Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Primula_20veris_20[genbank_20GCA_5F000788445.1_202014-12-03] 8,756 sequences; 309,692,940 total letters Query= NC_019405.1 Length=215710 Score E Sequences producing significant alignments: (Bits) Value seq912 102 1e-16 >seq912 Length=70991 Score = 102 bits (112), Expect = 1e-16 Identities = 260/392 (66%), Gaps = 23/392 (6%) Strand=Plus/Plus Query 145526 GCCGTCGATCTGCTCGACGTTGAACACCAGATAGGACTTCAGGAACGGGATCATCCGCTC 145585 |||||||||||||||| |||||||||| | |||| |||||||| || || |||| Sbjct 5338 GCCGTCGATCTGCTCGGCGTTGAACACGACATAGCGTTTCAGGAAGGGAATACCGCGCTT 5397 Query 145586 GACGTCCTTGCCGTTGGCGTCCTTCTCGGTCTTCTTGAACTTCGAGGCGTAGACGATCAG 145645 ||| || | ||| | ||| || ||||||| || || | ||| ||||||| || Sbjct 5398 GACCTCATCGCCCGCGTCGTTCTCCTCGGTCCGCTCGATCCGGTTGGCATAGACGA-CA- 5455 Query 145646 TTCGGA---CTTCTCGCCCTTGCGGACCTGACCACCCAGGTCCCTGGCTTGGTTGTAGGT 145702 |||| |||||||||||||||||| ||| |||| | | || || ||| |||| Sbjct 5456 -ACGGAACCCTTCTCGCCCTTGCGGACGCAACCGCCCATTGCGATTGCCTGCTTGAAGGT 5514 Query 145703 CATCCAGGTCGGGTTGGTGTAGCCGCGCTCCTGGGCGGCGGCCCACAGGAGGACCACGTT 145762 || ||| |||| | |||||| | | |||||| |||||||| | ||||| Sbjct 5515 CAGCCAATGCGGGGCAGCGTAGCCCTTCGTCATGGCGGCAACCCACAGGGTCAGGACGTT 5574 Query 145763 GATCCCGGTGTAGCGCTGGCCGGTCACCCGGCG-GGGATAGATCGCCATGCCGGCCGAGG 145821 ||| || ||| |||| | ||| | |||||| ||| | || |||| Sbjct 5575 GATACCACGATAGGCAACGCCGTTGCTGCGGAGCGGGATA-TTCGGCGTG------GAGG 5627 Query 145822 CGCCGCCGGGAGCCGACCACGGCTTCAACCAGGGACGCACGCCAGCGTCGAGGGCGGTGA 145881 | ||| ||||| ||| |||| || || |||||| |||| || || Sbjct 5628 CACCG---------TTCCACGATTTCGACCAAGGCCGTGTGCCAGCCTCGATCATGGCGA 5678 Query 145882 TGATCTTGTCGGTGATCTTCTGATAGAGGTCG 145913 | |||| ||||||||| | |||||||| |||| Sbjct 5679 TCATCTGGTCGGTGATTTCCTGATAGACGTCG 5710 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 690068463739200