCAGAGGCTCATCTTTGCCGGTAAACAGCTCGAGGACGGTCGCACCCT 42345 Query 38411 CAACGACTACAACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470 |||||||| || || ||||| | || || || |||| || ||| | || || || Sbjct 42344 AGCTGACTACAATATACAGAAGGAGTCCACTCTCCACCTGGTCCTCCGTCTCAGGGGTGG 42285 Query 38471 C 38471 | Sbjct 42284 C 42284 Score = 136 bits (150), Expect = 4e-27 Identities = 162/217 (75%), Gaps = 2/217 (1%) Strand=Plus/Minus Query 38244 aTGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 |||||||| || || || ||| | || ||||| ||||||||| | || || ||| | || Sbjct 22222 ATGCAAATCTTTGTCAAGACGTTGACCGGCAAGACCATCACCTTGGAGGTTGAGAGCTCC 22163 Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362 |||| | | | |||| | || | ||||| | ||||| |||||||||||| | || || Sbjct 22162 GACACCATAGACAACG-TCAAGGCCAAAATTCAAGACAAGGAGGGAATTCCCCCGGATCA 22104 Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422 ||| ||||||| | ||| || ||||||||||| |||| |||||||| || ||||| Sbjct 22103 GCAGAGGCTCATCTTCGCCGGTAAACAGCTGGAGGACGGCCGCACCCTAGCTGATTACAA 22044 Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGT 38459 |||||| ||||| || ||||| ||||| || ||| Sbjct 22043 CATCCAGAAGGAGAGTACCCTGCACTTGGTTCTACGT 22007 Score = 136 bits (150), Expect = 4e-27 Identities = 169/229 (74%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 38244 aTGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || ||||| || || || |||||||| ||||||||| |||| || ||| | || Sbjct 42283 ATGCAGATCTTCGTCAAGACCCTTACGGGCAAGACCATCACCCTCGAGGTGGAGAGCTCC 42224 Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362 |||| | | | |||| | || | ||||||| || || |||||||||||| | || || Sbjct 42223 GACACCATCGACAACG-TCAAGGCCAAAATCCAGGATAAGGAGGGAATTCCCCCGGATCA 42165 Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422 || ||||||| | || || |||||||| || || | || ||||| ||||||||| Sbjct 42164 GCAAAGGCTCATCTTTGCCGGAAAACAGCTCGAGGATGGACGTACCCTTGCCGACTACAA 42105 Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGGC 38471 |||||| ||||| | || || ||| |||| || ||| | || || ||| Sbjct 42104 CATCCAGAAGGAGTCCACTCTCCATCTGGTCCTCCGTCTCAGGGGTGGC 42056 Score = 125 bits (138), Expect = 7e-24 Identities = 165/229 (72%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 38243 aaTGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCAC 38302 |||||| ||||| || || ||||| || || || ||||||||| | || || ||| | | Sbjct 22679 AATGCAGATATTTGTCAAGACGCTTACTGGAAAGACCATCACCTTGGAGGTGGAGAGCTC 22620 Query 38303 CGACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362 ||||| | | | | |||||| || || | ||||| || || |||||| | || || Sbjct 22619 CGACACCATAGACAATGTTAAAGCCAAGATTCAGGACAAGGAAGGGATTCCCCCGGATCA 22560 Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422 ||| ||||||| | || || |||||||| || |||| || || || |||||||| Sbjct 22559 GCAGAGGCTCATCTTTGCCGGAAAACAGCTCGAGGACGGTCGTACGCTAGCTGACTACAA 22500 Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGGC 38471 ||||| |||||| || | || ||||| || ||||||||||| ||| Sbjct 22499 TATCCAGAAGGAAAGTACCTTACACTTGGTCCTACGTTTGAGAGGTGGC 22451 Score = 125 bits (138), Expect = 7e-24 Identities = 166/228 (73%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 38244 aTGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || || || || || || |||||||| ||||||||| |||| || ||| || Sbjct 30116 ATGCAGATCTTTGTCAAGACTCTTACGGGCAAGACCATCACCCTCGAGGTTGAGAGTTCC 30057 Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362 |||| | | | |||| | || | || || | |||||||| || || ||| | ||||| Sbjct 30056 GACACCATTGATAACG-TAAAGGCCAAGATTCAGGACAAAGAAGGGATCCCCCCAGACCA 29998 Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422 || ||||||| | ||| ||||| || || || |||| || ||||| |||||||| Sbjct 29997 GCAAAGGCTCATCTTCGCCGGCAAGCAACTTGAGGACGGACGTACCCTTGCTGACTACAA 29938 Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470 |||||| |||||| | || || || |||||||| | ||||| || || Sbjct 29937 CATCCAGAAGGAATCTACCCTCCACTTGGTGCTCAGGTTGAGGGGTGG 29890 Score = 125 bits (138), Expect = 7e-24 Identities = 166/228 (73%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 38244 aTGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || || || || || ||||| ||||| |||||||| |||| |||||| || Sbjct 30572 ATGCAGATCTTTGTGAAGACACTCACCGGCAAGACCATCACTCTCGAGGTCGAGAGTTCC 30513 Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362 |||| | | | |||| | || | |||||||| || |||||||| || || | ||||| Sbjct 30512 GACACCATCGACAACG-TCAAGGCAAAAATCCAGGATAAAGAGGGCATACCTCCAGACCA 30454 Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422 || |||| || | ||| || |||||||| || |||| || ||| | ||||||||| Sbjct 30453 GCAAAGGCTTATATTCGCTGGAAAACAGCTAGAGGACGGTCGTACCTTGGCCGACTACAA 30394 Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470 |||||||||||| || || ||| |||| || ||| | || || || Sbjct 30393 TATCCAAAAGGAAAGTACCCTTCATCTGGTCCTACGTCTCAGGGGTGG 30346 Score = 114 bits (126), Expect = 1e-20 Identities = 157/217 (72%), Gaps = 2/217 (1%) Strand=Plus/Minus Query 38244 aTGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 |||||||| ||||| |||||||| || || || || |||||| | || || ||| | || Sbjct 29660 ATGCAAATCTTCGTCAAAACGCTGACTGGGAAGACTATCACCTTGGAGGTGGAGAGCTCC 29601 Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362 |||| | | |||| | || | || || | || || ||||| |||||| | ||||| Sbjct 29600 GACACGATCGATAACG-TGAAGGCCAAGATTCAGGATAAGGAGGGTATTCCCCCTGACCA 29542 Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422 ||| || | || | || || |||||||| || || | ||| ||||| || ||||| Sbjct 29541 GCAGAGGTTGATCTTTGCCGGGAAACAGCTTGAGGATGGGCGTACCCTAGCTGATTACAA 29482 Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGT 38459 |||||| ||||| | || ||||| |||||||| ||| Sbjct 29481 CATCCAGAAGGAGTCTACTCTGCACTTGGTGCTCCGT 29445 Score = 111 bits (122), Expect = 2e-19 Identities = 163/228 (71%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 38244 aTGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || ||||| || || || ||||| || ||||| ||| | || || ||| | || Sbjct 42055 ATGCAGATCTTCGTCAAGACCCTTACGGGAAAGACCATTACCCTTGAGGTGGAGAGCTCC 41996 Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362 |||| | | | |||| | || | || || | ||||| || || |||||| | || || Sbjct 41995 GACACCATCGACAACG-TCAAGGCCAAGATTCAGGACAAGGAAGGGATTCCCCCGGATCA 41937 Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422 || ||||||| | || || |||||||| || |||| || ||||| ||||||||| Sbjct 41936 GCAAAGGCTCATCTTTGCCGGAAAACAGCTCGAGGACGGACGTACCCTTGCCGACTACAA 41877 Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470 |||||| ||||| | || || || ||||||| | ||||| || || Sbjct 41876 CATCCAGAAGGAGTCCACTCTCCACCTGGTGCTCAGGTTGAGGGGTGG 41829 Score = 109 bits (120), Expect = 5e-19 Identities = 160/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 38244 aTGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 |||||||| || || || || || || ||||| ||||||||| | || || || | Sbjct 22450 ATGCAAATCTTTGTCAAGACTCTTACTGGCAAGACCATCACCCTTGAGGTTGAAAGTTCT 22391 Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAA 38363 |||| | | | | | || | || || | ||||| || || |||||| | ||||| Sbjct 22390 GACACCATTGACAATGTCAAGGCCAAGATTCAGGACAAGGAAGGGATTCCCCCAGACCAG 22331 Query 38364 CAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 38423 ||| ||||||| | ||| || |||||||| || |||| || ||||| || |||||| Sbjct 22330 CAGAGGCTCATCTTCGCCGGTAAACAGCTTGAGGACGGRCGTACCCTAGCTGATTACAAC 22271 Query 38424 ATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470 ||||| ||||| | || || || |||||||| | ||||| || || Sbjct 22270 ATCCAGAAGGAGTCTACCCTCCACTTGGTGCTCAGGTTGAGGGGTGG 22224 >seq1470 Length=49555 Score = 147 bits (162), Expect = 2e-30 Identities = 171/228 (75%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 38244 aTGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || || || || || ||||| ||||| |||||||| |||| |||||| | || Sbjct 30616 ATGCAGATCTTTGTGAAGACACTCACCGGCAAGACCATCACTCTCGAGGTCGAGAGCTCC 30675 Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362 |||| | | | |||| |||| | |||||||| || || |||||||| || | ||||| Sbjct 30676 GACACCATTGATAACG-TTAAGGCAAAAATCCAAGATAAGGAGGGAATCCCTCCAGACCA 30734 Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422 ||| ||||||| | || || |||||||| || || | || ||||| ||||||||| Sbjct 30735 GCAGAGGCTCATCTTTGCCGGAAAACAGCTTGAGGATGGTCGTACCCTTGCCGACTACAA 30794 Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470 |||||| ||||| || |||| ||||| || ||||||||||| || Sbjct 30795 CATCCAGAAGGAGAGTACCTTGCACTTGGTCCTACGTTTGAGAGGTGG 30842 Score = 114 bits (126), Expect = 1e-20 Identities = 157/217 (72%), Gaps = 2/217 (1%) Strand=Plus/Plus Query 38244 aTGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 |||||||| ||||| || || ||||| || || || |||||| |||| ||||| || Sbjct 30844 ATGCAAATCTTCGTGAAGACCCTCACTGGAAAGACGATCACCCTCGAAGTCGAAAGTTCC 30903 Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362 |||| | | |||| | || | || |||| ||||| || || |||||| | ||||| Sbjct 30904 GACACTATTGACAACG-TCAAGGCCAAGATCCAGGACAAGGAAGGGATTCCCCCAGACCA 30962 Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422 || || | || | || || |||||||| || || | ||| ||||| |||||||| Sbjct 30963 GCAAAGGTTGATCTTTGCCGGGAAACAGCTTGAGGATGGGCGTACCCTTGCTGACTACAA 31022 Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGT 38459 |||||| |||||| |||| || || ||||| || ||| Sbjct 31023 CATCCAGAAGGAATCGACCCTCCACTTGGTACTCCGT 31059 Score = 113 bits (124), Expect = 5e-20 Identities = 163/228 (71%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 38244 aTGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| |||||||| || || || ||||| || |||||||| | || ||||| || Sbjct 31072 ATGCAGATATTCGTCAAGACTCTTACGGGAAAGACCATCACTTTGGAGGTCGAAAGTTCC 31131 Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362 |||| | | |||| | || | || |||| ||||| || || |||||| | ||||| Sbjct 31132 GACACTATTGATAACG-TCAAGGCCAAGATCCAGGACAAGGAAGGGATTCCCCCAGACCA 31190 Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422 ||| || | || | || || |||||||| || |||| || || || ||||||||| Sbjct 31191 GCAGAGGTTGATCTTTGCCGGGAAACAGCTTGAGGACGGACGTACYCTTGCCGACTACAA 31250 Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470 |||||| ||||| | || || || |||||||| | ||||| || || Sbjct 31251 CATCCAGAAGGAGTCTACCCTCCACTTGGTGCTCAGGTTGAGGGGTGG 31298 >seq260 Length=279698 Score = 134 bits (148), Expect = 1e-26 Identities = 168/228 (74%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 38244 aTGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || || || || || ||||| ||||| |||||||| | || |||||| | | Sbjct 162774 ATGCAGATCTTTGTGAAGACACTCACTGGCAAGACCATCACTCTGGAGGTCGAGAGCTCA 162715 Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362 |||| | | | |||| |||| | |||||||| || ||||||||||| || | ||||| Sbjct 162714 GACACCATCGACAACG-TTAAGGCAAAAATCCAAGATAAAGAGGGAATCCCTCCAGACCA 162656 Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422 || | ||||| | ||| || |||||||| || || | || ||||| |||||| || Sbjct 162655 GCAAAGACTCATCTTCGCTGGAAAACAGCTCGAGGATGGTCGTACCCTTGCCGACTATAA 162596 Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470 |||||| |||||| || || || ||||| || ||||| ||||| || Sbjct 162595 CATCCAGAAGGAAAGTACCCTACACTTGGTCCTACGTTTAAGAGGTGG 162548 Score = 118 bits (130), Expect = 1e-21 Identities = 158/217 (73%), Gaps = 2/217 (1%) Strand=Plus/Minus Query 38244 aTGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 |||||||| ||||| || ||||| || ||||| ||||||||| | || || ||| | || Sbjct 162546 ATGCAAATCTTCGTCAAGACGCTGACCGGCAAGACCATCACCTTGGAGGTGGAGAGCTCC 162487 Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362 |||| | | | |||| | || | ||||| | || || |||||||||||| | ||||| Sbjct 162486 GACACCATCGACAACG-TCAAGGCCAAAATTCAAGATAAGGAGGGAATTCCCCCGGACCA 162428 Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422 ||| |||| || | ||| || || || || || || | || ||||| || ||||| Sbjct 162427 GCAGAGGCTGATCTTCGCCGGTAAGCAACTCGAGGATGGCCGTACCCTAGCTGATTACAA 162368 Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGT 38459 |||||| ||||| || ||||| ||||| || ||| Sbjct 162367 CATCCAGAAGGAGAGTACCCTGCACTTGGTCCTACGT 162331 >seq1646 Length=84127 Score = 132 bits (146), Expect = 5e-26 Identities = 159/216 (74%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 38244 aTGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 |||||||| ||||| || ||||| || ||||| || |||||| | || || ||| | || Sbjct 61641 ATGCAAATCTTCGTCAAGACGCTAACCGGCAAGACGATCACCTTGGAGGTGGAGAGCTCC 61582 Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAA 38363 |||| | | | | | || | || || | ||||||||||||||||| | ||||| Sbjct 61581 GACACCATTGATAATGTCAAGGCCAAGATTCAAGACAAAGAGGGAATTCCTCCAGACCAG 61522 Query 38364 CAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 38423 ||| || | || | || || |||||||| || || | ||| ||||| ||||| ||| Sbjct 61521 CAGAGGTTGATCTTTGCCGGGAAACAGCTTGAGGATGGGCGTACCCTTGCTGACTATAAC 61462 Query 38424 ATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGT 38459 |||||||||||| |||| || || |||||||| ||| Sbjct 61461 ATCCAAAAGGAATCGACCCTCCACTTGGTGCTCCGT 61426 Score = 131 bits (144), Expect = 2e-25 Identities = 176/240 (73%), Gaps = 4/240 (2%) Strand=Plus/Minus Query 38233 TCTTTaaaaaaaTGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACG 38292 |||| ||| | ||||| || || || || || ||||| ||||| |||||||| |||| | Sbjct 62336 TCTTGAAACAGATGCAGATCTTTGTGAAGACTCTCACCGGCAAGACCATCACTCTCGAGG 62277 Query 38293 TCGAGGCCACCGACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATT 38351 |||| | |||| | | | | |||| | || | ||||| | || |||||||| ||| Sbjct 62276 TCGAAAGCTCCGATACCATCGACAACG-TCAAGGCTAAAATTCAGGATAAAGAGGGTATT 62218 Query 38352 CCCGCCGACCAACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTC 38411 ||| | ||||| ||| ||||||| | || || || ||| | || || | || ||||| Sbjct 62217 CCCCCAGACCAGCAGAGGCTCATCTTTGCCGGAAAGCAGTTAGAAGATGGTCGTACCCTA 62158 Query 38412 AACGACTACAACATCCAAAAGGA-AGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470 ||||||||| ||||| ||||| ||| || || || ||||| || ||||||||||| || Sbjct 62157 GCCGACTACAATATCCAGAAGGAGAGC-ACCCTACACTTGGTCCTACGTTTGAGAGGTGG 62099 Score = 116 bits (128), Expect = 4e-21 Identities = 162/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 38244 aTGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 |||||||| || ||||| || ||||| || || ||||| ||| | || || || | | Sbjct 62097 ATGCAAATCTTTGTAAAGACTCTCACCGGAAAGACCATTACCTTGGAAGTTGAAAGCTCT 62038 Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAA 38363 |||| | | | | | || | ||||||| ||||||||||| || || | ||||| Sbjct 62037 GACACCATTGACAATGTCAAGGCGAAAATCCAAGACAAAGAGGGTATCCCACCAGACCAG 61978 Query 38364 CAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 38423 ||| ||||||| | || || |||||||| || |||| |||||||| |||||||| Sbjct 61977 CAGAGGCTCATCTTTGCCGGTAAACAGCTCGAAGACGGCCGCACCCTAGCTGACTACAAT 61918 Query 38424 ATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470 ||||||||||| | || || || |||| || || | ||||| || Sbjct 61917 ATCCAAAAGGAGTCCACCCTCCACCTGGTCCTCCGCCTCAGAGGTGG 61871 Score = 111 bits (122), Expect = 2e-19 Identities = 163/228 (71%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 38244 aTGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || || || || || || || ||||||||||||||| | || || ||| || Sbjct 61869 ATGCAGATCTTTGTCAAGACCCTTACCGGCAAAACCATCACCCTTGAGGTTGAGAGTTCC 61810 Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362 |||| | | |||| | || | || || | || || ||||| |||||| | ||||| Sbjct 61809 GACACTATTGACAACG-TCAAGGCGAAGATTCAAGATAAGGAGGGCATTCCCCCGGACCA 61751 Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422 ||| ||||||| | ||| || || || || || || | ||| ||||| |||||||| Sbjct 61750 GCAGAGGCTCATCTTCGCCGGAAAGCAACTCGAGGATGGGCGTACCCTTGCTGACTACAA 61691 Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470 |||||| ||||| | || || || |||||||| | ||||| || || Sbjct 61690 CATCCAGAAGGAGTCTACCCTCCACTTGGTGCTCAGGTTGAGGGGTGG 61643 >seq771 Length=161796 Score = 127 bits (140), Expect = 2e-24 Identities = 173/239 (72%), Gaps = 2/239 (1%) Strand=Plus/Plus Query 38233 TCTTTaaaaaaaTGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACG 38292 |||| || | ||||| || || || || || ||||| ||||| |||||||| |||| | Sbjct 43031 TCTTGAAGCAGATGCAGATCTTTGTTAAGACACTCACCGGCAAGACCATCACTCTCGAGG 43090 Query 38293 TCGAGGCCACCGACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATT 38351 ||||| | | |||| | | | |||| |||| | || |||| || || ||||| || Sbjct 43091 TCGAGAGCTCAGACACCATCGACAACG-TTAAGGCCAAGATCCAGGATAAGGAGGGTATC 43149 Query 38352 CCCGCCGACCAACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTC 38411 || | ||||| ||| ||||||| | || || |||||||| || ||| || ||||| Sbjct 43150 CCTCCAGACCAGCAGAGGCTCATCTTTGCCGGAAAACAGCTTGAGGACAGTCGTACCCTT 43209 Query 38412 AACGACTACAACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470 ||||| || ||||||||||| | || || || ||||| || ||||||||||| || Sbjct 43210 GCTGACTATAATATCCAAAAGGAGTCCACCCTACACTTGGTCCTACGTTTGAGAGGTGG 43268 Score = 111 bits (122), Expect = 2e-19 Identities = 163/228 (71%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 38244 aTGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || ||||| || || ||||| || || ||| | || | || |||||| || Sbjct 43270 ATGCAGATCTTCGTGAATACCCTCACAGGAAAGACCGTAACTTTGGAAGTCGAGAGTTCC 43329 Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362 |||| | | | |||| | || | ||||||| |||||||||||||||||| | ||||| Sbjct 43330 GACACCATCGAGAACG-TCAAGGCTAAAATCCAAGACAAAGAGGGAATTCCCTCAGACCA 43388 Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422 ||| || | || | || || |||||||| || || | ||| ||| | ||| ||||| Sbjct 43389 GCAGAGGTTGATATTTGCCGGGAAACAGCTTGAGGATGGGCGTACCGTAGCCGATTACAA 43448 Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470 |||||| ||||| || |||| ||||| || ||| | | ||||| Sbjct 43449 CATCCAGAAGGAGAGTACCTTGCACTTGGTTCTACGTCTCCGTGGCGG 43496 >seq1083 Length=90715 Score = 111 bits (122), Expect = 2e-19 Identities = 165/229 (72%), Gaps = 4/229 (2%) Strand=Plus/Minus Query 38244 aTGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || || || ||||| || || || |||||||||||| |||| || || | | || Sbjct 36575 ATGCAGATCTTTGTGAAAACCCTAACCGGAAAAACCATCACCCTCGAGGTGGAAGGCTCC 36516 Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCC-GACC 38361 |||| | | |||| | ||| ||||| | ||||||||| | || |||||| || | Sbjct 36515 GACACAATCGACAACG-TGAAATCGAAAATACAGGACAAAGAGTGCAT-CCCGCCAGATC 36458 Query 38362 AACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACA 38421 | || | ||||| | || || ||||| || || || | ||||| | |||||||| Sbjct 36457 AGCAAAGACTCATCTTTGCTGGAAAACAACTCGAGGATGGTCGCACTTTAGCCGACTACA 36398 Query 38422 ACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470 |||| || ||||| | || || ||| | ||||| ||||| |||||||| Sbjct 36397 ACATACAGAAGGAGTCTACTCTACATCTCGTGCTCCGTTTAAGAGGCGG 36349 Score = 82.4 bits (90), Expect = 8e-11 Identities = 156/222 (70%), Gaps = 7/222 (3%) Strand=Plus/Minus Query 38244 aTGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 |||||||| || || ||||| ||||| ||||||||||| || | || ||||| | | Sbjct 36347 ATGCAAATCTTTGTGAAAACCCTCACTGGCAAAACCATTACTCTTGAGGTCGAAAACTCT 36288 Query 38304 GACA-GCGTGCAAACGCTTAAAGA-AAAAATCCTCGACAAAGAGGGAATTCCCGCC-GAC 38360 |||| || |||| | |||| || || | || ||| | || | ||||||| || Sbjct 36287 GACACAATTGATAACG--TGAAGACGAAGATACAGGATAAAAAAGGGA-TCCCGCCAGAT 36231 Query 38361 CAAC-AGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTA 38419 |||| | |||| || | ||||| |||||||| || || | || || ||| || || Sbjct 36230 CAACAAAAGGCTTATCTTTGCGGGTAAACAGCTCGAGGATGGTCGTACTCTCGCAGATTA 36171 Query 38420 CAACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTT 38461 | ||| |||||||| | ||||| ||| | ||||| ||||| Sbjct 36170 TACCATTCAAAAGGAGTCTACGCTTCATCTTGTGCTTCGTTT 36129 >seq139 Length=432677 Score = 104 bits (114), Expect = 2e-17 Identities = 159/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 38244 aTGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || || || || || | || ||||| |||||||| | || |||||| | Sbjct 178102 ATGCAGATTTTTGTTAAGACCTTGACTGGCAAGACCATCACTCTTGAGGTCGAGAGTTCT 178043 Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAA 38363 || | | | | |||| | ||| |||| || |||||||| ||||| | || || Sbjct 178042 GATACAATCGATAATGTTAAGGCAAAGATCCAGGATAAAGAGGGTATTCCTCCAGATCAG 177983 Query 38364 CAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 38423 ||| |||| |||| ||| || || ||||| || |||| || || || || |||| | Sbjct 177982 CAGAGGCTGATTTTCGCCGGAAAGCAGCTAGAGGACGGTCGTACACTTGCAGATTACAGC 177923 Query 38424 ATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470 || || ||||| |||| || ||||||||||| |||||||| || || Sbjct 177922 ATACAGAAGGAGTCGACACTTCATTTGGTGCTCCGTTTGAGGGGAGG 177876 Score = 95.1 bits (104), Expect = 1e-14 Identities = 157/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 38244 aTGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| ||||| || ||||| || || || || || || ||| |||| || || | Sbjct 178786 ATGCAGATATTTGTCAAAACCCTTACCGGAAAGACTATAACCCTCGATGTGGAAAGTCCT 178727 Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAA 38363 || | || ||| | ||| ||||| | ||||||||||| || || | || || Sbjct 178726 GATACTGTCGAAAGTGTCAAATCCAAAATACAAGACAAAGAGGGCATCCCGACAGATCAG 178667 Query 38364 CAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 38423 ||| |||| || | || || || ||||| || || | || ||||| ||||||||| Sbjct 178666 CAGAGGCTAATCTTTGCTGGAAAGCAGCTCGAGGATGGCCGAACCCTAGCTGACTACAAC 178607 Query 38424 ATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470 || || |||||| | || || ||| ||||||| ||| | ||||| || Sbjct 178606 ATTCAGAAGGAATCAACCCTTCATCTGGTGCTCCGTCTTAGAGGTGG 178560 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 500118056087040