Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Primula_20veris_20[genbank_20GCA_5F000788445.1_202014-12-03] 8,756 sequences; 309,692,940 total letters Query= NC_020835.1 Length=47325 Score E Sequences producing significant alignments: (Bits) Value seq116 80.6 8e-11 >seq116 Length=395782 Score = 80.6 bits (88), Expect = 8e-11 Identities = 126/180 (70%), Gaps = 4/180 (2%) Strand=Plus/Minus Query 18429 GCAACACAAATCCACGGGCGCATACCTAGTCTATAACTAAGTTCCCATTGTCGTCCCATG 18488 |||||| |||||| || ||||||| | | ||||||||||||| | || |||||| Sbjct 22918 GCAACAGCAATCCAAGGTTGCATACCCAAACGGAAACTAAGTTCCCACTCACGACCCATG 22859 Query 18489 TAAGCTGCGATGCCGATGAGAAAGTGGAACACAATGAGTTGATATGGTCCTCCGTTATAT 18548 ||| || | || | | ||||| | ||||| |||| | | || || || || | | Sbjct 22858 TAACAAGCTACACCAAGTAAGAAGTGTAGAACAATTAGTTCACAAGGACCACCATTGTGT 22799 Query 18549 AACCACTCGTC----GAGGGTTGCAGCTTCCCAGATTGGGTAGAAGTGAAGACCGATTGC 18604 ||||| || || || || | ||||||||| |||||||| ||||| | ||| || || Sbjct 22798 AACCATTCATCAACGGACGGACGTAGCTTCCCATATTGGGTAAAAGTGCAAACCAATAGC 22739 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 151302666291064