Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Primula_20veris_20[genbank_20GCA_5F000788445.1_202014-12-03] 8,756 sequences; 309,692,940 total letters Query= NC_026268.1 Length=139132 Score E Sequences producing significant alignments: (Bits) Value seq1083 113 4e-20 seq1646 89.7 5e-13 >seq1083 Length=90715 Score = 113 bits (124), Expect = 4e-20 Identities = 161/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 25175 ATGCAAGTGTTTGTAAAAACATTAACCGGAAAATCGATCACGATCGAAGTCGAAGCCAAC 25234 ||||| | ||||| ||||| ||||||||||| | ||||| |||| || |||| | | Sbjct 36575 ATGCAGATCTTTGTGAAAACCCTAACCGGAAAAACCATCACCCTCGAGGTGGAAGGCTCC 36516 Query 25235 GATACTATCGAGCAAGTAAAACAAAAAATTACCGATAAAGAGGGTATACCGCCCGATCAG 25294 || || ||||| | || ||| ||||| || |||||| | || ||||| |||||| Sbjct 36515 GACACAATCGACAACGTGAAATCGAAAATACAGGACAAAGAGTGCATCCCGCCAGATCAG 36456 Query 25295 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAATGTCAGCGATTACAAT 25354 ||||||||||| | | || ||||||||||| |||| | | | | | ||| ||||| Sbjct 36455 CAAAGACTCATCTTTGCTGGAAAACAACTCGAGGATGGTCGCACTTTAGCCGACTACAAC 36396 Query 25355 ATTCAAAAAGAATCCACCATTCATTTAGTGTTAAGATTGAGAGGAGG 25401 || || || || || || | ||| | ||| | | || ||||| || Sbjct 36395 ATACAGAAGGAGTCTACTCTACATCTCGTGCTCCGTTTAAGAGGCGG 36349 >seq1646 Length=84127 Score = 89.7 bits (98), Expect = 5e-13 Identities = 156/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 25175 ATGCAAGTGTTTGTAAAAACATTAACCGGAAAATCGATCACGATCGAAGTCGAAGCCAAC 25234 ||||| | ||||| || || | ||||| || | ||||| |||| |||||| | | Sbjct 62325 ATGCAGATCTTTGTGAAGACTCTCACCGGCAAGACCATCACTCTCGAGGTCGAAAGCTCC 62266 Query 25235 GATACTATCGAGCAAGTAAAACAAAAAATTACCGATAAAGAGGGTATACCGCCCGATCAG 25294 ||||| ||||| | || || |||||| |||||||||||||| || || || ||| Sbjct 62265 GATACCATCGACAACGTCAAGGCTAAAATTCAGGATAAAGAGGGTATTCCCCCAGACCAG 62206 Query 25295 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAATGTCAGCGATTACAAT 25354 || || ||||| | | ||| || || | ||||||| | | | | ||| |||||| Sbjct 62205 CAGAGGCTCATCTTTGCCGGAAAGCAGTTAGAAGATGGTCGTACCCTAGCCGACTACAAT 62146 Query 25355 ATTCAAAAAGAATCCACCATTCATTTAGTGTTAAGATTGAGAGGAGG 25401 || || || || |||| | || || || || | |||||||| || Sbjct 62145 ATCCAGAAGGAGAGCACCCTACACTTGGTCCTACGTTTGAGAGGTGG 62099 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 445045684417920