Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Primula_20veris_20[genbank_20GCA_5F000788445.1_202014-12-03] 8,756 sequences; 309,692,940 total letters Query= NC_014766.1 Length=194022 Score E Sequences producing significant alignments: (Bits) Value seq132 125 9e-24 seq1305 104 3e-17 >seq132 Length=337084 Score = 125 bits (138), Expect = 9e-24 Identities = 234/337 (69%), Gaps = 10/337 (3%) Strand=Plus/Plus Query 15918 TCAAGGATATCAACGCGATTCGTTGCGGCGATGACAACAATACC--TGTTTCGTTATCAA 15975 ||||| ||||| | ||||| ||||| || || |||| ||||| |||||| || ||| Sbjct 93201 TCAAGAATATCTGCACGATTAGTTGCTGCAATTACAATGATACCGGTGTTTCCTT--CAA 93258 Query 15976 AACCATCCATCTCTGTCAAAAGCTGGTTAATAGTTTGTTCCCGTTCATCATTCGCTGGCA 16035 |||| ||||| || |||||||| ||||||| || || |||| |||||| || || | Sbjct 93259 AACCGTCCATTTCAGTCAAAAGTTGGTTAAGTGTCTGCTCCCTTTCATCGTTTCCT--CC 93316 Query 16036 TACCA--CCAGCACTGCGTTGCTTTCCCACGGCATCAATCTCATCAATGAAGACGATGCA 16093 | | | |||| | | | | | || || || ||||| || |||| || || || || Sbjct 93317 TCCAATCCCAGTTCCTCTTGACCTCCCAACAGCGTCAATTTCGTCAACAAACACAATACA 93376 Query 16094 TGGTTGATTTTCGCGAGCGACTTCAAAGAGATCCCGTACACGCTTGGCGCCCACACCAAC 16153 |||| || || ||| || ||| ||||| || || | || || |||||||| Sbjct 93377 TGGTGCGTTCTCCTTAGCCTTTTTAAAAAGATCACGAACTCTAGAAGCACCAACACCAAC 93436 Query 16154 AAACATCTCCACAAAGTTTGCGGCGGAACATTG-GATGAAGGGGACATTAGATTCACCCG 16212 ||||||||| ||||| | || | ||| || | || ||| || ||| || ||| || | Sbjct 93437 AAACATCTCAACAAACTCTGAACCAGAA-ATGGAGAAGAACGGCACACCAGCTTCTCCTG 93495 Query 16213 CAATGGCTCGGGCGAGAAGAGTCTTACCCGTACCTGG 16249 |||| || || | ||||||||| || || ||||| Sbjct 93496 CAATTGCCTTTGCCAAAAGAGTCTTCCCAGTTCCTGG 93532 >seq1305 Length=68372 Score = 104 bits (114), Expect = 3e-17 Identities = 229/337 (68%), Gaps = 10/337 (3%) Strand=Plus/Plus Query 15918 TCAAGGATATCAACGCGATTCGTTGCGGCGATGACAACAATACCTGT--TTCGTTATCAA 15975 ||||| ||||| | || || || || || || |||| || ||||| ||| || | | Sbjct 45395 TCAAGAATATCTGCACGGTTAGTAGCTGCAATTACAATAACGCCTGTGTTTCCTT--CGA 45452 Query 15976 AACCATCCATCTCTGTCAAAAGCTGGTTAATAGTTTGTTCCCGTTCATCATTCGCTGGCA 16035 |||| ||||| || || || || ||||||| ||| ||||| | |||||||| || | Sbjct 45453 AACCGTCCATTTCAGTTAAGAGTTGGTTAAGAGTCTGTTCTCTCTCATCATTTCCT--CC 45510 Query 16036 TACCA--CCAGCACTGCGTTGCTTTCCCACGGCATCAATCTCATCAATGAAGACGATGCA 16093 | | | |||| | ||||| |||| || ||||| || ||||||| || || || || Sbjct 45511 TCCAATTCCAGTTCCTCGTTGTCTTCCAACAGCATCGATTTCATCAACAAATACAATACA 45570 Query 16094 TGGTTGATTTTCGCGAGCGACTTCAAAGAGATCCCGTACACGCTTGGCGCCCACACCAAC 16153 ||| ||| || || || ||| || || || || || || || |||||||| Sbjct 45571 TGGAGCATTCTCCTTTGCTTTTTTAAAAAGGTCACGAACTCGAGAAGCACCGACACCAAC 45630 Query 16154 AAACATCTCCACAAAGTTTGCGGCGGAACATTG-GATGAAGGGGACATTAGATTCACCCG 16212 ||||||||| ||||| | | | | | || | || || || ||| || |||||| | Sbjct 45631 AAACATCTCAACAAACTCCGAACCAG-AGATAGAGAAAAAAGGAACACCAGCTTCACCAG 45689 Query 16213 CAATGGCTCGGGCGAGAAGAGTCTTACCCGTACCTGG 16249 |||| || || | |||||||| || || ||||| Sbjct 45690 CAATCGCCTTTGCCAAGAGAGTCTTTCCGGTTCCTGG 45726 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 620674459744320