Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Primula_20veris_20[genbank_20GCA_5F000788445.1_202014-12-03]
8,756 sequences; 309,692,940 total letters
Query= NC_016658.1
Length=47741
Score E
Sequences producing significant alignments: (Bits) Value
seq116 84.2 7e-12
>seq116
Length=395782
Score = 84.2 bits (92), Expect = 7e-12
Identities = 159/232 (69%), Gaps = 4/232 (2%)
Strand=Plus/Minus
Query 5797 AATCCATGGTCGCATTCCTAATCTGTAACTAAGTTCCCATTGGCGTCCCAAGTAAGCTGC 5856
|||||| ||| |||| || || | | ||||||||||||| | || |||| |||| ||
Sbjct 22910 AATCCAAGGTTGCATACCCAAACGGAAACTAAGTTCCCACTCACGACCCATGTAACAAGC 22851
Query 5857 GATACCAATAAGGAAGTGGAAGACGACGAGTTGGTATGGTCCTCCATTGTAAAGCCATTC 5916
| ||||| | |||||| | || | |||| | || || ||||||| | ||||||
Sbjct 22850 TACACCAAGTAAGAAGTGTAGAACAATTAGTTCACAAGGACCACCATTGTGTAACCATTC 22791
Query 5917 ATCGA--GATTG--GCTGCTTCCCAGATGGGATAGAAGTGTAACCCAATTGCGTTGGAGC 5972
||| | || | | |||||||| || || || ||||| || ||||| || || |
Sbjct 22790 ATCAACGGACGGACGTAGCTTCCCATATTGGGTAAAAGTGCAAACCAATAGCTGCAGAAC 22731
Query 5973 TGGGTACAACGGCTCCTGATATGATGTTGTTTCCATAGAGTAGAGATCCTGC 6024
| | || | | | || || || || ||||| || ||||||||||| ||
Sbjct 22730 TATAAATAATGACATCGGAAATAATATTATTTCCGTAAAGTAGAGATCCAGC 22679
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 152633727876216
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |