Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Primula_20veris_20[genbank_20GCA_5F000788445.1_202014-12-03] 8,756 sequences; 309,692,940 total letters Query= NC_028104.1 Length=73689 Score E Sequences producing significant alignments: (Bits) Value seq1558 86.0 3e-12 >seq1558 Length=51861 Score = 86.0 bits (94), Expect = 3e-12 Identities = 142/202 (70%), Gaps = 6/202 (3%) Strand=Plus/Plus Query 65087 CGTGTTCCAAACTGACCATTTGGCATTAATAAATTAATATTGTTTGAACCAATAAAATTC 65146 |||| ||||| ||||| ||||| || || |||||||| || || | | |||| Sbjct 36596 CGTGAACCAAATTGACCTTTTGGTTGGAAAAAGTTAATATTATTGCTTCCCACATAATTT 36655 Query 65147 TGAGCCATTCCGATAAT--TGCT-GCATTTAAACTCGCTTCACCGTGATGATATCCTGAA 65203 |||||||| || ||||| |||| ||| | ||| | || || |||||||| ||||| Sbjct 36656 TGAGCCATGCCAATAATGGTGCTAGCA---AGACTGGTCTCGCCATGATGATAAGCTGAA 36712 Query 65204 TGTTCAGAGACATATCCACTAAATTGAGCAACTTTTATTTCCGTTGTTAAATTCTTTTTA 65263 |||||||| ||||| ||| ||| ||||||| || || || | || || ||| Sbjct 36713 TGTTCAGACACATAACCAGCAAACTGAGCAATCTTAGCCTCTTTTCTAAAGTTGCGCTTA 36772 Query 65264 AATGCAGAATACAATATTTTCC 65285 |||||| || | | ||||||| Sbjct 36773 AATGCACAAAATAGAATTTTCC 36794 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 235654849703400