Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Primula_20veris_20[genbank_20GCA_5F000788445.1_202014-12-03] 8,756 sequences; 309,692,940 total letters Query= NC_019410.1 Length=221828 Score E Sequences producing significant alignments: (Bits) Value seq912 95.1 2e-14 >seq912 Length=70991 Score = 95.1 bits (104), Expect = 2e-14 Identities = 265/396 (67%), Gaps = 33/396 (8%) Strand=Plus/Plus Query 149676 CCGTCGATCTGCTCGACGTTGAACACCAGATAGGACTTCAGGAACGGGATCATCCGCTCG 149735 ||||||||||||||| |||||||||| | |||| |||||||| || || |||| | Sbjct 5339 CCGTCGATCTGCTCGGCGTTGAACACGACATAGCGTTTCAGGAAGGGAATACCGCGCTTG 5398 Query 149736 ACGTCCTTGCCGTTCGAGTC---CTTCTCGGTCTTCTTGAACTTGGAGGCGTAGACGATC 149792 || || | ||| || ||| || ||||||| || || | | ||| ||||||| | Sbjct 5399 ACCTCATCGCC---CGCGTCGTTCTCCTCGGTCCGCTCGATCCGGTTGGCATAGACGA-C 5454 Query 149793 AGTTCGGA---CTTCTCGCCCTTGCGGACCTGACCACCCAGGTCCCTGGCTTGGTTGTAG 149849 | |||| |||||||||||||||||| ||| |||| | | || || ||| || Sbjct 5455 A--ACGGAACCCTTCTCGCCCTTGCGGACGCAACCGCCCATTGCGATTGCCTGCTTGAAG 5512 Query 149850 GTCATCCAGGTTGGGTTGGTGTAACCGCGC-TCCTGCGCGGCGGCCCACAGGAGGACCAC 149908 |||| ||| ||| | ||| || | || || ||||| |||||||| | || Sbjct 5513 GTCAGCCAATGCGGGGCAGCGTAGCCCTTCGTCATG-GCGGCAACCCACAGGGTCAGGAC 5571 Query 149909 GTTGATCCCGGTGTAGCGCTGGCCCGTCAC-GCGGCGC-GGATAGATCGCCATGCCAGCC 149966 |||||| || ||| || |||| | |||| || ||||| ||| | || Sbjct 5572 GTTGATACCACGATAG-GCAACGCCGTTGCTGCGGAGCGGGATA-TTCGGCGTG------ 5623 Query 149967 GAGGCGCCGCCGGGAGCCGACCACGGCTTCAACCAGGGACGCACGCCAGCGTCGAGCGCG 150026 ||||| ||| ||||| ||| |||| || || |||||| |||| | | Sbjct 5624 GAGGCACCG---------TTCCACGATTTCGACCAAGGCCGTGTGCCAGCCTCGATCATG 5674 Query 150027 GCGACGATCTTGTCGGTGATCTTCTGATAGAGGTCG 150062 |||| |||| ||||||||| | |||||||| |||| Sbjct 5675 GCGATCATCTGGTCGGTGATTTCCTGATAGACGTCG 5710 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 709643920970880