Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Primula_20veris_20[genbank_20GCA_5F000788445.1_202014-12-03] 8,756 sequences; 309,692,940 total letters Query= NC_021559.1 Length=179063 Score E Sequences producing significant alignments: (Bits) Value seq471 104 3e-17 >seq471 Length=100806 Score = 104 bits (114), Expect = 3e-17 Identities = 152/215 (71%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 73535 AATTTTTTAACTGCAGCAGTATCAACACCTGGTGATGCTATGGGTCATAGTCTATTGTTC 73594 ||||||||||| || ||||| || | |||| | || | | | ||| | | ||||| Sbjct 70226 AATTTTTTAACGGCTGCAGTTTCTATGCCTGCTAATAGTTTAGCACATTCTTTGTTGTTA 70285 Query 73595 CTTTGGGGACCAGAGGCACAAGGAGATCTTGTACGATGGTTTCAATTAGGTGGACTATGG 73654 || ||||| || | |||||||||||| || || |||| |||||| ||||| || ||| Sbjct 70286 CTCTGGGGTCCTAAAGCACAAGGAGATTTTACTCGTTGGTGTCAATTGGGTGGTCTGTGG 70345 Query 73655 AACTTTGTAGCATTACATGGAGTCTTTGGACTCATAGGTTTCATGCTTAGACAGTTTGAG 73714 | ||||| || | || || | || ||||| |||||||||||| | | || ||||| Sbjct 70346 ACTTTTGTTGCTCTCCACGGTGCTTTCGGACTAATAGGTTTCATGTTATGTCAATTTGAA 70405 Query 73715 ATTGCAGGACTTGTTGGGATACGTCCTTACAACGC 73749 |||| || ||| |||||||||| || || Sbjct 70406 CTTGCTCGATCTGTGTAATTACGTCCTTATAATGC 70440 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 572810898984480