Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Primula_20veris_20[genbank_20GCA_5F000788445.1_202014-12-03] 8,756 sequences; 309,692,940 total letters Query= NC_023442.1 Length=120420 Score E Sequences producing significant alignments: (Bits) Value seq139 172 4e-38 seq1083 149 5e-31 seq1646 123 2e-23 seq187 123 2e-23 seq260 111 1e-19 seq1470 105 5e-18 seq771 102 6e-17 >seq139 Length=432677 Score = 172 bits (190), Expect = 4e-38 Identities = 175/228 (77%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 29559 TCCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGC 29618 ||| || || | ||| ||||||| |||||| || ||||| || |||||||| || || || Sbjct 178559 TCCACCTCTAAGACGGAGCACCAGATGAAGGGTTGATTCCTTCTGAATGTTGTAGTCAGC 178618 Query 29619 AATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGG 29678 | ||| || ||| ||||| || || |||||| | || | || |||||||| | ||| Sbjct 178619 TAGGGTTCGGCCATCCTCGAGCTGCTTTCCAGCAAAGATTAGCCTCTGCTGATCTGTCGG 178678 Query 29679 AATACCCTCTTTGTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTAC 29738 || |||||||||||||||| ||| ||||||| |||| ||||| |||| | ||| || Sbjct 178679 GATGCCCTCTTTGTCTTGTATTTTGGATTTGACACTTTCGACAGTATCAGGACTTTCCAC 178738 Query 29739 TTCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 || || |||||||| || || || | |||||| |||||||||||||| Sbjct 178739 ATCGAGGGTTATAGTCTTTCCGGTAAGGGTTTTGACAAATATCTGCAT 178786 Score = 163 bits (180), Expect = 2e-35 Identities = 175/229 (76%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619 || |||||||| || ||||| | ||||| || ||||| ||||||||||| ||||| ||| Sbjct 178332 CCGCCCCTCAACCGGAGCACAAGGTGAAGGGTAGATTCCTTTTGAATGTTGTAATCAGCA 178391 Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679 | |||||| || ||||| || || || ||| | || | || |||||||| |||||| Sbjct 178392 AGGGTGCGTCCGTCCTCGAGCTGCTTCCCGGCAAAGATGAGCCTCTGCTGATCTGGCGGA 178451 Query 29680 ATACCCTCTTTGTCTTGTAATTTTTGT-TTGACAGTTTCTACAGTGTCAGAAAGTTCTAC 29738 |||||||| |||||||| ||| ||||| |||||| | || | || || || || || Sbjct 178452 ATACCCTCCTTGTCTTG-AATCTTTGTCTTGACATTATCGATGGTATCCGAGCTCTCAAC 178510 Query 29739 TTCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCATT 29787 || ||||| ||||| || ||||| | |||||| ||||| || |||||| Sbjct 178511 CTCTAGAGTAATAGTCTTTCCAGTGAGGGTTTTCACAAAGATTTGCATT 178559 Score = 158 bits (174), Expect = 9e-34 Identities = 171/227 (75%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619 |||||||||||||| |||||||||||||| || || || || || ||| | ||||| ||| Sbjct 177876 CCTCCCCTCAAACGGAGCACCAAATGAAGTGTCGACTCCTTCTGTATGCTGTAATCTGCA 177935 Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679 | || ||| || || || || || || || | |||| || |||||||| || ||| Sbjct 177936 AGTGTACGACCGTCCTCTAGCTGCTTTCCGGCGAAAATCAGCCTCTGCTGATCTGGAGGA 177995 Query 29680 ATACCCTCTTTGTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACT 29739 ||||||||||| || || | ||| || ||| | || | || |||||| || || Sbjct 177996 ATACCCTCTTTATCCTGGATCTTTGCCTTAACATTATCGATTGTATCAGAACTCTCGACC 178055 Query 29740 TCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 |||||||| || || |||||||| ||||| |||||||| |||||||| Sbjct 178056 TCAAGAGTGATGGTCTTGCCAGTCAAGGTCTTAACAAAAATCTGCAT 178102 Score = 120 bits (132), Expect = 2e-22 Identities = 165/228 (72%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619 ||||||| || || | ||||||||||| ||||| ||||| |||||||| || || || Sbjct 177648 CCTCCCCGCAGGCGTAAAACCAAATGAAGAGTGGACTCTTTCTGAATGTTGTAGTCAGCT 177707 Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679 | || || ||| || | ||||| |||||| |||||| || ||||| || || || Sbjct 177708 AAAGTCCGTCCATCTTCCAACTGTTTACCAGCAAATATCAGCCTCTGCTGGTCTGGTGGG 177767 Query 29680 ATACCCTCTTTGTCTTGTAATTTTTG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTAC 29738 || ||||| || ||||| ||| || | || ||| | || | |||||| ||| || || Sbjct 177768 ATCCCCTCCTTATCTTG-AATCTTAGCCTTCACATTATCAATAGTGTCTGAACTCTCCAC 177826 Query 29739 TTCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 || | || || ||||| || || || || |||||||| || ||||| Sbjct 177827 CTCCAATGTGATCGTTTTCCCCGTCAACGTCTTAACAAAGATTTGCAT 177874 Score = 114 bits (126), Expect = 1e-20 Identities = 155/216 (72%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 29571 ACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGA 29630 ||| || ||||| || | || || || || ||||||||||| || |||| |||||| Sbjct 178115 ACGGAGAACCAAGTGTAAAGTCGACTCCTTCTGAATGTTATAGTCTGCAAGTGTGCGACC 178174 Query 29631 ATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTT 29690 ||| || || || || || ||| | || | || |||||||| || |||||||||||||| Sbjct 178175 ATCTTCAAGCTGCTTCCCGGCAAAGATAAGCCTCTGCTGATCTGGAGGAATACCCTCTTT 178234 Query 29691 GTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTAT 29750 || || | || || || | || | || ||||| || || ||||| || || Sbjct 178235 ATCCTGGATCTTCGCCTTTACGTTGTCGATTGTATCAGAGCTCTCAACCTCAAGTGTAAT 178294 Query 29751 AGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 ||||| || || ||||| |||||||| |||||||| Sbjct 178295 GGTTTTACCGGTCAAGGTCTTAACAAAGATCTGCAT 178330 >seq1083 Length=90715 Score = 149 bits (164), Expect = 5e-31 Identities = 169/227 (74%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619 || || || ||||| ||||| | ||| || || || || || || ||||| || || || Sbjct 36349 CCGCCTCTTAAACGGAGCACGAGATGTAGAGTAGACTCCTTCTGTATGTTGTAGTCGGCT 36408 Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679 | |||||| ||| ||||||||||| |||||| | || | |||||||||||| ||||| Sbjct 36409 AAAGTGCGACCATCCTCGAGTTGTTTTCCAGCAAAGATGAGTCTTTGCTGATCTGGCGGG 36468 Query 29680 ATACCCTCTTTGTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACT 29739 || | ||||||||| |||| ||| ||| || | || | ||||| || ||| || Sbjct 36469 ATGCACTCTTTGTCCTGTATTTTCGATTTCACGTTGTCGATTGTGTCGGAGCCTTCCACC 36528 Query 29740 TCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 || || || || ||||| || |||| |||||| ||||| |||||||| Sbjct 36529 TCGAGGGTGATGGTTTTTCCGGTTAGGGTTTTCACAAAGATCTGCAT 36575 Score = 138 bits (152), Expect = 9e-28 Identities = 165/220 (75%), Gaps = 3/220 (1%) Strand=Plus/Plus Query 29569 AAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGA 29628 ||||| ||||| | ||||||||| || || ||||||||| ||||||| || | || ||| Sbjct 36129 AAACGAAGCACAAGATGAAGCGTAGACTCCTTTTGAATGGTATAATCTGCGAGAGTACGA 36188 Query 29629 GAATCATCGAGTTGTTTGCCAGCATATATCAATCTTT-GCTGATCCGGCGGAATACCCTC 29687 ||| ||||| ||||| || ||| | || | |||| | ||||| ||||| || || | Sbjct 36189 CCATCCTCGAGCTGTTTACCCGCAAAGATAAGCCTTTTGTTGATCTGGCGGGATCCCTTT 36248 Query 29688 TTTGTCTTGTAATTTTTGT-TTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAG 29746 ||| || |||| | || || || || | || | |||||||| ||| || ||||||| Sbjct 36249 TTTATCCTGTA-TCTTCGTCTTCACGTTATCAATTGTGTCAGAGTTTTCGACCTCAAGAG 36307 Query 29747 TTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 | || ||||||||||| | |||||| ||||| || ||||| Sbjct 36308 TAATGGTTTTGCCAGTGAGGGTTTTCACAAAGATTTGCAT 36347 Score = 109 bits (120), Expect = 4e-19 Identities = 140/194 (72%), Gaps = 12/194 (6%) Strand=Plus/Plus Query 29593 GATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAATCATCGAGTTGTTTGCCAGCA 29652 || ||||| || |||||||||||| ||| |||||| ||| || |||||||| |||||| Sbjct 35937 GACTCTTTCTGGATGTTATAATCCACAAGAGTGCGACCATCCTCTAGTTGTTTACCAGCA 35996 Query 29653 TATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTGTCTTGTAATTTTTGTTTGACA 29712 | || | ||||| || ||||||||||||||||| |||||||||| ||| || ||| Sbjct 35997 AAAATAAGCCTTTGTTGGTCCGGCGGAATACCCTCCTTGTCTTGTATCTTTGCCTTAACA 36056 Query 29713 GTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTA 29772 | || | ||| || | || | || || ||||| || ||||| || || Sbjct 36057 TTATCGATAGTATCTG--AGCT----------GGTAATCGTTTTACCCGTTAAAGTCTTG 36104 Query 29773 ACAAATATCTGCAT 29786 ||||| || ||||| Sbjct 36105 ACAAAGATTTGCAT 36118 >seq1646 Length=84127 Score = 123 bits (136), Expect = 2e-23 Identities = 159/217 (73%), Gaps = 2/217 (1%) Strand=Plus/Plus Query 29571 ACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGA 29630 ||| |||||||| || || || ||||| ||||| |||||||| || |||| ||| || Sbjct 61426 ACGGAGCACCAAGTGGAGGGTCGATTCCTTTTGGATGTTATAGTCAGCAAGGGTACGCCC 61485 Query 29631 ATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTT 29690 ||| || || ||||| || ||| | ||||| || ||||| || || ||||| |||||||| Sbjct 61486 ATCCTCAAGCTGTTTCCCGGCAAAGATCAACCTCTGCTGGTCTGGAGGAATTCCCTCTTT 61545 Query 29691 GTCTTGTAATTTTTG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTA 29749 |||||| ||| || | |||||| | || | ||||| || || || || | || | Sbjct 61546 GTCTTG-AATCTTGGCCTTGACATTATCAATGGTGTCGGAGCTCTCCACCTCCAAGGTGA 61604 Query 29750 TAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 | || ||||| |||| || || || || || ||||| Sbjct 61605 TCGTCTTGCCGGTTAGCGTCTTGACGAAGATTTGCAT 61641 Score = 104 bits (114), Expect = 2e-17 Identities = 152/215 (71%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 29572 CGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAA 29631 || || |||| || || ||||| || ||||| || || || || || | |||||| Sbjct 61883 CGGAGGACCAGGTGGAGGGTGGACTCCTTTTGGATATTGTAGTCAGCTAGGGTGCGGCCG 61942 Query 29632 TCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTG 29691 || ||||| ||||| || ||| | || | || ||||| || || || |||||||||||| Sbjct 61943 TCTTCGAGCTGTTTACCGGCAAAGATGAGCCTCTGCTGGTCTGGTGGGATACCCTCTTTG 62002 Query 29692 TCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATA 29751 ||||| | ||| |||||| | || | |||||||| ||| ||||| | || || Sbjct 62003 TCTTGGATTTTCGCCTTGACATTGTCAATGGTGTCAGAGCTTTCAACTTCCAAGGTAATG 62062 Query 29752 GTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 || || || || | || || ||||| || ||||| Sbjct 62063 GTCTTTCCGGTGAGAGTCTTTACAAAGATTTGCAT 62097 Score = 98.7 bits (108), Expect = 8e-16 Identities = 160/228 (70%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619 || || |||||||| || ||||| || || ||| || || || || || || || || Sbjct 62099 CCACCTCTCAAACGTAGGACCAAGTGTAGGGTGCTCTCCTTCTGGATATTGTAGTCGGCT 62158 Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679 | ||| ||| ||| || | || || || ||| | || | || ||||| || || ||| Sbjct 62159 AGGGTACGACCATCTTCTAACTGCTTTCCGGCAAAGATGAGCCTCTGCTGGTCTGGGGGA 62218 Query 29680 ATACCCTCTTTGTCTTGTAATTTTTG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTAC 29738 ||||||||||| || || |||||| | ||||| | || | || || || ||| || Sbjct 62219 ATACCCTCTTTATCCTG-AATTTTAGCCTTGACGTTGTCGATGGTATCGGAGCTTTCGAC 62277 Query 29739 TTCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 || ||||| || || ||||| || | || || ||||| |||||||| Sbjct 62278 CTCGAGAGTGATGGTCTTGCCGGTGAGAGTCTTCACAAAGATCTGCAT 62325 Score = 96.9 bits (106), Expect = 3e-15 Identities = 153/217 (71%), Gaps = 2/217 (1%) Strand=Plus/Plus Query 29571 ACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGA 29630 ||| || || | ||||| ||||| ||||| || ||||||||||| || | || | Sbjct 61198 ACGGAGGACAAGGTGAAGAGTGGACTCTTTCTGGATGTTATAATCGGCCAAAGTCCTCCC 61257 Query 29631 ATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTT 29690 ||| || | || ||||| ||| | ||||| || ||||| || || ||||| ||||| || Sbjct 61258 ATCTTCCAACTGCTTGCCTGCAAAGATCAACCTCTGCTGGTCTGGGGGAATGCCCTCCTT 61317 Query 29691 GTCTTGTAATTTTTG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTA 29749 ||| || |||||||| || || | || | || || || || || || | || | Sbjct 61318 GTCCTG-AATTTTTGCCTTAACGTTGTCAATGGTATCCGAGCTCTCCACCTCCAATGTGA 61376 Query 29750 TAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 | || || ||||| | ||| || || ||||||||||| Sbjct 61377 TGGTCTTCCCAGTAAGGGTCTTGACGAATATCTGCAT 61413 >seq187 Length=363338 Score = 123 bits (136), Expect = 2e-23 Identities = 157/216 (73%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 29571 ACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGA 29630 ||| |||||||| ||||| || ||||| || || ||||||||||| |||| ||| || Sbjct 21779 ACGGAGCACCAAGTGAAGGGTTGATTCCTTCTGGATGTTATAATCGGCAAGGGTACGTCC 21838 Query 29631 ATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTT 29690 ||| || || || || || ||| | ||||| || ||||||||||| ||||| || || || Sbjct 21839 ATCTTCAAGCTGCTTCCCGGCAAAGATCAACCTCTGCTGATCCGGGGGAATCCCTTCCTT 21898 Query 29691 GTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTAT 29750 ||| || | || ||||| | || | ||||||||| || || || | ||| || Sbjct 21899 GTCCTGGATCTTGGCCTTGACGTTGTCAATTGTGTCAGAACTCTCGACCTCCAAAGTGAT 21958 Query 29751 AGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 || ||||| || | ||| || || || || ||||| Sbjct 21959 CGTCTTGCCGGTGAGGGTCTTCACGAAGATTTGCAT 21994 Score = 123 bits (136), Expect = 2e-23 Identities = 157/216 (73%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 29571 ACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGA 29630 ||| |||||||| ||||| || ||||| || || |||||||| || |||| ||| || Sbjct 41384 ACGGAGCACCAAGTGAAGGGTCGATTCCTTCTGGATGTTATAGTCAGCAAGGGTACGCCC 41443 Query 29631 ATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTT 29690 ||| ||||| ||||| || ||| | ||||| || ||||||||||| ||||| || || || Sbjct 41444 ATCCTCGAGCTGTTTCCCGGCAAAGATCAACCTCTGCTGATCCGGGGGAATCCCTTCCTT 41503 Query 29691 GTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTAT 29750 ||| || | || ||||| | |||| ||||| || || || || | ||||| Sbjct 41504 GTCCTGGATCTTGGCCTTGACGTTGTCTATGGTGTCCGAGCTCTCCACCTCCAAGGTTAT 41563 Query 29751 AGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 || || ||||| | || || || || |||||||| Sbjct 41564 GGTCTTTCCAGTGAGAGTCTTCACGAAGATCTGCAT 41599 Score = 116 bits (128), Expect = 3e-21 Identities = 162/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619 || ||||| | ||| || |||| ||| || ||||| || || || ||||| || || ||| Sbjct 42057 CCACCCCTGAGACGGAGGACCAGATGGAGAGTGGACTCCTTCTGGATGTTGTAGTCGGCA 42116 Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679 | ||| || ||| ||||| ||||| || ||| | || | |||||||||||||| ||| Sbjct 42117 AGGGTACGTCCATCCTCGAGCTGTTTTCCGGCAAAGATGAGCCTTTGCTGATCCGGGGGA 42176 Query 29680 ATACCCTCTTTGTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACT 29739 || ||||| || || || | ||| ||||| | || | ||||| || || || Sbjct 42177 ATTCCCTCCTTATCCTGGATTTTGGCCTTGACGTTGTCGATGGTGTCGGAGCTCTCCACC 42236 Query 29740 TCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 || || || || || ||||| || | ||| || || || |||||||| Sbjct 42237 TCGAGGGTGATGGTCTTGCCCGTAAGGGTCTTGACGAAGATCTGCAT 42283 Score = 111 bits (122), Expect = 1e-19 Identities = 163/228 (71%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619 || |||||||| | ||||||| || || ||||| || || || ||||| || || ||| Sbjct 41829 CCACCCCTCAACCTGAGCACCAGGTGGAGAGTGGACTCCTTCTGGATGTTGTAGTCGGCA 41888 Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679 | ||| || || ||||| ||||| || ||| | || | |||||||||||||| ||| Sbjct 41889 AGGGTACGTCCGTCCTCGAGCTGTTTTCCGGCAAAGATGAGCCTTTGCTGATCCGGGGGA 41948 Query 29680 ATACCCTCTTTGTCTTGTAATTTTTG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTAC 29738 || || || ||||| || ||| || | ||||| | || | ||||| || || || Sbjct 41949 ATCCCTTCCTTGTCCTG-AATCTTGGCCTTGACGTTGTCGATGGTGTCGGAGCTCTCCAC 42007 Query 29739 TTCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 ||||| || || || || || || | ||| || || || |||||||| Sbjct 42008 CTCAAGGGTAATGGTCTTTCCCGTAAGGGTCTTGACGAAGATCTGCAT 42055 Score = 102 bits (112), Expect = 6e-17 Identities = 161/228 (71%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619 || |||||||| | |||||||| || || || || || || || ||||||||||| || Sbjct 29662 CCACCCCTCAACCTGAGCACCAAGTGGAGGGTAGACTCCTTCTGGATGTTATAATCAGCT 29721 Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679 | ||| || ||| || || ||||| || ||| | ||||| || ||||| || || ||| Sbjct 29722 AGGGTACGCCCATCCTCAAGCTGTTTCCCGGCAAAGATCAACCTCTGCTGGTCGGGGGGA 29781 Query 29680 ATACCCTCTTTGTCTTGTAATTTTTG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTAC 29738 ||||| || || || || ||| || | || || | || | ||||| || || || Sbjct 29782 ATACCTTCCTTATCCTG-AATCTTAGCCTTCACGTTATCGATCGTGTCGGAGCTCTCCAC 29840 Query 29739 TTCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 || | || ||||| || || || || ||||| || || || ||||| Sbjct 29841 CTCCAAGGTGATAGTCTTCCCTGTCAACGTTTTGACGAAGATTTGCAT 29888 Score = 100 bits (110), Expect = 2e-16 Identities = 161/229 (70%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619 || || |||||||| || ||||| || | || ||| || || || || || || || Sbjct 22452 CCACCTCTCAAACGTAGGACCAAGTGTAAGGTACTTTCCTTCTGGATATTGTAGTCAGCT 22511 Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679 | || ||| || ||||| ||||| || ||| | || | || ||||||||||| ||| Sbjct 22512 AGCGTACGACCGTCCTCGAGCTGTTTTCCGGCAAAGATGAGCCTCTGCTGATCCGGGGGA 22571 Query 29680 ATACCCTCTTTGTCTTGTAATTTTTG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTAC 29738 || || || ||||| || ||| || | ||| ||| | |||| ||||| || || || Sbjct 22572 ATCCCTTCCTTGTCCTG-AATCTTGGCTTTAACATTGTCTATGGTGTCGGAGCTCTCCAC 22630 Query 29739 TTCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCATT 29787 || | || || || || ||||| | || || ||||||||||||||| Sbjct 22631 CTCCAAGGTGATGGTCTTTCCAGTAAGCGTCTTGACAAATATCTGCATT 22679 Score = 96.9 bits (106), Expect = 3e-15 Identities = 153/217 (71%), Gaps = 2/217 (1%) Strand=Plus/Plus Query 29571 ACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGA 29630 ||| || ||||| || || || || || || ||||| ||||| || | |||||| Sbjct 22007 ACGTAGAACCAAGTGCAGGGTACTCTCCTTCTGGATGTTGTAATCAGCTAGGGTGCGGCC 22066 Query 29631 ATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTT 29690 || || || ||||| || || | || | || ||||||||||| ||||| ||||| || Sbjct 22067 GTCCTCCAGCTGTTTACCGGCGAAGATGAGCCTCTGCTGATCCGGGGGAATTCCCTCCTT 22126 Query 29691 GTCTTGTAATTTTTG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTA 29749 |||||| |||||| | ||||| | |||| ||||| || || || || | || | Sbjct 22127 GTCTTG-AATTTTGGCCTTGACGTTGTCTATGGTGTCGGAGCTCTCAACCTCCAAGGTGA 22185 Query 29750 TAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 | || ||||| || || || || ||||| || ||||| Sbjct 22186 TGGTCTTGCCGGTCAACGTCTTGACAAAGATTTGCAT 22222 Score = 96.9 bits (106), Expect = 3e-15 Identities = 153/217 (71%), Gaps = 2/217 (1%) Strand=Plus/Plus Query 29571 ACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGA 29630 ||| |||||||| || || || || || || || ||||| ||||| || | ||| || Sbjct 29445 ACGGAGCACCAAGTGCAGAGTAGACTCCTTCTGGATGTTGTAATCAGCTAGGGTACGCCC 29504 Query 29631 ATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTT 29690 ||| || || ||||| || ||| | ||||| || ||||| || || ||||||||||| || Sbjct 29505 ATCCTCAAGCTGTTTCCCGGCAAAGATCAACCTCTGCTGGTCAGGGGGAATACCCTCCTT 29564 Query 29691 GTCTTGTAATTTTTG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTA 29749 || || ||| || | || || | || | ||||| || || || || | || | Sbjct 29565 ATCCTG-AATCTTGGCCTTCACGTTATCGATCGTGTCGGAGCTCTCCACCTCCAAGGTGA 29623 Query 29750 TAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 |||| || ||||| | ||||| || || || ||||| Sbjct 29624 TAGTCTTCCCAGTCAGCGTTTTGACGAAGATTTGCAT 29660 Score = 96.9 bits (106), Expect = 3e-15 Identities = 151/216 (70%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 29571 ACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGA 29630 ||| || || | ||||| || || ||||| || ||||||||||| || | || | Sbjct 41156 ACGGAGGACAAGGTGAAGAGTAGACTCTTTCTGGATGTTATAATCAGCCAACGTCCTCCC 41215 Query 29631 ATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTT 29690 ||| || | ||||||||||| | ||||| || |||||||| || ||||||||||| || Sbjct 41216 ATCTTCCAACTGTTTGCCAGCGAAGATCAACCTCTGCTGATCTGGAGGAATACCCTCCTT 41275 Query 29691 GTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTAT 29750 || || | || || ||| | || | ||||| || || || || || || || Sbjct 41276 ATCCTGGATCTTAGCCTTCACATTATCGATGGTGTCCGAGCTCTCCACCTCCAGGGTGAT 41335 Query 29751 AGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 || || || || | ||| || ||||| |||||||| Sbjct 41336 GGTCTTCCCCGTAAGGGTCTTGACAAAGATCTGCAT 41371 Score = 91.5 bits (100), Expect = 1e-13 Identities = 152/217 (70%), Gaps = 2/217 (1%) Strand=Plus/Plus Query 29571 ACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGA 29630 ||| || || | ||||| || || ||||| || || |||||||| || | || | Sbjct 21551 ACGGAGGACAAGGTGAAGAGTAGACTCTTTCTGGATATTATAATCGGCCAAAGTCCTCCC 21610 Query 29631 ATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTT 29690 ||| || | || ||||| ||| | ||||| || ||||| ||||| ||||||||||| || Sbjct 21611 ATCTTCCAACTGCTTGCCGGCAAAGATCAACCTCTGCTGGTCCGGGGGAATACCCTCCTT 21670 Query 29691 GTCTTGTAATTTTTG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTA 29749 || || |||||| | || || | || | || ||||| || || || | || | Sbjct 21671 ATCCTG-AATTTTCGCCTTCACGTTATCGATCGTATCAGAGCTCTCCACCTCCAAGGTGA 21729 Query 29750 TAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 |||| || || || | ||| || ||||| |||||||| Sbjct 21730 TAGTCTTCCCGGTAAGGGTCTTGACAAAAATCTGCAT 21766 Score = 87.8 bits (96), Expect = 1e-12 Identities = 151/217 (70%), Gaps = 2/217 (1%) Strand=Plus/Plus Query 29571 ACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGA 29630 ||| || || | ||||| ||||| ||||| || ||||||||||| || | || | Sbjct 29217 ACGGAGGACAAGGTGAAGAGTGGACTCTTTCTGGATGTTATAATCGGCCAAAGTCCTCCC 29276 Query 29631 ATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTT 29690 ||| || | || ||||| ||| | ||||| || ||||| || || ||||||||||| || Sbjct 29277 ATCTTCCAACTGCTTGCCTGCAAAGATCAACCTCTGCTGGTCTGGGGGAATACCCTCCTT 29336 Query 29691 GTCTTGTAATTTTTG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTA 29749 || || ||| || | || || | || | || || ||| || || || | || | Sbjct 29337 ATCCTG-AATCTTGGCCTTCACGTTGTCGATCGTATCCGAACTCTCAACCTCCAAGGTGA 29395 Query 29750 TAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 |||| || || || | ||| || || || |||||||| Sbjct 29396 TAGTCTTCCCCGTAAGGGTCTTGACGAAAATCTGCAT 29432 >seq260 Length=279698 Score = 111 bits (122), Expect = 1e-19 Identities = 154/216 (71%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 29571 ACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGA 29630 ||| |||||||| ||||| || ||||| || || ||||||||||| |||| ||| || Sbjct 162103 ACGGAGCACCAAGTGAAGGGTCGATTCCTTCTGGATGTTATAATCTGCAAGGGTACGCCC 162162 Query 29631 ATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTT 29690 ||| || || ||||| || ||| | ||||| || ||||| || || ||||| || || || Sbjct 162163 ATCCTCAAGCTGTTTACCGGCAAAGATCAACCTCTGCTGGTCTGGGGGAATTCCTTCCTT 162222 Query 29691 GTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTAT 29750 ||| || | || ||||| | || | ||||| || || || || | ||| || Sbjct 162223 GTCCTGGATCTTGGCCTTGACGTTATCAATGGTGTCGGAGCTCTCGACCTCCAAAGTGAT 162282 Query 29751 AGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 || || || || | ||| || || || |||||||| Sbjct 162283 GGTCTTTCCTGTGAGGGTCTTCACGAAGATCTGCAT 162318 Score = 100 bits (110), Expect = 2e-16 Identities = 154/217 (71%), Gaps = 2/217 (1%) Strand=Plus/Plus Query 29571 ACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGA 29630 ||| || || | |||||| ||||| ||||| || |||||||||||||| | || | Sbjct 161875 ACGGAGGACAAGATGAAGAGTGGACTCTTTCTGGATGTTATAATCCGCCAAAGTCCTCCC 161934 Query 29631 ATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTT 29690 ||| || | || ||||| || | ||||| || ||||||||||| ||||| ||||| || Sbjct 161935 ATCCTCCAACTGCTTGCCGGCGAAGATCAACCTCTGCTGATCCGGGGGAATTCCCTCCTT 161994 Query 29691 GTCTTGTAATTTTTG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTA 29749 || || ||| || | || ||| | || | || || || || || || | || | Sbjct 161995 ATCCTG-AATCTTGGCCTTCACATTGTCAATGGTATCCGAGCTCTCCACCTCCAAGGTGA 162053 Query 29750 TAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 | || || || || | ||| || |||||||||||||| Sbjct 162054 TGGTCTTCCCCGTAAGGGTCTTGACAAATATCTGCAT 162090 >seq1470 Length=49555 Score = 105 bits (116), Expect = 5e-18 Identities = 159/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619 || |||||||| | |||||||| || || || || || || || ||||| || || ||| Sbjct 31298 CCACCCCTCAACCTGAGCACCAAGTGGAGGGTAGACTCCTTCTGGATGTTGTAGTCGGCA 31239 Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679 | || || || || || ||||| || ||| | ||||| || ||||| || || ||| Sbjct 31238 AGRGTACGTCCGTCCTCAAGCTGTTTCCCGGCAAAGATCAACCTCTGCTGGTCTGGGGGA 31179 Query 29680 ATACCCTCTTTGTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACT 29739 || || || ||||| || | || ||||| | || | |||||| ||| ||| || Sbjct 31178 ATCCCTTCCTTGTCCTGGATCTTGGCCTTGACGTTATCAATAGTGTCGGAACTTTCGACC 31119 Query 29740 TCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 || | ||| || || || || || | || || || ||||||||||| Sbjct 31118 TCCAAAGTGATGGTCTTTCCCGTAAGAGTCTTGACGAATATCTGCAT 31072 >seq771 Length=161796 Score = 102 bits (112), Expect = 6e-17 Identities = 137/191 (72%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 29596 TCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATAT 29655 || || || ||||| ||||| || | ||| || ||| || || ||||| || ||| || Sbjct 43460 TCCTTCTGGATGTTGTAATCGGCTACGGTACGCCCATCCTCAAGCTGTTTCCCGGCAAAT 43401 Query 29656 ATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTGTCTTGTAATTTTTGTTTGACAGTT 29715 ||||| || ||||| || | ||||| |||||||||||||| | ||| ||||| | Sbjct 43400 ATCAACCTCTGCTGGTCTGAGGGAATTCCCTCTTTGTCTTGGATTTTAGCCTTGACGTTC 43341 Query 29716 TCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACA 29775 || | ||||| ||| || ||||| | ||||| || || || || | ||| || || Sbjct 43340 TCGATGGTGTCGGAACTCTCGACTTCCAAAGTTACGGTCTTTCCTGTGAGGGTATTCACG 43281 Query 29776 AATATCTGCAT 29786 || |||||||| Sbjct 43280 AAGATCTGCAT 43270 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 385178091814596