Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Primula_20veris_20[genbank_20GCA_5F000788445.1_202014-12-03] 8,756 sequences; 309,692,940 total letters Query= NC_020875.1 Length=182801 Score E Sequences producing significant alignments: (Bits) Value seq116 84.2 3e-11 >seq116 Length=395782 Score = 84.2 bits (92), Expect = 3e-11 Identities = 165/242 (68%), Gaps = 4/242 (2%) Strand=Plus/Plus Query 155122 GCTGGTTCTTTAATGTATGGTAACAACATCATCTCTGGTGCTGTTGTCCCTAGTTCAAAC 155181 ||||| ||| || | || || || || || || || | || || | |||||| Sbjct 22679 GCTGGATCTCTACTTTACGGAAATAATATTATTTCCGATGTCATTATTTATAGTTCTGCA 22738 Query 155182 GCAATTGGTCTCCACTTCTATCCTATTTGGGAAGCAGCAAC--TC--TTGATGAGTGGTT 155237 || |||||| | ||||| || || || |||||||| | | || ||||||| ||||| Sbjct 22739 GCTATTGGTTTGCACTTTTACCCAATATGGGAAGCTACGTCCGTCCGTTGATGAATGGTT 22798 Query 155238 GTACAATGGTGGTCCTTTCCAACTTGTAGTCTTCCACTTCCTTATCGGAATCACAGCATA 155297 ||||||||||||||| |||| | || | |||||| | | || | | || Sbjct 22799 ACACAATGGTGGTCCTTGTGAACTAATTGTTCTACACTTCTTACTTGGTGTAGCTTGTTA 22858 Query 155298 CTGTGGTCGTCAGTGGGAACTTTCTTACCGTCTTGGCATGCGTCCTTGGATCTGTGTTGC 155357 | |||||| ||||||||||| || |||| | || |||| |||||||| |||||| Sbjct 22859 CATGGGTCGTGAGTGGGAACTTAGTTTCCGTTTGGGTATGCAACCTTGGATTGCTGTTGC 22918 Query 155358 AT 155359 || Sbjct 22919 AT 22920 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 584771189787360