Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Primula_20veris_20[genbank_20GCA_5F000788445.1_202014-12-03] 8,756 sequences; 309,692,940 total letters Query= NC_015569.1 Length=178563 Score E Sequences producing significant alignments: (Bits) Value seq116 98.7 1e-15 >seq116 Length=395782 Score = 98.7 bits (108), Expect = 1e-15 Identities = 167/240 (70%), Gaps = 4/240 (2%) Strand=Plus/Minus Query 84567 GCAACACAGATCCATGGACGCATACCGAGACGATATGAAAGTTCCCATTCACGACCCATG 84626 |||||| ||||| || ||||||| | ||| | ||||||||| |||||||||||| Sbjct 22918 GCAACAGCAATCCAAGGTTGCATACCCAAACGGAAACTAAGTTCCCACTCACGACCCATG 22859 Query 84627 TAAGCAAATGCACCAATCAGGAAGTGAAAGACAACAAGTTGATAAGGTCCACCATTATAT 84686 ||| | | |||||| | |||||| | |||| |||| | |||| |||||||| | | Sbjct 22858 TAACAAGCTACACCAAGTAAGAAGTGTAGAACAATTAGTTCACAAGGACCACCATTGTGT 22799 Query 84687 AGCCATTCGTC--CATAC--TTGCTGCTTCCCAAATAGGATAGAAATGTAGACCAATAGC 84742 | |||||| || | || | |||||||| || || || || || | ||||||||| Sbjct 22798 AACCATTCATCAACGGACGGACGTAGCTTCCCATATTGGGTAAAAGTGCAAACCAATAGC 22739 Query 84743 ATTAGAGGATGGAACTACGGCACCAGAAATGATGTTGTTTCCGTACATGAGAGAACCAGC 84802 ||| || | | || | ||||| || || |||||||| | ||||| ||||| Sbjct 22738 TGCAGAACTATAAATAATGACATCGGAAATAATATTATTTCCGTAAAGTAGAGATCCAGC 22679 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 571211074104480